BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0118.0035.p (282 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_759628.1| short chain dehydrogenase/reductase family oxid... 383 e-104 ref|YP_001413979.1| short-chain dehydrogenase/reductase SDR [Par... 212 6e-53 ref|ZP_01617820.1| hypothetical protein GP2143_09415 [marine gam... 210 2e-52 ref|ZP_08629833.1| short-chain dehydrogenase/reductase [Bradyrhi... 191 1e-46 ref|ZP_01627272.1| short-chain dehydrogenase/reductase SDR [mari... 188 7e-46 >ref|YP_759628.1| short chain dehydrogenase/reductase family oxidoreductase [Hyphomonas neptunium ATCC 15444] gb|ABI75402.1| oxidoreductase, short chain dehydrogenase/reductase family [Hyphomonas neptunium ATCC 15444] Length = 282 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 193/281 (68%), Positives = 230/281 (81%) Query: 1 VKELAGKTAFVTGAASGIGLGIATALAQAGAKVMLCDIEEAALSAALEQLRRTNVDVDGV 60 +K L GKTAFVTGAASGIGLGIATALAQAG KVMLCDIE+AAL A+ LR TN DVDGV Sbjct: 1 MKHLEGKTAFVTGAASGIGLGIATALAQAGVKVMLCDIEKAALDKAVATLRETNADVDGV 60 Query: 61 KADISIKSELVAAAEATTARYGKVHILVNNAGVGGGGPYGTWTDASWDWTLGVNLMATIW 120 AD+S+K L AA+ T AR+GKVHILVNNAGVGGGG YGTW DA W+W +GVNLM+ +W Sbjct: 61 VADVSLKDNLQRAADETIARFGKVHILVNNAGVGGGGDYGTWNDAGWNWVVGVNLMSVVW 120 Query: 121 GIEIFGPLIEQHGEGGHIVSTASIAGLISGASNAYNVSKYGVVSLSEGLRLELAPRGIGV 180 GIEIFGPLIE HGEGG IVSTASIAG+++ + AY+V+K+GVV+LSE LR +LA RGIGV Sbjct: 121 GIEIFGPLIEAHGEGGQIVSTASIAGMVALTNPAYDVTKFGVVALSEDLRPKLAARGIGV 180 Query: 181 SVLCPGFIRTQIANSRRNLPKRFEGAVRALPTSGPIAEQINLIRERVSQGIDPNYVGELV 240 SVLCPG IRT I +S RN+P RF G ++ +PT GP E + + E ++ GIDP YVGELV Sbjct: 181 SVLCPGVIRTNIVDSGRNIPSRFAGQIQTVPTEGPGTEILKAVTEAIASGIDPLYVGELV 240 Query: 241 REGVENDWPYIFTDLEFEPIVDARFAAIKQGFDRIRGRSPK 281 RE +ENDWP+IFTD++FEP ++ARFAAIK+GFDRIR R P+ Sbjct: 241 REAIENDWPHIFTDMQFEPHIEARFAAIKEGFDRIRDRVPR 281 >ref|YP_001413979.1| short-chain dehydrogenase/reductase SDR [Parvibaculum lavamentivorans DS-1] gb|ABS64322.1| short-chain dehydrogenase/reductase SDR [Parvibaculum lavamentivorans DS-1] Length = 294 Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 127/275 (46%), Positives = 163/275 (59%), Gaps = 5/275 (1%) Query: 1 VKELAGKTAFVTGAASGIGLGIATALAQAGAKVMLCDIEEAALSAALEQLRRTNVDVDGV 60 +++L GKTAFVTG ASGIGL +A A AG VML DI E L A+ +L + GV Sbjct: 2 MRDLQGKTAFVTGGASGIGLSMARAFGAAGMNVMLADINEDDLGVAVAELNERQIKAAGV 61 Query: 61 KADISIKSELVAAAEATTARYGKVHILVNNAGVGGGGPYGTWTDASWDWTLGVNLMATIW 120 + D++ + L AAE T A YGKVH++ NNAGVG GG GT WDWT+ VNLM ++ Sbjct: 62 RCDVADRKSLEQAAEETVATYGKVHVVCNNAGVGAGGAIGTVKPGDWDWTIAVNLMGVVY 121 Query: 121 GIEIFGPLIEQHGEGGHIVSTASIAGLIS-GASNAYNVSKYGVVSLSEGLRLELAPRGIG 179 G E F P I HGEGGH V+TAS+AG+IS Y SKY VV +SEG +LAP IG Sbjct: 122 GTEAFLPHIRAHGEGGHFVNTASMAGMISVPGMEPYTASKYAVVGMSEGWAGQLAPENIG 181 Query: 180 VSVLCPGFIRTQIANSRRNLPKRFEGAVRALPTSGPIAEQINLIRERVSQGIDPNYVGEL 239 VSVLCPGF+RT+I S R ++F A T +I ++ V G+DP+ VG Sbjct: 182 VSVLCPGFVRTRIHESGRARQEKFGPAA----TDERDPARIEAAKQLVLGGLDPDRVGAR 237 Query: 240 VREGVENDWPYIFTDLEFEPIVDARFAAIKQGFDR 274 V E ++ + YIFT + P+ + R I F R Sbjct: 238 VLEAIQANELYIFTHPDMAPLFEERARNIMAAFLR 272 >ref|ZP_01617820.1| hypothetical protein GP2143_09415 [marine gamma proteobacterium HTCC2143] gb|EAW30413.1| hypothetical protein GP2143_09415 [marine gamma proteobacterium HTCC2143] Length = 297 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 124/275 (45%), Positives = 169/275 (61%), Gaps = 5/275 (1%) Query: 1 VKELAGKTAFVTGAASGIGLGIATALAQAGAKVMLCDIEEAALSAALEQLRRTNVDVDGV 60 +K+ GK AFVTGAASGIGLGI A G KVM+ DIE L +A+ LR DV GV Sbjct: 1 MKDFDGKIAFVTGAASGIGLGITRAFVAKGMKVMMADIEAGPLESAVASLREQGADVAGV 60 Query: 61 KADISIKSELVAAAEATTARYGKVHILVNNAGVGGGGPYGTWTD-ASWDWTLGVNLMATI 119 D+S + AAE T +GKVH++VNNAGVGGGG W WT+ VNLM + Sbjct: 61 ICDVSDVEAVKLAAEKTIETFGKVHVIVNNAGVGGGGGETGTIPIEDWKWTVDVNLMGVV 120 Query: 120 WGIEIFGPLIEQHGEGGHIVSTASIAGLI-SGASNAYNVSKYGVVSLSEGLRLELAPRGI 178 +G EIF PLI++HGEGG+I++TAS+AG + + YN +K+ VV SE + EL P+GI Sbjct: 121 YGCEIFVPLIKEHGEGGYIINTASLAGQVGTVGMGPYNATKFAVVGYSESMNSELVPQGI 180 Query: 179 GVSVLCPGFIRTQIANSRRNLPKRFEGAVRALPTSGPIAEQINLIRERVSQGIDPNYVGE 238 GV+VLCP ++ TQIA SRRN P G ++ + E N + E +S G+ + VG+ Sbjct: 181 GVAVLCPAWVNTQIAESRRNHPA---GTDQSEVQNSADEELKNTVNEAISNGMSADTVGK 237 Query: 239 LVREGVENDWPYIFTDLEFEPIVDARFAAIKQGFD 273 V E +E D YIFT ++ +++A+ + + Q D Sbjct: 238 WVVESMEQDALYIFTHPNWKVVIEAKTSRLLQAHD 272 >ref|ZP_08629833.1| short-chain dehydrogenase/reductase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07476.1| short-chain dehydrogenase/reductase [Bradyrhizobiaceae bacterium SG-6C] Length = 249 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 108/244 (44%), Positives = 141/244 (57%), Gaps = 2/244 (0%) Query: 32 KVMLCDIEEAALSAALEQLRRTNVDVDGVKADISIKSELVAAAEATTARYGKVHILVNNA 91 KVML D+E AL+AA+ L V G+ D++ + + AA+AT +G VHI+ NNA Sbjct: 2 KVMLADVEADALAAAVNSLHNVGPGVRGIDCDVADAAGVERAAKATFDAFGNVHIVCNNA 61 Query: 92 GVGGGGPYGTWTDASWDWTLGVNLMATIWGIEIFGPLIEQHGEGGHIVSTASIAGLISGA 151 GV GG SW W + VNLM + GI F P + HGEGGHIV+TAS+AG+ SG Sbjct: 62 GVAAGGGIDEIALDSWRWVIDVNLMGVVHGIRAFLPHMRAHGEGGHIVNTASMAGMQSGL 121 Query: 152 S-NAYNVSKYGVVSLSEGLRLELAPRGIGVSVLCPGFIRTQIANSRRNLPKRFEGAVRAL 210 + Y SK+ VV +SEGL +LAP GIGVSVLCPGF+RT+I S RN P ++ A Sbjct: 122 GFSPYTASKFAVVGMSEGLAPQLAPFGIGVSVLCPGFVRTRIGESGRNRPDQYGAAQVPE 181 Query: 211 PTSGPIAEQINLIRERVSQGIDPNYVGELVREGVENDWPYIFTDLEFEPIVDARFAAIKQ 270 P S A + ++ E + GIDP V V + + Y+FT E V+ RF AI Sbjct: 182 PGSA-TAMLVAMVDEMIGNGIDPADVAARVLAAIRANELYVFTHPEMRTEVENRFTAITT 240 Query: 271 GFDR 274 FDR Sbjct: 241 AFDR 244 >ref|ZP_01627272.1| short-chain dehydrogenase/reductase SDR [marine gamma proteobacterium HTCC2080] gb|EAW39988.1| short-chain dehydrogenase/reductase SDR [marine gamma proteobacterium HTCC2080] Length = 297 Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 112/281 (39%), Positives = 162/281 (57%), Gaps = 8/281 (2%) Query: 3 ELAGKTAFVTGAASGIGLGIATALAQAGAKVMLCDIEEAALSAALEQLRRTNVDVDGVKA 62 + GKTA ++G A GIGL IA AL + V+L DI++ L A +L+ V V V Sbjct: 9 QFQGKTAIISGGAEGIGLSIAKALGEQQMNVVLADIDKDNLERARLELQSLGVPVLAVSL 68 Query: 63 DISIKSELVAAAEATTARYGKVHILVNNAGVGG-GGPYGTWTDASWDWTLGVNLMATIWG 121 D++ + + AAEA R+GK+H++VNNAGVGG GP + W W L VNLM ++G Sbjct: 69 DVADEGQWQLAAEAAVERFGKIHMVVNNAGVGGDSGPIESQEKEGWQWALDVNLMGVVYG 128 Query: 122 IEIFGPLIEQHGEGGHIVSTASIAGLISGA--SNAYNVSKYGVVSLSEGLRLELAPRGIG 179 ++ PLI++HGEGG I++ AS+AG+ G S AYN +K VV+LSE EL + + Sbjct: 129 AKVVVPLIKEHGEGGWIINVASMAGM-GGVPYSGAYNATKAAVVALSEAWSEELKSKSVH 187 Query: 180 VSVLCPGFIRTQIANSRRNLPKRFEGAVRALPTSGPIAEQINLIRERVSQGIDPNYVGEL 239 V+VLCP F++T+I +S RN P +++ + +++ RE V GID VG+ Sbjct: 188 VAVLCPAFVQTRIYDSERNRPAQYKSKTLSPGDESSFSKR---AREMVQNGIDVALVGKR 244 Query: 240 VREGVENDWPYIFTDLEFEPIVDARFAAIKQGFDRIRGRSP 280 V E + + YIFT + +V R A I Q F G+SP Sbjct: 245 VVEALNDGELYIFTHPNYRQVVQYRSARIDQAFVNA-GKSP 284