BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0118.0031.p (297 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770915.1| transport protein [Bradyrhizobium japonicum USD... 442 e-122 ref|YP_001205484.1| DMT family permease [Bradyrhizobium sp. ORS ... 417 e-115 ref|YP_001240197.1| putative transport protein [Bradyrhizobium s... 360 1e-97 ref|ZP_08630087.1| DMT superfamily permease [Bradyrhizobiaceae b... 343 2e-92 ref|NP_948317.1| DMT family permease [Rhodopseudomonas palustris... 340 1e-91 >ref|NP_770915.1| transport protein [Bradyrhizobium japonicum USDA 110] dbj|BAC49540.1| hypothetical transport protein [Bradyrhizobium japonicum USDA 110] Length = 298 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 233/293 (79%), Positives = 264/293 (90%) Query: 5 KPSARPRLAPAGLMFLAITSVGWGFNWPSTKFLLSELPPLTLRGTTGVIGAVLLAVLAVI 64 +P RPR+APAGLMFLAITS+GWGFNWP TKFLL+ELPPLTLRG TGV+GA LLA LA++ Sbjct: 6 RPVLRPRIAPAGLMFLAITSIGWGFNWPVTKFLLAELPPLTLRGVTGVLGAGLLAALALV 65 Query: 65 RAQSLHVEKRLWPRLVLYAALNVTGWMVLMGLALLWLPASEAALIAYTMPVWASLLAWPV 124 R SL V + +WPRL+ A LNVTGWMVLMGLALLWLPASEAALIAYTMPVWAS++AWPV Sbjct: 66 RGDSLKVAREIWPRLLTAAVLNVTGWMVLMGLALLWLPASEAALIAYTMPVWASIIAWPV 125 Query: 125 LGERPTLLRTIALVMAFAGLAAIMGGSGISASKEKLPGIIMALGGAFGFALGTVLAKKYP 184 LGERPT+LRT+ LVMAF GLA+IMGG+GI+AS EKLPGIIMAL GA GFALGTV +KKYP Sbjct: 126 LGERPTVLRTLGLVMAFVGLASIMGGNGIAASTEKLPGIIMALFGALGFALGTVFSKKYP 185 Query: 185 LVMPPIPAAAWQIGLGCVPIAIVGLLIETTHLDRITTVGWWLLVYSTLIQFCVAYVAWFA 244 + +PPI AAAWQIG+GC+PI+IVGLLIET+HL+ +T VGWWLLVYST++QFC+AYV+WFA Sbjct: 186 IRLPPITAAAWQIGIGCLPISIVGLLIETSHLELVTPVGWWLLVYSTVVQFCIAYVSWFA 245 Query: 245 ALARLPASVAAIGTMAVPVIGVVASAIALHEPLGPSQIVALLFTLAGVALATR 297 ALARLPASVAAIGTMAVPVIGVVASAIALHEPLGP QI AL+FTL V LATR Sbjct: 246 ALARLPASVAAIGTMAVPVIGVVASAIALHEPLGPGQIAALVFTLGAVVLATR 298 >ref|YP_001205484.1| DMT family permease [Bradyrhizobium sp. ORS 278] emb|CAL77258.1| putative transport protein; putative permease of the drug/metabolite transporter (DMT) superfamily [Bradyrhizobium sp. ORS 278] Length = 322 Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust. Identities = 221/294 (75%), Positives = 253/294 (86%) Query: 4 QKPSARPRLAPAGLMFLAITSVGWGFNWPSTKFLLSELPPLTLRGTTGVIGAVLLAVLAV 63 KP+A R+ PAGLMFLAITS+GWGFNWP TK L+ LPPLTLRGTTGV+GA LLA+LAV Sbjct: 28 DKPAASGRITPAGLMFLAITSLGWGFNWPVTKHLVGVLPPLTLRGTTGVVGAALLALLAV 87 Query: 64 IRAQSLHVEKRLWPRLVLYAALNVTGWMVLMGLALLWLPASEAALIAYTMPVWASLLAWP 123 IR+QSL V + +WPRL+L LNVT WMVLMGLALLWLPASEAALIAYTMPVWASLLAWP Sbjct: 88 IRSQSLAVPREVWPRLILAGMLNVTAWMVLMGLALLWLPASEAALIAYTMPVWASLLAWP 147 Query: 124 VLGERPTLLRTIALVMAFAGLAAIMGGSGISASKEKLPGIIMALGGAFGFALGTVLAKKY 183 +LGERPT LR +ALV+AFAGLA+IMG +G++AS++KLPGI+M LGGAFGFALGTV+AKK Sbjct: 148 ILGERPTALRVLALVLAFAGLASIMGSNGLNASRDKLPGILMVLGGAFGFALGTVMAKKL 207 Query: 184 PLVMPPIPAAAWQIGLGCVPIAIVGLLIETTHLDRITTVGWWLLVYSTLIQFCVAYVAWF 243 P+ +PP+ AAAWQIG+GCVPI +VGL +E + R+ + W L+ YST+IQFCVAYVAWF Sbjct: 208 PIKLPPLSAAAWQIGIGCVPIVLVGLALEQSDWTRLDQLDWALMFYSTVIQFCVAYVAWF 267 Query: 244 AALARLPASVAAIGTMAVPVIGVVASAIALHEPLGPSQIVALLFTLAGVALATR 297 AALARLPASVAAIGTMAVPVIGVVASAIAL EPLG QI AL FTL VALATR Sbjct: 268 AALARLPASVAAIGTMAVPVIGVVASAIALREPLGAGQIAALAFTLGAVALATR 321 >ref|YP_001240197.1| putative transport protein [Bradyrhizobium sp. BTAi1] gb|ABQ36291.1| putative transport protein [Bradyrhizobium sp. BTAi1] Length = 297 Score = 360 bits (924), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 197/273 (72%), Positives = 235/273 (86%) Query: 4 QKPSARPRLAPAGLMFLAITSVGWGFNWPSTKFLLSELPPLTLRGTTGVIGAVLLAVLAV 63 P A R+ PAGLMFLA+TS+GWGFNWP TK L+ LPPLTLRG+TGV+GA LLA+LA+ Sbjct: 3 DTPKASGRITPAGLMFLAVTSLGWGFNWPVTKHLVGVLPPLTLRGSTGVVGAALLALLAI 62 Query: 64 IRAQSLHVEKRLWPRLVLYAALNVTGWMVLMGLALLWLPASEAALIAYTMPVWASLLAWP 123 +R+QSL V + +WPRL++ LNVT WMVLMGLALLWLPA EAALIAYTMPVWAS+LAWP Sbjct: 63 LRSQSLAVPREVWPRLIIAGLLNVTVWMVLMGLALLWLPAGEAALIAYTMPVWASILAWP 122 Query: 124 VLGERPTLLRTIALVMAFAGLAAIMGGSGISASKEKLPGIIMALGGAFGFALGTVLAKKY 183 +LGERPT LR +AL++AFAGLAA+MGG+G++AS++KLPGI+M LGGAFGFALG VLAKK Sbjct: 123 ILGERPTWLRVLALLLAFAGLAALMGGNGLAASRDKLPGILMVLGGAFGFALGAVLAKKL 182 Query: 184 PLVMPPIPAAAWQIGLGCVPIAIVGLLIETTHLDRITTVGWWLLVYSTLIQFCVAYVAWF 243 P+ +PP+ AAAWQIG+GCVPI +VG++IE + R+ + W L+ YST+IQFCVAYV WF Sbjct: 183 PIRLPPLSAAAWQIGIGCVPIVLVGVVIEQSDWSRLDQLDWALMFYSTVIQFCVAYVTWF 242 Query: 244 AALARLPASVAAIGTMAVPVIGVVASAIALHEP 276 AALARLPASVAAIGTMAVPVIGVVASAIAL EP Sbjct: 243 AALARLPASVAAIGTMAVPVIGVVASAIALREP 275 >ref|ZP_08630087.1| DMT superfamily permease [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07181.1| DMT superfamily permease [Bradyrhizobiaceae bacterium SG-6C] Length = 316 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 181/294 (61%), Positives = 232/294 (78%) Query: 4 QKPSARPRLAPAGLMFLAITSVGWGFNWPSTKFLLSELPPLTLRGTTGVIGAVLLAVLAV 63 +A+ R G + L TSVGWG NWP TK LL+ELPPL++RG +G++GA LLA+LA+ Sbjct: 22 HSAAAQRRTRTIGYLLLTATSVGWGLNWPVTKHLLTELPPLSVRGISGIVGAALLALLAL 81 Query: 64 IRAQSLHVEKRLWPRLVLYAALNVTGWMVLMGLALLWLPASEAALIAYTMPVWASLLAWP 123 + QSL V + WPRLVL + LNVT WM LMGLAL++LPASEAA++AY+MPVWAS+LAWP Sbjct: 82 LFRQSLKVPRAQWPRLVLLSGLNVTAWMALMGLALVYLPASEAAVMAYSMPVWASVLAWP 141 Query: 124 VLGERPTLLRTIALVMAFAGLAAIMGGSGISASKEKLPGIIMALGGAFGFALGTVLAKKY 183 +LGER + LR +A+ MA AGL A+MGG GI+AS KLPGI++AL GAF FA+GTV K++ Sbjct: 142 ILGERISALRVVAMAMAIAGLVALMGGGGIAASYAKLPGILLALAGAFLFAVGTVFGKRW 201 Query: 184 PLVMPPIPAAAWQIGLGCVPIAIVGLLIETTHLDRITTVGWWLLVYSTLIQFCVAYVAWF 243 PL +PP+ +A WQI +GC+P+A +GLLIE H + ++++GW L YS +IQFCVAY WF Sbjct: 202 PLTLPPLTSAVWQILIGCLPVAALGLLIEQPHFEALSSLGWTLFAYSIVIQFCVAYACWF 261 Query: 244 AALARLPASVAAIGTMAVPVIGVVASAIALHEPLGPSQIVALLFTLAGVALATR 297 AAL RLPASVAAIGT+ VPVIGV+ASA+AL EPLG ++I AL FT+AGV LA+R Sbjct: 262 AALQRLPASVAAIGTLLVPVIGVLASAVALGEPLGAAKIAALGFTIAGVVLASR 315 >ref|NP_948317.1| DMT family permease [Rhodopseudomonas palustris CGA009] ref|YP_001992301.1| hypothetical protein Rpal_3324 [Rhodopseudomonas palustris TIE-1] emb|CAE28417.1| Permeases of the drug/metabolite transporter (DMT) superfamily [Rhodopseudomonas palustris CGA009] gb|ACF01826.1| protein of unknown function DUF6 transmembrane [Rhodopseudomonas palustris TIE-1] Length = 299 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 179/290 (61%), Positives = 221/290 (76%) Query: 8 ARPRLAPAGLMFLAITSVGWGFNWPSTKFLLSELPPLTLRGTTGVIGAVLLAVLAVIRAQ 67 AR R+A GL+FL +T+V WG +WP TK+L+S+ PPL LRG TG+ G++ L A +R Sbjct: 9 ARGRIASGGLVFLTVTTVAWGLSWPVTKYLISQWPPLPLRGLTGIAGSLALFGYAALRGD 68 Query: 68 SLHVEKRLWPRLVLYAALNVTGWMVLMGLALLWLPASEAALIAYTMPVWASLLAWPVLGE 127 SL V + RLV+ A NVT WM +MGLALLWLPA E A+IAYTMPVW +LLAWP+LGE Sbjct: 69 SLAVPRDQRLRLVISAFFNVTLWMAVMGLALLWLPAGETAVIAYTMPVWTALLAWPLLGE 128 Query: 128 RPTLLRTIALVMAFAGLAAIMGGSGISASKEKLPGIIMALGGAFGFALGTVLAKKYPLVM 187 R TL R AL +AF G+AA+MG +G +AS KLPGI++AL GA GFALGT+ K++P+ + Sbjct: 129 RLTLRRVAALALAFGGIAALMGAAGFAASMTKLPGILLALTGALGFALGTIFLKRFPIAL 188 Query: 188 PPIPAAAWQIGLGCVPIAIVGLLIETTHLDRITTVGWWLLVYSTLIQFCVAYVAWFAALA 247 P +AAWQIGLGC+P+A++GL E H+ +T +GW LVY +IQFC+AYV WFAAL Sbjct: 189 PGATSAAWQIGLGCIPVAVIGLAFEIPHVSVLTPLGWAGLVYLVVIQFCIAYVCWFAALQ 248 Query: 248 RLPASVAAIGTMAVPVIGVVASAIALHEPLGPSQIVALLFTLAGVALATR 297 RLPASVAAIGTMA PVIGVVASA+ALHEPLG QI AL+ TL GVALATR Sbjct: 249 RLPASVAAIGTMATPVIGVVASAVALHEPLGVGQIAALVMTLTGVALATR 298