BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0119.0017.p (160 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771095.1| outer-membrane immunogenic protein [Bradyrhizob... 280 5e-74 ref|YP_577323.1| RND efflux system, outer membrane lipoprotein, ... 274 3e-72 ref|YP_001239907.1| multidrug efflux system outer membrane subun... 266 7e-70 ref|YP_532426.1| RND efflux system outer membrane lipoprotein No... 265 2e-69 ref|YP_001205890.1| multidrug efflux system outer membrane subun... 264 3e-69 >ref|NP_771095.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] dbj|BAC49720.1| blr4455 [Bradyrhizobium japonicum USDA 110] Length = 494 Score = 280 bits (716), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 133/159 (83%), Positives = 150/159 (94%) Query: 2 TGTGGYQSQALVSLFQPHAAFFNLVGSMTQPIFDGGRILGNFEYTKAKQDELLQTYRKTV 61 TG GGYQS ALVSLFQPHAAFF LVGS TQPIFDGG+ILGNFE+ KA+QDELLQTYRKT+ Sbjct: 336 TGNGGYQSSALVSLFQPHAAFFQLVGSATQPIFDGGKILGNFEFAKARQDELLQTYRKTI 395 Query: 62 VQSFTDVDNALVAIRETTRRLQLQRDVLSSSRRAFDLAEQQLKAGTADIVTVLNTQLTLF 121 VQ+F DVDNAL +I++TT +LQLQRDV+++SRRAFDL+EQQL+AGTADIVTVLNTQLTLF Sbjct: 396 VQAFADVDNALFSIKQTTIKLQLQRDVVTASRRAFDLSEQQLRAGTADIVTVLNTQLTLF 455 Query: 122 QAEDAYSQAQLARLLAIVSLYQALGGGWEPKMERPVDAL 160 QAEDA SQAQLARLLAIVSLYQALGGGWEP+ME+PV+AL Sbjct: 456 QAEDALSQAQLARLLAIVSLYQALGGGWEPRMEKPVNAL 494 >ref|YP_577323.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter hamburgensis X14] gb|ABE62863.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter hamburgensis X14] Length = 494 Score = 274 bits (701), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 131/159 (82%), Positives = 147/159 (92%) Query: 2 TGTGGYQSQALVSLFQPHAAFFNLVGSMTQPIFDGGRILGNFEYTKAKQDELLQTYRKTV 61 TG GGYQS ALV+LFQP AAFF+L G +TQPIFDGGRILGNFEYTKAKQDELLQTYRKTV Sbjct: 336 TGQGGYQSSALVALFQPQAAFFSLAGGLTQPIFDGGRILGNFEYTKAKQDELLQTYRKTV 395 Query: 62 VQSFTDVDNALVAIRETTRRLQLQRDVLSSSRRAFDLAEQQLKAGTADIVTVLNTQLTLF 121 V +F DVDNAL+AIR+TT RL+LQR V+++SRRAF+L EQQL+AGTADIVTVLNTQLTLF Sbjct: 396 VSAFADVDNALIAIRQTTERLRLQRKVVTASRRAFELGEQQLRAGTADIVTVLNTQLTLF 455 Query: 122 QAEDAYSQAQLARLLAIVSLYQALGGGWEPKMERPVDAL 160 QAED+ SQAQLARLLA+VSLYQALGGGWEPK+ERP +AL Sbjct: 456 QAEDSLSQAQLARLLAVVSLYQALGGGWEPKIERPGNAL 494 >ref|YP_001239907.1| multidrug efflux system outer membrane subunit [Bradyrhizobium sp. BTAi1] gb|ABQ36001.1| putative multidrug efflux system, outer membrane subunit (efflux pump component) (TolC family) [Bradyrhizobium sp. BTAi1] Length = 507 Score = 266 bits (680), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 129/159 (81%), Positives = 145/159 (91%) Query: 2 TGTGGYQSQALVSLFQPHAAFFNLVGSMTQPIFDGGRILGNFEYTKAKQDELLQTYRKTV 61 TG GGYQS ALVSLFQPHAAFF+L GS+TQPIFDGGRILGNFE KA+QDELLQTYRKTV Sbjct: 349 TGNGGYQSAALVSLFQPHAAFFSLAGSLTQPIFDGGRILGNFENAKARQDELLQTYRKTV 408 Query: 62 VQSFTDVDNALVAIRETTRRLQLQRDVLSSSRRAFDLAEQQLKAGTADIVTVLNTQLTLF 121 +Q+FTDV+NAL AI++TT RLQLQR V+++SRRAF+L+EQQL+AGTADIVTVLNTQLTLF Sbjct: 409 IQAFTDVNNALFAIKQTTIRLQLQRQVVAASRRAFELSEQQLRAGTADIVTVLNTQLTLF 468 Query: 122 QAEDAYSQAQLARLLAIVSLYQALGGGWEPKMERPVDAL 160 QAEDA QAQLARL A VSLYQALGGGWEP+ME+ DAL Sbjct: 469 QAEDALWQAQLARLQAFVSLYQALGGGWEPRMEKSADAL 507 >ref|YP_532426.1| RND efflux system outer membrane lipoprotein NodT [Rhodopseudomonas palustris BisB18] gb|ABD88107.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris BisB18] Length = 484 Score = 265 bits (676), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 127/159 (79%), Positives = 142/159 (89%) Query: 2 TGTGGYQSQALVSLFQPHAAFFNLVGSMTQPIFDGGRILGNFEYTKAKQDELLQTYRKTV 61 TG GGYQS AL SLF PHAAF+N+ +TQPIFDGGRIL NFEY +A+QDELLQTYRKTV Sbjct: 326 TGQGGYQSAALASLFTPHAAFYNVAAGLTQPIFDGGRILANFEYNQARQDELLQTYRKTV 385 Query: 62 VQSFTDVDNALVAIRETTRRLQLQRDVLSSSRRAFDLAEQQLKAGTADIVTVLNTQLTLF 121 V +F DVDNAL +IR+ T RL+LQR VL SSRRAF+LAEQQL+AGTADIVTVLNTQLTLF Sbjct: 386 VSAFADVDNALESIRQNTERLRLQRVVLESSRRAFNLAEQQLRAGTADIVTVLNTQLTLF 445 Query: 122 QAEDAYSQAQLARLLAIVSLYQALGGGWEPKMERPVDAL 160 QAEDA SQAQLARLLAIVSLYQALGGGW+P++ERPV+AL Sbjct: 446 QAEDALSQAQLARLLAIVSLYQALGGGWQPRLERPVNAL 484 >ref|YP_001205890.1| multidrug efflux system outer membrane subunit [Bradyrhizobium sp. ORS 278] emb|CAL77665.1| putative multidrug efflux system, outer membrane subunit (efflux pump component) (TolC family) [Bradyrhizobium sp. ORS 278] Length = 507 Score = 264 bits (675), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 127/159 (79%), Positives = 145/159 (91%) Query: 2 TGTGGYQSQALVSLFQPHAAFFNLVGSMTQPIFDGGRILGNFEYTKAKQDELLQTYRKTV 61 TG GGYQS ALVSLFQPHAAFF+L GS+TQPIFDGG+ILGNFE KA+QDELLQTYRKTV Sbjct: 349 TGNGGYQSAALVSLFQPHAAFFSLAGSLTQPIFDGGKILGNFENAKARQDELLQTYRKTV 408 Query: 62 VQSFTDVDNALVAIRETTRRLQLQRDVLSSSRRAFDLAEQQLKAGTADIVTVLNTQLTLF 121 +Q+FTDV+NAL +I++TT RLQLQR+V+++SRRAF L+EQQL+AGTADIVTVLNTQLTLF Sbjct: 409 IQAFTDVNNALFSIKQTTIRLQLQREVVAASRRAFQLSEQQLRAGTADIVTVLNTQLTLF 468 Query: 122 QAEDAYSQAQLARLLAIVSLYQALGGGWEPKMERPVDAL 160 QAEDA QAQLARL A VSLYQALGGGWEP+ME+ DAL Sbjct: 469 QAEDALWQAQLARLQAFVSLYQALGGGWEPRMEKSADAL 507