BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0119.0024.p (364 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771085.1| cystathionine beta lyase [Bradyrhizobium japoni... 629 e-178 ref|YP_001205899.1| cystathionine beta-lyase [Bradyrhizobium sp.... 607 e-172 ref|YP_001239898.1| cystathionine beta-lyase [Bradyrhizobium sp.... 605 e-171 ref|YP_486526.1| cystathionine beta-lyase [Rhodopseudomonas palu... 592 e-167 ref|ZP_08629914.1| cystathionine beta-lyase [Bradyrhizobiaceae b... 589 e-166 >ref|NP_771085.1| cystathionine beta lyase [Bradyrhizobium japonicum USDA 110] dbj|BAC49710.1| cystathionine beta lyase [Bradyrhizobium japonicum USDA 110] Length = 394 Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust. Identities = 305/394 (77%), Positives = 329/394 (83%), Gaps = 35/394 (8%) Query: 5 DGSTPSHPQQAATRLVTAGRDTKAQKGFVNPPVFHGSTVLYPTAEDLHAHRAEFTYGRHG 64 D S PS QQA TRLVT+GRDTKAQKGFVNPPVFHGSTVLYPTAEDLHAHR EFTYGRHG Sbjct: 2 DSSHPSQ-QQAETRLVTSGRDTKAQKGFVNPPVFHGSTVLYPTAEDLHAHRGEFTYGRHG 60 Query: 65 SPTTRALQDVLMALEGPQCAGVGLAPSGLAAISTTLLAVLKAGEHLLVCDNAYRPTRNFC 124 +PTTRA QD LMALEGPQCAGVG+ PSGL+AISTTLL+VLK G+H+LVCDN YRP+RNFC Sbjct: 61 TPTTRAFQDTLMALEGPQCAGVGIVPSGLSAISTTLLSVLKTGDHILVCDNVYRPSRNFC 120 Query: 125 DNMLKRYGIETSYFDPLVDAGIETLFKPNTRAVLIEAPGSQTFEMPDVRAISAVAHARGA 184 + ML RYG+ET+YFDPL+ AGI+ LFKPNTRAVL+EAPGSQ+FEMPD+RAI+ VAHAR A Sbjct: 121 NGMLARYGVETTYFDPLIGAGIDKLFKPNTRAVLVEAPGSQSFEMPDIRAIAEVAHARDA 180 Query: 185 LMIDDNTWATPLYHRSLEQGVDISMQAATKYIGGHSDIMFGTIAANAKAWPLIQEAIRLL 244 L+IDDNTWATPLYHRSLEQGVDISMQAATKYIGGHSDIMFGTI+ANAKAWP I E IRLL Sbjct: 181 LVIDDNTWATPLYHRSLEQGVDISMQAATKYIGGHSDIMFGTISANAKAWPQIAEGIRLL 240 Query: 245 GVCAGPDDVYLALRX----------------------------------ALDTDPGHAIW 270 GVCAGPDDV+LALR L+TDPGHAIW Sbjct: 241 GVCAGPDDVFLALRGLRTLSVRLAQHHRSGLDMARWLASRPEVARVLHPGLETDPGHAIW 300 Query: 271 KRDFTGASGLFSIVLKPVPQTAVDAMLNALTLFGMGFSWGGFESLAIPFDCSDYRTATKW 330 KRDFTGASGLFSIVLKP PQ AVD MLN L LFGMGFSWGGFESLAIPFDC YRTATKW Sbjct: 301 KRDFTGASGLFSIVLKPAPQKAVDTMLNTLKLFGMGFSWGGFESLAIPFDCDGYRTATKW 360 Query: 331 SPGGPTLRLHIGLENLDDLKADLDRGFAALKAAL 364 +PGGPTLRLHIGLE+ DDLKADLDRGFAALK A+ Sbjct: 361 APGGPTLRLHIGLESTDDLKADLDRGFAALKTAM 394 >ref|YP_001205899.1| cystathionine beta-lyase [Bradyrhizobium sp. ORS 278] emb|CAL77674.1| cystathionine beta-lyase, PLP-dependent (beta-cystathionase) [Bradyrhizobium sp. ORS 278] Length = 397 Score = 607 bits (1566), Expect = e-172, Method: Compositional matrix adjust. Identities = 295/397 (74%), Positives = 324/397 (81%), Gaps = 34/397 (8%) Query: 1 MTSSDGSTPSHPQQAATRLVTAGRDTKAQKGFVNPPVFHGSTVLYPTAEDLHAHRAEFTY 60 M SS+ + Q TRLVT GRDTKAQ GFVNPPV HGSTVLYPTAEDLHAHR EF Y Sbjct: 1 MASSNDPASAVRQNVETRLVTVGRDTKAQHGFVNPPVVHGSTVLYPTAEDLHAHRGEFQY 60 Query: 61 GRHGSPTTRALQDVLMALEGPQCAGVGLAPSGLAAISTTLLAVLKAGEHLLVCDNAYRPT 120 GRHG+PTT+ALQ LMALEGPQCAGVG+APSGL AISTTLL+VLKAG+H+LVCD+ YRPT Sbjct: 61 GRHGTPTTKALQQALMALEGPQCAGVGIAPSGLGAISTTLLSVLKAGDHVLVCDSIYRPT 120 Query: 121 RNFCDNMLKRYGIETSYFDPLVDAGIETLFKPNTRAVLIEAPGSQTFEMPDVRAISAVAH 180 RNFC+ ML RYG+ET+YFDPL+ GIE L KPNTRAV++EAPGSQ+FEMPD+ AI+AVAH Sbjct: 121 RNFCNGMLARYGVETTYFDPLIGTGIEQLLKPNTRAVVVEAPGSQSFEMPDIPAIAAVAH 180 Query: 181 ARGALMIDDNTWATPLYHRSLEQGVDISMQAATKYIGGHSDIMFGTIAANAKAWPLIQEA 240 A GAL+IDDNTWATPLYHRSL+QGVDISMQAATKYIGGHSDIMFGTI+ANAKAWPLI E Sbjct: 181 AHGALVIDDNTWATPLYHRSLDQGVDISMQAATKYIGGHSDIMFGTISANAKAWPLISEG 240 Query: 241 IRLLGVCAGPDDVYLALRX----------------------------------ALDTDPG 266 IRLLGVCAGPDDV+LALR AL++ PG Sbjct: 241 IRLLGVCAGPDDVFLALRGVRTLGVRLAQHHRSGLEMARWLAARPEVIEVLHPALESHPG 300 Query: 267 HAIWKRDFTGASGLFSIVLKPVPQTAVDAMLNALTLFGMGFSWGGFESLAIPFDCSDYRT 326 HAIWKRDFTGASGLFSIVL+P PQ AVDAML+ LTLFGMG+SWGGFESLAIPFDCS YRT Sbjct: 301 HAIWKRDFTGASGLFSIVLQPKPQAAVDAMLDTLTLFGMGYSWGGFESLAIPFDCSSYRT 360 Query: 327 ATKWSPGGPTLRLHIGLENLDDLKADLDRGFAALKAA 363 AT W+PGGPTLRLHIGLEN +DLKADLDRGFAA AA Sbjct: 361 ATSWAPGGPTLRLHIGLENTEDLKADLDRGFAAFNAA 397 >ref|YP_001239898.1| cystathionine beta-lyase [Bradyrhizobium sp. BTAi1] gb|ABQ35992.1| cystathionine beta-lyase [Bradyrhizobium sp. BTAi1] Length = 397 Score = 605 bits (1561), Expect = e-171, Method: Compositional matrix adjust. Identities = 293/397 (73%), Positives = 327/397 (82%), Gaps = 34/397 (8%) Query: 1 MTSSDGSTPSHPQQAATRLVTAGRDTKAQKGFVNPPVFHGSTVLYPTAEDLHAHRAEFTY 60 M S + + Q TRL+TAGRDTKAQ GFVNP VFHGSTVLYPTA+DLHAHR EF Y Sbjct: 1 MASKNDPAAAVRQNVGTRLITAGRDTKAQHGFVNPAVFHGSTVLYPTADDLHAHRGEFQY 60 Query: 61 GRHGSPTTRALQDVLMALEGPQCAGVGLAPSGLAAISTTLLAVLKAGEHLLVCDNAYRPT 120 GRHG+PTT+ALQ VLM LEGPQCAGVG+APSGLAAISTTLL+VLKAG+H+LVCD+ YRPT Sbjct: 61 GRHGTPTTKALQQVLMELEGPQCAGVGIAPSGLAAISTTLLSVLKAGDHVLVCDSIYRPT 120 Query: 121 RNFCDNMLKRYGIETSYFDPLVDAGIETLFKPNTRAVLIEAPGSQTFEMPDVRAISAVAH 180 RNFC+ ML RYG+ET+YFDPLV +GIE L KPNTRAV++EAPGSQ+FEMPD+ AI+AVAH Sbjct: 121 RNFCNGMLARYGVETTYFDPLVGSGIEQLLKPNTRAVVVEAPGSQSFEMPDIPAIAAVAH 180 Query: 181 ARGALMIDDNTWATPLYHRSLEQGVDISMQAATKYIGGHSDIMFGTIAANAKAWPLIQEA 240 A GAL+IDDNTWATPLYHRSLEQGVDISMQAATKYIGGHSDIMFGTI+AN KAWPLI E Sbjct: 181 AHGALVIDDNTWATPLYHRSLEQGVDISMQAATKYIGGHSDIMFGTISANEKAWPLIAEG 240 Query: 241 IRLLGVCAGPDDVYLALRX----------------------------------ALDTDPG 266 IRLLGVCAGPDDV+LALR AL++ PG Sbjct: 241 IRLLGVCAGPDDVFLALRGVRTLGVRLAQHHRSGLEMARWLAARPEVIDVLHPALESHPG 300 Query: 267 HAIWKRDFTGASGLFSIVLKPVPQTAVDAMLNALTLFGMGFSWGGFESLAIPFDCSDYRT 326 HAIWKRDFTGASGLFSIVL+P PQ AVDAML+ LTLFGMG+SWGGFESLAIPFDC+ YRT Sbjct: 301 HAIWKRDFTGASGLFSIVLQPRPQAAVDAMLDTLTLFGMGYSWGGFESLAIPFDCASYRT 360 Query: 327 ATKWSPGGPTLRLHIGLENLDDLKADLDRGFAALKAA 363 AT+W+PGGPTLRLHIGLEN++DLKADL+RGFAA AA Sbjct: 361 ATRWAPGGPTLRLHIGLENVEDLKADLERGFAAFNAA 397 >ref|YP_486526.1| cystathionine beta-lyase [Rhodopseudomonas palustris HaA2] gb|ABD07615.1| cystathionine beta-lyase [Rhodopseudomonas palustris HaA2] Length = 398 Score = 592 bits (1525), Expect = e-167, Method: Compositional matrix adjust. Identities = 286/397 (72%), Positives = 320/397 (80%), Gaps = 34/397 (8%) Query: 1 MTSSDGSTPSHPQQAATRLVTAGRDTKAQKGFVNPPVFHGSTVLYPTAEDLHAHRAEFTY 60 M SSD P+ P TRLVT+GRDTKAQKGFVNPPV GSTVLYPTAEDLHAHR E++Y Sbjct: 1 MNSSDHGDPASPLSPQTRLVTSGRDTKAQKGFVNPPVVRGSTVLYPTAEDLHAHRGEYSY 60 Query: 61 GRHGSPTTRALQDVLMALEGPQCAGVGLAPSGLAAISTTLLAVLKAGEHLLVCDNAYRPT 120 GRHG+PTTRALQ LMALEGPQCAGVGLAPSG++AIST LLAVLKAG+H+LVCDNAYRPT Sbjct: 61 GRHGTPTTRALQQALMALEGPQCAGVGLAPSGVSAISTALLAVLKAGDHVLVCDNAYRPT 120 Query: 121 RNFCDNMLKRYGIETSYFDPLVDAGIETLFKPNTRAVLIEAPGSQTFEMPDVRAISAVAH 180 R FCD MLKRYGIETSYFDPL+ AGI KPNT V++EAPGSQ+FEMPD+ AI+ VAH Sbjct: 121 RLFCDQMLKRYGIETSYFDPLIGAGIAAHLKPNTAVVMVEAPGSQSFEMPDIPAIAEVAH 180 Query: 181 ARGALMIDDNTWATPLYHRSLEQGVDISMQAATKYIGGHSDIMFGTIAANAKAWPLIQEA 240 A GAL+IDDNTWATPLYHRSL+QGVDIS+QA TKYIGGHSDIMFGTIAAN +AWP + E Sbjct: 181 AHGALVIDDNTWATPLYHRSLDQGVDISIQAGTKYIGGHSDIMFGTIAANKRAWPQVAEG 240 Query: 241 IRLLGVCAGPDDVYLALRX----------------------------------ALDTDPG 266 IR LGVCAGPDDV+LALR AL++DPG Sbjct: 241 IRQLGVCAGPDDVFLALRGLRTLAVRLAQHQQSGLEMARWLGERPEVQRVLHPALESDPG 300 Query: 267 HAIWKRDFTGASGLFSIVLKPVPQTAVDAMLNALTLFGMGFSWGGFESLAIPFDCSDYRT 326 HAIWKRDFTGASGLFSIVL+P PQ AVDA+L+ + LFGMG+SWGGFESLAIPFDC+ YR+ Sbjct: 301 HAIWKRDFTGASGLFSIVLQPAPQKAVDALLDTVKLFGMGYSWGGFESLAIPFDCTTYRS 360 Query: 327 ATKWSPGGPTLRLHIGLENLDDLKADLDRGFAALKAA 363 AT+W+PGGP LRLHIGLE+ DDLKADL+RGFAA AA Sbjct: 361 ATQWNPGGPALRLHIGLESTDDLKADLERGFAAFNAA 397 >ref|ZP_08629914.1| cystathionine beta-lyase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07283.1| cystathionine beta-lyase [Bradyrhizobiaceae bacterium SG-6C] Length = 398 Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust. Identities = 282/395 (71%), Positives = 322/395 (81%), Gaps = 34/395 (8%) Query: 3 SSDGSTPSHPQQAATRLVTAGRDTKAQKGFVNPPVFHGSTVLYPTAEDLHAHRAEFTYGR 62 S + + PS P T LVTAGRDT AQKGF+NPP+ GSTVLYPTAEDLHAHR EF YGR Sbjct: 2 SRNDNRPSTPLDPQTELVTAGRDTVAQKGFINPPIVRGSTVLYPTAEDLHAHRGEFQYGR 61 Query: 63 HGSPTTRALQDVLMALEGPQCAGVGLAPSGLAAISTTLLAVLKAGEHLLVCDNAYRPTRN 122 HG+PTT+ALQ LMALEGP CAGVGLAPSG+ AIST LLA+LKAG+H+LV D+ YRPTRN Sbjct: 62 HGTPTTKALQQALMALEGPNCAGVGLAPSGVGAISTALLAILKAGDHVLVIDSVYRPTRN 121 Query: 123 FCDNMLKRYGIETSYFDPLVDAGIETLFKPNTRAVLIEAPGSQTFEMPDVRAISAVAHAR 182 FCD++LKRYG+ET+YFDP++ AGIE LF+PNTRAVL+EAPGSQ+FEMPD+ AI+AVAHA+ Sbjct: 122 FCDSLLKRYGVETTYFDPMIGAGIEKLFRPNTRAVLVEAPGSQSFEMPDIPAIAAVAHAK 181 Query: 183 GALMIDDNTWATPLYHRSLEQGVDISMQAATKYIGGHSDIMFGTIAANAKAWPLIQEAIR 242 GA+++DDNTWATPL+HRSL+QGVDIS+QA TKYIGGHSDIMFGTI+ANA WPL+ EAIR Sbjct: 182 GAIVLDDNTWATPLFHRSLDQGVDISIQAGTKYIGGHSDIMFGTISANAATWPLMTEAIR 241 Query: 243 LLGVCAGPDDVYLALRX----------------------------------ALDTDPGHA 268 LLGVCAGPDDV+LALR AL++DPGHA Sbjct: 242 LLGVCAGPDDVFLALRGLRTLAVRLAHHQKSGLEMARWFAERPEVLRVIHPALESDPGHA 301 Query: 269 IWKRDFTGASGLFSIVLKPVPQTAVDAMLNALTLFGMGFSWGGFESLAIPFDCSDYRTAT 328 IWKRDFTGASGLFSIVLKP + AVDA L+ +TLFGMG+SWGGFESL IPFDCS YRTAT Sbjct: 302 IWKRDFTGASGLFSIVLKPASKKAVDAFLDTVTLFGMGYSWGGFESLVIPFDCSSYRTAT 361 Query: 329 KWSPGGPTLRLHIGLENLDDLKADLDRGFAALKAA 363 W+PGGPTLR HIGLENLDDLKADL+RGF ALKAA Sbjct: 362 TWNPGGPTLRFHIGLENLDDLKADLERGFEALKAA 396