BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0119.0016.p (485 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771096.1| efflux system protein [Bradyrhizobium japonicum... 692 0.0 ref|YP_001239908.1| multidrug resistance protein mdtA [Bradyrhiz... 673 0.0 ref|YP_001205889.1| multidrug ABC transporter [Bradyrhizobium sp... 666 0.0 ref|YP_569700.1| secretion protein HlyD [Rhodopseudomonas palust... 617 e-174 ref|YP_577322.1| secretion protein HlyD [Nitrobacter hamburgensi... 612 e-173 >ref|NP_771096.1| efflux system protein [Bradyrhizobium japonicum USDA 110] dbj|BAC49721.1| blr4456 [Bradyrhizobium japonicum USDA 110] Length = 461 Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/477 (76%), Positives = 401/477 (84%), Gaps = 23/477 (4%) Query: 1 MLFKPDSTDDEKRTAPRKRSLLSRLLGRMVSLLITLVILGGLGYLGWLAF--QPKQNGGG 58 MLFKPD D K RK S G + L+TL ILGGLGYLGW + QP+Q G Sbjct: 1 MLFKPDKKVDAKAGTVRKSSR-----GGFILTLVTLAILGGLGYLGWTVWHQQPQQANGR 55 Query: 59 GRGAGGRPDLPVPVLAATPHVQDVPVYLDGVGSVRALNTVTVRSQVDGKLIAVNFVEGQD 118 + RPDLPVPVLAATP +QDVPVYLDGVG++RALNTVTVRSQVDGKLIAVNF EGQD Sbjct: 56 NQ----RPDLPVPVLAATPRIQDVPVYLDGVGAIRALNTVTVRSQVDGKLIAVNFTEGQD 111 Query: 119 VKKGDVLGEIDPAIYQAQYDQAVATKAKDEALLANQKIDLARYEQLAASNAGSKQQADTQ 178 VKKGDV+GEIDPA+YQA YDQAVA KA+D+A LANQ+IDL RYEQLAASNAGSKQQADTQ Sbjct: 112 VKKGDVVGEIDPALYQATYDQAVAKKAQDQAQLANQRIDLTRYEQLAASNAGSKQQADTQ 171 Query: 179 RALVAQQQAIIKADQAQIDNMRATLGYTKIVAPISGRAGLRQVDQGNIIHASDTTGLVIL 238 RALVAQ +A++KADQA IDN ATL YTKIVAPISGRAGLRQVDQGNIIHA+DTTGLV++ Sbjct: 172 RALVAQTEALVKADQAAIDNAAATLSYTKIVAPISGRAGLRQVDQGNIIHAADTTGLVVI 231 Query: 239 TQLQPIAVWFSLPQQQIMRVNAAAAKGQLAVDVFGNDGVTVIDTGKLTGIDNQVDPTTGT 298 TQLQPIAVWFSLPQQQIMRVNAAAAKG LAVDVFGNDGVTVIDTGKLTGIDNQVD TTGT Sbjct: 232 TQLQPIAVWFSLPQQQIMRVNAAAAKGALAVDVFGNDGVTVIDTGKLTGIDNQVDQTTGT 291 Query: 299 LKLKAEFPNTSYQLWPGQFVNVRLKVETLPQAIVVPTSAVQRGPAGTFSYVIGEGDIVTA 358 L+LKAEFPN +YQLWPGQFVNVRLKVETL QA+VVPTSAVQRGP GTFSYVIGE ++V+A Sbjct: 292 LRLKAEFPNANYQLWPGQFVNVRLKVETLMQALVVPTSAVQRGPIGTFSYVIGEDNVVSA 351 Query: 359 KPVTVTQQNEHEAVIASGLTTSDRVVTTGFANLADGAKVVVGKDDGPPAADLAPRKRSRN 418 KPVTVTQQNEH+AVIASGL+ +DRVVTTGFANL+DG+KVVVG+DD P+ADLAPRKRSR Sbjct: 352 KPVTVTQQNEHDAVIASGLSANDRVVTTGFANLSDGSKVVVGRDDQTPSADLAPRKRSRG 411 Query: 419 PDGKRGAQGAGQGEGQGKDGKKDWQGKDGEHRGRHEHSEGDQKGQTGPAPAPAAGGE 475 PD ++ KDG+KD QGKDGE R + SEGDQKGQTGPAP P A G Sbjct: 412 PDAQK------------KDGQKDGQGKDGEPRAKRSSSEGDQKGQTGPAPGPGATGS 456 >ref|YP_001239908.1| multidrug resistance protein mdtA [Bradyrhizobium sp. BTAi1] gb|ABQ36002.1| Multidrug resistance protein mdtA precursor [Bradyrhizobium sp. BTAi1] Length = 473 Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/488 (74%), Positives = 396/488 (81%), Gaps = 18/488 (3%) Query: 1 MLFKPDSTDDEKRTAPRKRSLLSRLLGRMVSLLITLVILGGLGYLGWLAFQPKQNGGGGR 60 MLFKPD EK KR+ S + R+VS+ ITL+ILGGLGY+GW+A Q KQ Sbjct: 1 MLFKPD----EKGAGAVKRARAS-VARRLVSITITLLILGGLGYIGWMAMQQKQQQ---V 52 Query: 61 GAGGRPDLPVPVLAATPHVQDVPVYLDGVGSVRALNTVTVRSQVDGKLIAVNFVEGQDVK 120 RPDLPVPVLAA+P ++DVPVYLDGVG+VRALNTVTVRSQVDGKLIAVNFVEGQDVK Sbjct: 53 NRFARPDLPVPVLAASPVIKDVPVYLDGVGAVRALNTVTVRSQVDGKLIAVNFVEGQDVK 112 Query: 121 KGDVLGEIDPAIYQAQYDQAVATKAKDEALLANQKIDLARYEQLAASNAGSKQQADTQRA 180 +GDVL EIDPAIYQAQYDQAVA KA+DEA LANQK+DLARYEQLAAS+AGSKQQADTQRA Sbjct: 113 QGDVLAEIDPAIYQAQYDQAVAKKAQDEAQLANQKLDLARYEQLAASSAGSKQQADTQRA 172 Query: 181 LVAQQQAIIKADQAQIDNMRATLGYTKIVAPISGRAGLRQVDQGNIIHASDTTGLVILTQ 240 +VAQQQA+IKADQA IDN ATL YTKIVAPISGRAGLRQVDQGNII ASD TGLV++TQ Sbjct: 173 VVAQQQALIKADQAAIDNAAATLSYTKIVAPISGRAGLRQVDQGNIIRASDATGLVVITQ 232 Query: 241 LQPIAVWFSLPQQQIMRVNAAAAKGQLAVDVFGNDGVTVIDTGKLTGIDNQVDPTTGTLK 300 LQPIAV FSLPQQQIMRVNAAAAKGQLAVDVFGNDGVTVIDTG L GIDNQVD TTGTLK Sbjct: 233 LQPIAVQFSLPQQQIMRVNAAAAKGQLAVDVFGNDGVTVIDTGTLRGIDNQVDQTTGTLK 292 Query: 301 LKAEFPNTSYQLWPGQFVNVRLKVETLPQAIVVPTSAVQRGPAGTFSYVIGEGDIVTAKP 360 LKAEFPN +QLWPGQFVNVRLKVETLPQAI VPTSAVQRGPAGTFSYVIGEG++ +A P Sbjct: 293 LKAEFPNARFQLWPGQFVNVRLKVETLPQAITVPTSAVQRGPAGTFSYVIGEGEVASAHP 352 Query: 361 VTVTQQNEHEAVIASGLTTSDRVVTTGFANLADGAKVVVGKDDGPPAADLAPRKRSRNPD 420 VTV QQNE EAVIASGL+ SDRVVTTGFANLADG KVV+G+ + P ADLAPRKR R+P Sbjct: 353 VTVVQQNESEAVIASGLSPSDRVVTTGFANLADGVKVVIGRAEQTPQADLAPRKRGRSPQ 412 Query: 421 GKRGAQGAGQGEGQGKDG--KKDWQGKDGEHRGRHE-HSEGDQKGQTGPAPAPAAGGEQS 477 K Q + Q K+G D KDGEHR R + + Q G G P P AGGEQ Sbjct: 413 AK------DQTKDQTKEGGAAPDGTAKDGEHRRRPQGDGQSGQAGSAGAPPPPQAGGEQG 466 Query: 478 GGAPKAQP 485 GA + QP Sbjct: 467 RGA-RPQP 473 >ref|YP_001205889.1| multidrug ABC transporter [Bradyrhizobium sp. ORS 278] emb|CAL77664.1| Multidrug resistance protein mdtA precursor (Multidrug transporter mdtA) [Bradyrhizobium sp. ORS 278] Length = 467 Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/487 (75%), Positives = 396/487 (81%), Gaps = 22/487 (4%) Query: 1 MLFKPDSTDDEKRTAPRKRSLLSRLLGRMVSLLITLVILGGLGYLGWLAFQPKQNGGGGR 60 MLFKPD EK KR+ S + R+VS+ ITL+ILGGLGY+GW A Q KQ R Sbjct: 1 MLFKPD----EKGAGAVKRAR-SSVARRLVSITITLLILGGLGYIGWSAMQQKQQANN-R 54 Query: 61 GAGGRPDLPVPVLAATPHVQDVPVYLDGVGSVRALNTVTVRSQVDGKLIAVNFVEGQDVK 120 A RPDLPVPVLAA+P ++DVPVYLDGVGSVRALNTVTVRSQVDGKLIAVNFVEGQDVK Sbjct: 55 FA--RPDLPVPVLAASPVIKDVPVYLDGVGSVRALNTVTVRSQVDGKLIAVNFVEGQDVK 112 Query: 121 KGDVLGEIDPAIYQAQYDQAVATKAKDEALLANQKIDLARYEQLAASNAGSKQQADTQRA 180 KGDVL EIDPAIYQAQYDQAVA KA+DEA LANQK+DLARYEQLAAS+AGSKQQADTQRA Sbjct: 113 KGDVLAEIDPAIYQAQYDQAVAKKAQDEAQLANQKLDLARYEQLAASSAGSKQQADTQRA 172 Query: 181 LVAQQQAIIKADQAQIDNMRATLGYTKIVAPISGRAGLRQVDQGNIIHASDTTGLVILTQ 240 +VAQQQA+IKADQA IDN ATL YTKIVAPI+GRAGLRQVDQGNIIH++DTTGLV++TQ Sbjct: 173 VVAQQQALIKADQAAIDNAAATLSYTKIVAPIAGRAGLRQVDQGNIIHSADTTGLVVITQ 232 Query: 241 LQPIAVWFSLPQQQIMRVNAAAAKGQLAVDVFGNDGVTVIDTGKLTGIDNQVDPTTGTLK 300 LQPIAV FSLPQQQIMRVNAAAAKG LAVDVFGNDGVTVIDTG L GIDNQVD TTGTLK Sbjct: 233 LQPIAVQFSLPQQQIMRVNAAAAKGPLAVDVFGNDGVTVIDTGTLRGIDNQVDQTTGTLK 292 Query: 301 LKAEFPNTSYQLWPGQFVNVRLKVETLPQAIVVPTSAVQRGPAGTFSYVIGEGDIVTAKP 360 LKAEFPNT +QLWPGQFVNVRLKVETL QA+ VPTSAVQRGPAGTFSYVIGEGDI +A P Sbjct: 293 LKAEFPNTKFQLWPGQFVNVRLKVETLRQALTVPTSAVQRGPAGTFSYVIGEGDIASAHP 352 Query: 361 VTVTQQNEHEAVIASGLTTSDRVVTTGFANLADGAKVVVGKDDGPPAADLAPRKRSRNPD 420 VTV QQNE EAVIASGL+ SDRV+TTGFANLADGAKVVVG+ D P ADLAPRKR RNP Sbjct: 353 VTVVQQNESEAVIASGLSPSDRVITTGFANLADGAKVVVGRADQAPQADLAPRKRGRNPQ 412 Query: 421 GKRGAQGAGQGEGQGKDGKKDWQG--KDGEHRGRHEHSEGDQKGQTGPAPAPAAGGEQSG 478 GK Q + Q K+G +G KDGE R R D +G G P GEQ Sbjct: 413 GK------DQTKDQAKEGGAPAEGAPKDGERRRR---PAADGQGDAG--NPPQGSGEQGR 461 Query: 479 GAPKAQP 485 GA + QP Sbjct: 462 GA-RPQP 467 >ref|YP_569700.1| secretion protein HlyD [Rhodopseudomonas palustris BisB5] gb|ABE39799.1| secretion protein HlyD [Rhodopseudomonas palustris BisB5] Length = 462 Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust. Identities = 327/450 (72%), Positives = 366/450 (81%), Gaps = 6/450 (1%) Query: 1 MLFKPDSTDDEKRTAPRKRSLLSRLLGRMVSLLITLVILGGLGYLGWLAFQPKQNGGGGR 60 MLFKP+S D A K +L SR R VSLL+T +IL GLGY+ W AFQ KQ G Sbjct: 1 MLFKPESNDAAGIEAGTK-NLASRARRRTVSLLVTAIILAGLGYIAWNAFQTKQTPTGRN 59 Query: 61 GAGGRPDLPVPVLAATPHVQDVPVYLDGVGSVRALNTVTVRSQVDGKLIAVNFVEGQDVK 120 GA RPD+ VPVLAATP VQDVPVYLDGVGSVRALNTVTVR+QVDGKL++V F EGQDVK Sbjct: 60 GA--RPDMAVPVLAATPKVQDVPVYLDGVGSVRALNTVTVRAQVDGKLLSVKFTEGQDVK 117 Query: 121 KGDVLGEIDPAIYQAQYDQAVATKAKDEALLANQKIDLARYEQLAASNAGSKQQADTQRA 180 GDVL EIDPAIYQAQYDQAVA KA+DEA LAN KIDLARY+QLAASNAGSKQQADTQ+A Sbjct: 118 AGDVLAEIDPAIYQAQYDQAVAKKAQDEAQLANAKIDLARYQQLAASNAGSKQQADTQKA 177 Query: 181 LVAQQQAIIKADQAQIDNMRATLGYTKIVAPISGRAGLRQVDQGNIIHASDTTGLVILTQ 240 VAQ +A +++DQA IDN ATL YTK+VAP+SGRAGLRQVDQGN++ ++DTTGLV++TQ Sbjct: 178 TVAQLEAQVRSDQAAIDNAAATLSYTKVVAPLSGRAGLRQVDQGNLVRSADTTGLVVITQ 237 Query: 241 LQPIAVWFSLPQQQIMRVNAAAAKGQLAVDVFGNDGVTVIDTGKLTGIDNQVDPTTGTLK 300 LQPIAV FSLPQQQI+RVNAA+AKG L VDVFGNDGVTV+DTG L GIDNQVD TTGT+K Sbjct: 238 LQPIAVQFSLPQQQIVRVNAASAKGALPVDVFGNDGVTVVDTGILRGIDNQVDQTTGTVK 297 Query: 301 LKAEFPNTSYQLWPGQFVNVRLKVETLPQAIVVPTSAVQRGPAGTFSYVIGEGDIVTAKP 360 LKAEFPN +QLWPGQFVNVRLKVETL A+VVPTSAVQRGPAGTFSYVI + ++V A+P Sbjct: 298 LKAEFPNARFQLWPGQFVNVRLKVETLSAAVVVPTSAVQRGPAGTFSYVIDQDNVVHARP 357 Query: 361 VTVTQQNEHEAVIASGLTTSDRVVTTGFANLADGAKVVVGKDDGPPAADLAPRKRSRNPD 420 V VTQQNE EAVIASGLT +DRVVTTGFANLA+GAKV VG P ADLAPRKR P Sbjct: 358 VKVTQQNETEAVIASGLTAADRVVTTGFANLAEGAKVAVGDSSQTPTADLAPRKRRSGPP 417 Query: 421 GK-RGAQG-AGQGEGQGKDGKKDWQGKDGE 448 G + QG AG GE QGK + QG G+ Sbjct: 418 GDPQSKQGEAGTGE-QGKRRRGAEQGPTGQ 446 >ref|YP_577322.1| secretion protein HlyD [Nitrobacter hamburgensis X14] gb|ABE62862.1| secretion protein HlyD [Nitrobacter hamburgensis X14] Length = 454 Score = 612 bits (1577), Expect = e-173, Method: Compositional matrix adjust. Identities = 325/467 (69%), Positives = 368/467 (78%), Gaps = 18/467 (3%) Query: 1 MLFKPDSTDDEKRTAPRKRSLLSRLLGR----MVSLLITLVILGGLGYLGWLAFQPKQNG 56 MLFKP D+ + A + ++ GR V + ITL+I+GGL YLGW A K+ Sbjct: 1 MLFKP-GLDETAKAA--GDGMPDKVTGRGRRPAVRIAITLLIVGGLAYLGWTALAQKKRD 57 Query: 57 GGGRGAGGRPDLPVPVLAATPHVQDVPVYLDGVGSVRALNTVTVRSQVDGKLIAVNFVEG 116 GGRPDL VPVLAATP +QDVPVYLDGVG+VRALNTV VRSQVDGKLIAVNF EG Sbjct: 58 A----RGGRPDLAVPVLAATPRIQDVPVYLDGVGAVRALNTVVVRSQVDGKLIAVNFTEG 113 Query: 117 QDVKKGDVLGEIDPAIYQAQYDQAVATKAKDEALLANQKIDLARYEQLAASNAGSKQQAD 176 QDVKK DVLGEIDP IYQAQYDQAVA KA+DEA LAN ++DL RY+QLAASNAGSKQQAD Sbjct: 114 QDVKKDDVLGEIDPVIYQAQYDQAVAKKAQDEAQLANMRLDLKRYQQLAASNAGSKQQAD 173 Query: 177 TQRALVAQQQAIIKADQAQIDNMRATLGYTKIVAPISGRAGLRQVDQGNIIHASDTTGLV 236 TQ A+VAQQ+A+++ADQA IDN +A LGYT+IVAPISGRAGLRQVD+GNIIHASD TGLV Sbjct: 174 TQSAVVAQQEALVRADQAAIDNAQAMLGYTRIVAPISGRAGLRQVDRGNIIHASDATGLV 233 Query: 237 ILTQLQPIAVWFSLPQQQIMRVNAAAAKGQLAVDVFGNDGVTVIDTGKLTGIDNQVDPTT 296 I+TQLQPIAV FSLPQQQI RVNAA AKG LAVDVFGNDG TV+DTGKL G+DNQVDPTT Sbjct: 234 IITQLQPIAVQFSLPQQQITRVNAAMAKGALAVDVFGNDGTTVVDTGKLIGVDNQVDPTT 293 Query: 297 GTLKLKAEFPNTSYQLWPGQFVNVRLKVETLPQAIVVPTSAVQRGPAGTFSYVIGEGDIV 356 GTLKLKAEFPN +QLWPGQFVNVRLKVETL QA V+PTSAVQRGP GTFSYVIG DI Sbjct: 294 GTLKLKAEFPNGHFQLWPGQFVNVRLKVETLSQATVIPTSAVQRGPLGTFSYVIGSDDIA 353 Query: 357 TAKPVTVTQQNEHEAVIASGLTTSDRVVTTGFANLADGAKVVVGKDDGPPAADLAPRKRS 416 TAKPVTVTQQ+E +AVIA G+ +DRVVTTGFANL+DGAKV V ++D P ADLAP+KR Sbjct: 354 TAKPVTVTQQDEKDAVIAKGIAPTDRVVTTGFANLSDGAKVTVSQNDQTPTADLAPQKRQ 413 Query: 417 RNPDGKRGAQGAGQGEGQGKDGKKDWQGKDGEHRGRHEHSEGDQKGQ 463 GKRGA+ G+ G+ +G + G + G S G+ K Q Sbjct: 414 ----GKRGARQGGERRGKRDEGSQKQSGSGVQKNG---QSSGNAKTQ 453