BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0118.0022.p (289 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774533.1| beta-lactamase [Bradyrhizobium japonicum USDA 1... 489 e-136 gb|AAL34510.1|AF421147_1 putative beta-lactamase [Bradyrhizobium... 487 e-135 ref|YP_001237352.1| putative metallo-beta-lactamase superfamily ... 448 e-124 ref|YP_001208267.1| putative metallo-beta-lactamase superfamily ... 440 e-121 ref|ZP_06840752.1| beta-lactamase domain protein [Burkholderia s... 341 9e-92 >ref|NP_774533.1| beta-lactamase [Bradyrhizobium japonicum USDA 110] dbj|BAC53158.1| blr7893 [Bradyrhizobium japonicum USDA 110] Length = 291 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 225/289 (77%), Positives = 248/289 (85%) Query: 1 MRLKFAAGDLTIHRIVEQETTFLPAHDMLPGLTPDVLAENRGWMQATGALDDSDTLILAF 60 M LK++ GDLTIHR++EQET+F+PA +MLPGLTP+VL ENR WM+ ALDD+D L+L F Sbjct: 3 MSLKYSVGDLTIHRVIEQETSFVPALEMLPGLTPEVLTENRAWMRQAKALDDNDVLLLCF 62 Query: 61 QSYVVKTPHHTILIDSCIGNDKPRPARPKWNMKTDDNYLRSLASAGFSVADIDYVMCTHL 120 QSYVVKTPHHTILIDSCIGNDKPRP RPKWNMKTDD YL +L +AGFS DID+VMCTHL Sbjct: 63 QSYVVKTPHHTILIDSCIGNDKPRPNRPKWNMKTDDTYLGALGAAGFSPGDIDFVMCTHL 122 Query: 121 HVDHVGWNTRLENGRWVPTFPNARYVFDKAEFDYWTESNAKAEVPPFVDSVLPVVEAKRS 180 HVDHVGWNTRLENGRWVPTFP ARYVF K EFD+W+ NAK E+PPFVDSVLPVVEAKR Sbjct: 123 HVDHVGWNTRLENGRWVPTFPKARYVFAKQEFDHWSAQNAKTEIPPFVDSVLPVVEAKRH 182 Query: 181 EIVGHDFAIGDHARILPTPGHTPGHVAFAFGRGKDAAVFSGDLMHSPIQTHYPELSAKFD 240 E VG+D IGDH RILPTPGHTPGH+A GRGKD AVFSGDLMHSP+QT YPELS KFD Sbjct: 183 EFVGNDHQIGDHVRILPTPGHTPGHIAITVGRGKDDAVFSGDLMHSPLQTLYPELSIKFD 242 Query: 241 VDQTQAAKTRRGFLERYCDTDTLCCPAHFPSPSIGKIRRKGNGFVCETV 289 VD +AA TRR FLERYCDT+TLCC AHFPSPS+GKIRRKGN FVC V Sbjct: 243 VDPAKAATTRRSFLERYCDTETLCCTAHFPSPSVGKIRRKGNAFVCAAV 291 >gb|AAL34510.1|AF421147_1 putative beta-lactamase [Bradyrhizobium japonicum] Length = 289 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 224/289 (77%), Positives = 248/289 (85%) Query: 1 MRLKFAAGDLTIHRIVEQETTFLPAHDMLPGLTPDVLAENRGWMQATGALDDSDTLILAF 60 M LK++ GDLTIHR++EQET+F+PA +MLPGLTP+VL ENR WM+ ALDD+D L+L F Sbjct: 1 MSLKYSVGDLTIHRVIEQETSFVPALEMLPGLTPEVLTENRAWMRQAKALDDNDVLLLCF 60 Query: 61 QSYVVKTPHHTILIDSCIGNDKPRPARPKWNMKTDDNYLRSLASAGFSVADIDYVMCTHL 120 +SYVVKTPHHTILIDSCIGNDKPRP RPKWNMKTDD YL +L +AGFS DID+VMCTHL Sbjct: 61 KSYVVKTPHHTILIDSCIGNDKPRPNRPKWNMKTDDTYLGALGAAGFSPGDIDFVMCTHL 120 Query: 121 HVDHVGWNTRLENGRWVPTFPNARYVFDKAEFDYWTESNAKAEVPPFVDSVLPVVEAKRS 180 HVDHVGWNTRLENGRWVPTFP ARYVF K EFD+W+ NAK E+PPFVDSVLPVVEAKR Sbjct: 121 HVDHVGWNTRLENGRWVPTFPKARYVFAKQEFDHWSAQNAKTEIPPFVDSVLPVVEAKRH 180 Query: 181 EIVGHDFAIGDHARILPTPGHTPGHVAFAFGRGKDAAVFSGDLMHSPIQTHYPELSAKFD 240 E VG+D IGDH RILPTPGHTPGH+A GRGKD AVFSGDLMHSP+QT YPELS KFD Sbjct: 181 EFVGNDHQIGDHVRILPTPGHTPGHIAITVGRGKDDAVFSGDLMHSPLQTLYPELSIKFD 240 Query: 241 VDQTQAAKTRRGFLERYCDTDTLCCPAHFPSPSIGKIRRKGNGFVCETV 289 VD +AA TRR FLERYCDT+TLCC AHFPSPS+GKIRRKGN FVC V Sbjct: 241 VDPAKAATTRRSFLERYCDTETLCCTAHFPSPSVGKIRRKGNAFVCAAV 289 >ref|YP_001237352.1| putative metallo-beta-lactamase superfamily protein [Bradyrhizobium sp. BTAi1] gb|ABQ33446.1| putative metallo-beta-lactamase superfamily protein [Bradyrhizobium sp. BTAi1] Length = 288 Score = 448 bits (1152), Expect = e-124, Method: Compositional matrix adjust. Identities = 211/289 (73%), Positives = 237/289 (82%), Gaps = 1/289 (0%) Query: 1 MRLKFAAGDLTIHRIVEQETTFLPAHDMLPGLTPDVLAENRGWMQATGALDDSDTLILAF 60 M L F+ DLTIHRI+EQETTFLPA ++ P LTP++L R +QA ALD DTLIL F Sbjct: 1 MALTFSVADLTIHRIIEQETTFLPAREIFPELTPEMLDAERSTLQAANALDAQDTLILCF 60 Query: 61 QSYVVKTPHHTILIDSCIGNDKPRPARPKWNMKTDDNYLRSLASAGFSVADIDYVMCTHL 120 QSYVVKTPHHTILIDSCIGNDKPR ARP WNMKTDD Y+R+L +AG SV DID VMCTHL Sbjct: 61 QSYVVKTPHHTILIDSCIGNDKPR-ARPVWNMKTDDTYMRALDAAGMSVDDIDIVMCTHL 119 Query: 121 HVDHVGWNTRLENGRWVPTFPNARYVFDKAEFDYWTESNAKAEVPPFVDSVLPVVEAKRS 180 H DHVGWNTR +N RWVPTFPNARY+F + E+DYW NAKAEVPPF DSVLPVVEAKR+ Sbjct: 120 HTDHVGWNTRRDNDRWVPTFPNARYLFAQREYDYWVAQNAKAEVPPFADSVLPVVEAKRA 179 Query: 181 EIVGHDFAIGDHARILPTPGHTPGHVAFAFGRGKDAAVFSGDLMHSPIQTHYPELSAKFD 240 +IV DFAIGDH R++PTPGHTPGHVA A G+GKD AVF+GDL+HSP+Q YPELS KFD Sbjct: 180 DIVMDDFAIGDHVRLVPTPGHTPGHVAIALGKGKDDAVFAGDLIHSPLQLAYPELSPKFD 239 Query: 241 VDQTQAAKTRRGFLERYCDTDTLCCPAHFPSPSIGKIRRKGNGFVCETV 289 VD QAA TRR FLERY DT T+CC AHFPSPS G+I+RKGNGF CE + Sbjct: 240 VDPAQAAVTRRTFLERYGDTATVCCTAHFPSPSAGRIKRKGNGFSCEAI 288 >ref|YP_001208267.1| putative metallo-beta-lactamase superfamily protein [Bradyrhizobium sp. ORS 278] emb|CAL80052.1| putative metallo-beta-lactamase superfamily protein [Bradyrhizobium sp. ORS 278] Length = 289 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 208/287 (72%), Positives = 232/287 (80%), Gaps = 1/287 (0%) Query: 3 LKFAAGDLTIHRIVEQETTFLPAHDMLPGLTPDVLAENRGWMQATGALDDSDTLILAFQS 62 L F+ D IHRI+EQETTFLPA +M P LTP++LA R +QA ALD D LIL FQS Sbjct: 4 LTFSINDTAIHRIIEQETTFLPAREMFPDLTPEMLAAERTALQAAKALDAQDMLILCFQS 63 Query: 63 YVVKTPHHTILIDSCIGNDKPRPARPKWNMKTDDNYLRSLASAGFSVADIDYVMCTHLHV 122 YVVKTPHHTILIDSCIGNDKPR ARP WNMK+D+ Y+R+LA+AG SV DID VMCTHLH Sbjct: 64 YVVKTPHHTILIDSCIGNDKPR-ARPVWNMKSDETYMRALAAAGVSVDDIDVVMCTHLHT 122 Query: 123 DHVGWNTRLENGRWVPTFPNARYVFDKAEFDYWTESNAKAEVPPFVDSVLPVVEAKRSEI 182 DHVGWNTRL+NGRWVPTFP ARYVF + E+DYW NAKAEVPPF DSVLPVVEA R++I Sbjct: 123 DHVGWNTRLDNGRWVPTFPRARYVFAQTEYDYWVAQNAKAEVPPFADSVLPVVEANRADI 182 Query: 183 VGHDFAIGDHARILPTPGHTPGHVAFAFGRGKDAAVFSGDLMHSPIQTHYPELSAKFDVD 242 VG DFAIGDH R+LPTPGHTPGHVA A G+ +D AVF+GDL+HSP+Q YPELS KFDVD Sbjct: 183 VGGDFAIGDHVRLLPTPGHTPGHVAIAVGKERDDAVFAGDLIHSPLQLAYPELSPKFDVD 242 Query: 243 QTQAAKTRRGFLERYCDTDTLCCPAHFPSPSIGKIRRKGNGFVCETV 289 AA TRR FL+RYC T TLCC AHFPSPSIG+I RKGN F C V Sbjct: 243 GKLAALTRRAFLDRYCGTATLCCTAHFPSPSIGRIGRKGNAFACAAV 289 >ref|ZP_06840752.1| beta-lactamase domain protein [Burkholderia sp. Ch1-1] gb|EFG71472.1| beta-lactamase domain protein [Burkholderia sp. Ch1-1] Length = 288 Score = 341 bits (874), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 152/275 (55%), Positives = 197/275 (71%) Query: 5 FAAGDLTIHRIVEQETTFLPAHDMLPGLTPDVLAENRGWMQATGALDDSDTLILAFQSYV 64 F +L IHRIV+ + + A M P LT DVLA NR W+Q GAL D ++L FQSY+ Sbjct: 2 FHCDELKIHRIVDYQGAMVAATTMFPDLTEDVLAANRSWLQGIGALSPDDRIVLCFQSYL 61 Query: 65 VKTPHHTILIDSCIGNDKPRPARPKWNMKTDDNYLRSLASAGFSVADIDYVMCTHLHVDH 124 ++TP+H +L+D+CIGNDK R RP W+ + D+ YLR+LA G + AD+D+V+CTHLHVDH Sbjct: 62 IQTPNHVVLVDTCIGNDKERQTRPHWHHRRDETYLRALARIGMTPADVDFVLCTHLHVDH 121 Query: 125 VGWNTRLENGRWVPTFPNARYVFDKAEFDYWTESNAKAEVPPFVDSVLPVVEAKRSEIVG 184 VGWNTRLENGRWVPTFPNARY+F E +W N + VP +DSVLPV+EA R+E+V Sbjct: 122 VGWNTRLENGRWVPTFPNARYLFSAKEMAFWAARNQEQPVPHLIDSVLPVIEAGRAELVR 181 Query: 185 HDFAIGDHARILPTPGHTPGHVAFAFGRGKDAAVFSGDLMHSPIQTHYPELSAKFDVDQT 244 + +H R++PTPGHT HV A GR +D+AV +GDL+HSP+Q +P+LS D D Sbjct: 182 NTHECSEHVRLIPTPGHTVDHVGIALGRNRDSAVVTGDLIHSPLQLRHPQLSMLRDFDPL 241 Query: 245 QAAKTRRGFLERYCDTDTLCCPAHFPSPSIGKIRR 279 A TRR FLERY +T+TLCC AHFP+PS+G+I R Sbjct: 242 VATATRRRFLERYAETETLCCAAHFPTPSVGRILR 276