BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0119.0008.p (214 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02378719.1| transcriptional regulator, TetR family protei... 284 6e-75 ref|ZP_04944093.1| Transcriptional regulator [Burkholderia cenoc... 274 6e-72 ref|YP_569475.1| regulatory protein TetR [Rhodopseudomonas palus... 274 6e-72 ref|YP_621429.1| TetR family transcriptional regulator [Burkhold... 271 4e-71 ref|YP_001774378.1| TetR family transcriptional regulator [Burkh... 269 2e-70 >ref|ZP_02378719.1| transcriptional regulator, TetR family protein [Burkholderia ubonensis Bu] Length = 223 Score = 284 bits (727), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 139/200 (69%), Positives = 160/200 (80%) Query: 14 PGLARLAPTQQRSRERFERILACAAEIMAEKGSEAFRMSDIVARSGVAFGSLYQYFPDKA 73 PG ARL P QQRSRERFERILACAAE+MAEKG +AFRMSDIV R+G+AFGSLYQYFPDK Sbjct: 22 PGRARLVPAQQRSRERFERILACAAEVMAEKGCDAFRMSDIVERTGIAFGSLYQYFPDKT 81 Query: 74 AIIGTLAERHNAVGRDCVRRDLAAVATARDLHPALCRIVDSYYEMFMREPVMRDIWQATQ 133 A+IGTLAER+NA+G +CVRRDL+ + DLH LCRI DSYY MF+ EP+MRDIW+ATQ Sbjct: 82 AVIGTLAERYNALGHECVRRDLSRMKRVEDLHGTLCRITDSYYRMFVAEPLMRDIWRATQ 141 Query: 134 ADRALQKLDADDMAVLSGLLSDAIRRIAPDMPTAALATFSALTMTLIAAAVRHAIALPPR 193 ADRALQ LD D A L+GLL++ +R IAPD A L+ FS LTM LIAAAVR+AI LPP+ Sbjct: 142 ADRALQALDEADGAFLAGLLTERLREIAPDARDAQLSAFSELTMVLIAAAVRYAIGLPPK 201 Query: 194 KARQALTQFKTMLPHDLAGL 213 ARQ L FK LP +LA L Sbjct: 202 AARQRLAMFKRTLPVNLAVL 221 >ref|ZP_04944093.1| Transcriptional regulator [Burkholderia cenocepacia PC184] gb|EAY67264.1| Transcriptional regulator [Burkholderia cenocepacia PC184] Length = 221 Score = 274 bits (701), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 134/195 (68%), Positives = 154/195 (78%) Query: 19 LAPTQQRSRERFERILACAAEIMAEKGSEAFRMSDIVARSGVAFGSLYQYFPDKAAIIGT 78 L PTQQRSRERFERILACA+++M EKG +AFRMSDIV R+G++FGSLYQYFPDKAA+IGT Sbjct: 25 LVPTQQRSRERFERILACASDVMIEKGCDAFRMSDIVERTGISFGSLYQYFPDKAAVIGT 84 Query: 79 LAERHNAVGRDCVRRDLAAVATARDLHPALCRIVDSYYEMFMREPVMRDIWQATQADRAL 138 LAER+NAVG DCVRRDLA + T DLH L RI DSYY MF+ EP+MRDIW+ATQADRAL Sbjct: 85 LAERYNAVGHDCVRRDLAGMKTIDDLHATLARITDSYYRMFVDEPLMRDIWRATQADRAL 144 Query: 139 QKLDADDMAVLSGLLSDAIRRIAPDMPTAALATFSALTMTLIAAAVRHAIALPPRKARQA 198 Q LD D L+GL +DA+ +APD A + F+ L M IAAAVRHAI LPP+ ARQ Sbjct: 145 QALDRADGEFLAGLFADALAEVAPDTTRAQRSAFAELMMIQIAAAVRHAITLPPKAARQL 204 Query: 199 LTQFKTMLPHDLAGL 213 LT FK MLP DLA L Sbjct: 205 LTMFKRMLPRDLAVL 219 >ref|YP_569475.1| regulatory protein TetR [Rhodopseudomonas palustris BisB5] gb|ABE39574.1| transcriptional regulator, TetR family [Rhodopseudomonas palustris BisB5] Length = 216 Score = 274 bits (701), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 136/205 (66%), Positives = 158/205 (77%) Query: 9 AEVPLPGLARLAPTQQRSRERFERILACAAEIMAEKGSEAFRMSDIVARSGVAFGSLYQY 68 A P G+ARL P+Q RSRERFERIL CAAE+MAEKGSE FRMSDIVAR+G+AFGSLYQY Sbjct: 12 AAAPGSGVARLVPSQARSRERFERILTCAAEVMAEKGSEDFRMSDIVARTGIAFGSLYQY 71 Query: 69 FPDKAAIIGTLAERHNAVGRDCVRRDLAAVATARDLHPALCRIVDSYYEMFMREPVMRDI 128 FPDK AII TLAER NA G DC+RR+LAA+ DLH L I D YY+ F EPV+R + Sbjct: 72 FPDKTAIIATLAERLNAEGHDCIRRELAALKRTEDLHDVLGAITDGYYQFFHDEPVVRCV 131 Query: 129 WQATQADRALQKLDADDMAVLSGLLSDAIRRIAPDMPTAALATFSALTMTLIAAAVRHAI 188 WQATQADRALQ+LDADD A L+GLL++A+RR+AP P AAL F+ L + LIAA VRHAI Sbjct: 132 WQATQADRALQQLDADDGAFLAGLLAEALRRVAPRAPEAALRDFAQLMIVLIAATVRHAI 191 Query: 189 ALPPRKARQALTQFKTMLPHDLAGL 213 LPPR+A++ L FK LP D A L Sbjct: 192 TLPPREAKRVLALFKRTLPKDFAAL 216 >ref|YP_621429.1| TetR family transcriptional regulator [Burkholderia cenocepacia AU 1054] ref|YP_839903.1| TetR family transcriptional regulator [Burkholderia cenocepacia HI2424] gb|ABF76456.1| transcriptional regulator, TetR family [Burkholderia cenocepacia AU 1054] gb|ABK13010.1| transcriptional regulator, TetR family [Burkholderia cenocepacia HI2424] Length = 221 Score = 271 bits (693), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 132/195 (67%), Positives = 154/195 (78%) Query: 19 LAPTQQRSRERFERILACAAEIMAEKGSEAFRMSDIVARSGVAFGSLYQYFPDKAAIIGT 78 L PTQQRSRERFERILACA+++M EKG +AFRMSDIV R+G++FGSLYQYFPDKAA+IGT Sbjct: 25 LVPTQQRSRERFERILACASDVMIEKGCDAFRMSDIVERTGISFGSLYQYFPDKAAVIGT 84 Query: 79 LAERHNAVGRDCVRRDLAAVATARDLHPALCRIVDSYYEMFMREPVMRDIWQATQADRAL 138 LAER+NAVG DCVRRDLA + T DLH L RI DSYY MF+ EP++RDIW+ATQADRAL Sbjct: 85 LAERYNAVGHDCVRRDLAGMKTIDDLHATLARITDSYYRMFVDEPLVRDIWRATQADRAL 144 Query: 139 QKLDADDMAVLSGLLSDAIRRIAPDMPTAALATFSALTMTLIAAAVRHAIALPPRKARQA 198 Q LD D L+GL +DA+ +APD A + F+ L M IAAAVRHAI LPP+ ARQ Sbjct: 145 QALDRADGEFLAGLFADALAEVAPDTTRAQRSAFAELMMIQIAAAVRHAITLPPKAARQL 204 Query: 199 LTQFKTMLPHDLAGL 213 LT FK MLP DL+ L Sbjct: 205 LTMFKRMLPRDLSVL 219 >ref|YP_001774378.1| TetR family transcriptional regulator [Burkholderia cenocepacia MC0-3] gb|ACA95883.1| transcriptional regulator, TetR family [Burkholderia cenocepacia MC0-3] Length = 220 Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 131/195 (67%), Positives = 153/195 (78%) Query: 19 LAPTQQRSRERFERILACAAEIMAEKGSEAFRMSDIVARSGVAFGSLYQYFPDKAAIIGT 78 L PTQQRSRERFERILACA+++M EKG +A RMSDIV R+G++FGSLYQYFPDKAA+IGT Sbjct: 24 LVPTQQRSRERFERILACASDVMIEKGCDALRMSDIVERTGISFGSLYQYFPDKAAVIGT 83 Query: 79 LAERHNAVGRDCVRRDLAAVATARDLHPALCRIVDSYYEMFMREPVMRDIWQATQADRAL 138 LAER+NAVG DCVRRDLA + T DLH L RI DSYY MF+ EP+MRDIW+ATQADRAL Sbjct: 84 LAERYNAVGHDCVRRDLAGMKTIDDLHATLARITDSYYRMFVDEPLMRDIWRATQADRAL 143 Query: 139 QKLDADDMAVLSGLLSDAIRRIAPDMPTAALATFSALTMTLIAAAVRHAIALPPRKARQA 198 Q LD D L+GL ++A+ +APD A + F+ L M IAAAVRHAI LPP+ ARQ Sbjct: 144 QALDRADGEFLAGLFANALAEVAPDTTRAQRSAFAELMMIQIAAAVRHAITLPPKAARQL 203 Query: 199 LTQFKTMLPHDLAGL 213 LT FK MLP DL+ L Sbjct: 204 LTMFKRMLPRDLSIL 218