BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0118.0020.p (283 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774531.1| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [... 537 e-151 ref|YP_001237354.1| putative 2-hydroxyhepta-2,4-diene-1,7-dioate... 532 e-149 ref|YP_001208265.1| 2-hydroxyhepta-2,4-diene-1,7-dioate isomeras... 526 e-147 ref|ZP_08628530.1| 2-keto-4-pentenoate hydratase/2-oxohepta-3-en... 458 e-127 ref|NP_949761.1| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [... 457 e-127 >ref|NP_774531.1| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [Bradyrhizobium japonicum USDA 110] dbj|BAC53156.1| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [Bradyrhizobium japonicum USDA 110] Length = 280 Score = 537 bits (1384), Expect = e-151, Method: Compositional matrix adjust. Identities = 256/280 (91%), Positives = 269/280 (96%) Query: 4 MKLVRYGEKGAEKPGLIDKSGQLRDLSAHLKDLTGDAYTPESLKKLAALDPASLPAVAGK 63 MKLVRYGEKGAEKPGLIDKSGQLRDLSAH+KDLTG+AY+PESLKKLAALDPASLPAV+GK Sbjct: 1 MKLVRYGEKGAEKPGLIDKSGQLRDLSAHVKDLTGEAYSPESLKKLAALDPASLPAVSGK 60 Query: 64 PRFGAPVTGISKFVAIGLNYSDHAKETGNPIPSEPIFFLKANTALSGPNDPVEKPRGSTK 123 PRFGAPVTGISKFVAIGLNYSDHAKETG IP+EPI F+KANT+LSGPND VEKPRGSTK Sbjct: 61 PRFGAPVTGISKFVAIGLNYSDHAKETGAAIPTEPIIFMKANTSLSGPNDAVEKPRGSTK 120 Query: 124 LDWEVEIAAIIGTRAKYVSEADALNHVAGYCICNDVSERNFQIERLGQWTKGKSHDTFGP 183 LDWEVEIAAIIGTRAKYVSEADALN+VAGYC+CNDVSERNFQ ERLGQWTKGKSHDTFGP Sbjct: 121 LDWEVEIAAIIGTRAKYVSEADALNYVAGYCVCNDVSERNFQTERLGQWTKGKSHDTFGP 180 Query: 184 VGPWLATKDEIADVQKLSMWLDVNGQRRQTGTTSTMIFTMAKCISYVSQFMTLLPGDIVT 243 VGPWLATKDEI DVQ LSMWLDVNGQRRQTG+T TMIF+MAKCISYVSQFMTLLPGDI+T Sbjct: 181 VGPWLATKDEIKDVQNLSMWLDVNGQRRQTGSTKTMIFSMAKCISYVSQFMTLLPGDIIT 240 Query: 244 TGTPPGVGTGMKPPQYLNVGDVVTLGIEGLGEQRQEIVGA 283 TGTPPGVG GMKPP +LNVGDVVTLGIEGLGEQRQEIV A Sbjct: 241 TGTPPGVGLGMKPPTFLNVGDVVTLGIEGLGEQRQEIVAA 280 >ref|YP_001237354.1| putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [Bradyrhizobium sp. BTAi1] gb|ABQ33448.1| putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [Bradyrhizobium sp. BTAi1] Length = 280 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 258/280 (92%), Positives = 265/280 (94%) Query: 4 MKLVRYGEKGAEKPGLIDKSGQLRDLSAHLKDLTGDAYTPESLKKLAALDPASLPAVAGK 63 MKLVRYGEKGAEKPGLID SGQLRDLSAH+KDL G AY PESLKKLAALDPASLPAVAGK Sbjct: 1 MKLVRYGEKGAEKPGLIDASGQLRDLSAHVKDLDGAAYAPESLKKLAALDPASLPAVAGK 60 Query: 64 PRFGAPVTGISKFVAIGLNYSDHAKETGNPIPSEPIFFLKANTALSGPNDPVEKPRGSTK 123 PR GAPVTGISKFVAIGLNYSDHAKETGNPIP+EPIFFLKANTAL GP DPVEKPRGSTK Sbjct: 61 PRLGAPVTGISKFVAIGLNYSDHAKETGNPIPAEPIFFLKANTALCGPYDPVEKPRGSTK 120 Query: 124 LDWEVEIAAIIGTRAKYVSEADALNHVAGYCICNDVSERNFQIERLGQWTKGKSHDTFGP 183 LDWEVEIAAIIGTRAKYVSEA+ALNH+AGY ICNDVSERNFQIERLGQWTKGKSHDTFGP Sbjct: 121 LDWEVEIAAIIGTRAKYVSEAEALNHIAGYTICNDVSERNFQIERLGQWTKGKSHDTFGP 180 Query: 184 VGPWLATKDEIADVQKLSMWLDVNGQRRQTGTTSTMIFTMAKCISYVSQFMTLLPGDIVT 243 VGPWL TKDEI DVQ LSMWLDVNGQRRQTGTT+TMIF+MAKCISYVSQFMTLLPGDIVT Sbjct: 181 VGPWLVTKDEIPDVQNLSMWLDVNGQRRQTGTTATMIFSMAKCISYVSQFMTLLPGDIVT 240 Query: 244 TGTPPGVGTGMKPPQYLNVGDVVTLGIEGLGEQRQEIVGA 283 TGTPPGVG GMKPP +LNVGDVVTLGIE LGEQRQEIV A Sbjct: 241 TGTPPGVGMGMKPPTFLNVGDVVTLGIERLGEQRQEIVEA 280 >ref|YP_001208265.1| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [Bradyrhizobium sp. ORS 278] emb|CAL80050.1| putative Isomerase/Decarboxylase related protein family; putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [Bradyrhizobium sp. ORS 278] Length = 280 Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust. Identities = 255/280 (91%), Positives = 263/280 (93%) Query: 4 MKLVRYGEKGAEKPGLIDKSGQLRDLSAHLKDLTGDAYTPESLKKLAALDPASLPAVAGK 63 MKLVRYG+KGAEKPGLID SGQLRDLSAH+KDL G AY PESLKKLAALDPASLPAV+G Sbjct: 1 MKLVRYGDKGAEKPGLIDASGQLRDLSAHVKDLDGAAYAPESLKKLAALDPASLPAVSGT 60 Query: 64 PRFGAPVTGISKFVAIGLNYSDHAKETGNPIPSEPIFFLKANTALSGPNDPVEKPRGSTK 123 PR GAPVTGISKFVAIGLNYSDHAKETGNPIP+EPIFFLKANT+L GP D VEKPRGSTK Sbjct: 61 PRLGAPVTGISKFVAIGLNYSDHAKETGNPIPAEPIFFLKANTSLCGPYDQVEKPRGSTK 120 Query: 124 LDWEVEIAAIIGTRAKYVSEADALNHVAGYCICNDVSERNFQIERLGQWTKGKSHDTFGP 183 LDWEVEIAAIIGTRAKYVSEADALNHVAGY ICNDVSERNFQIERLGQWTKGKSHDTFGP Sbjct: 121 LDWEVEIAAIIGTRAKYVSEADALNHVAGYTICNDVSERNFQIERLGQWTKGKSHDTFGP 180 Query: 184 VGPWLATKDEIADVQKLSMWLDVNGQRRQTGTTSTMIFTMAKCISYVSQFMTLLPGDIVT 243 VGPWL TKDEI DVQ LSMWLDVNGQRRQTGTT+TMIF+MAKCISYVSQFMTLLPGDIVT Sbjct: 181 VGPWLVTKDEIPDVQNLSMWLDVNGQRRQTGTTATMIFSMAKCISYVSQFMTLLPGDIVT 240 Query: 244 TGTPPGVGTGMKPPQYLNVGDVVTLGIEGLGEQRQEIVGA 283 TGTPPGVG GMKPP +LNVGDVVTLGIE LGEQRQEIV A Sbjct: 241 TGTPPGVGMGMKPPTFLNVGDVVTLGIERLGEQRQEIVEA 280 >ref|ZP_08628530.1| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08854.1| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Bradyrhizobiaceae bacterium SG-6C] Length = 297 Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust. Identities = 217/282 (76%), Positives = 244/282 (86%) Query: 2 INMKLVRYGEKGAEKPGLIDKSGQLRDLSAHLKDLTGDAYTPESLKKLAALDPASLPAVA 61 ++MKLVRYG G EKPGL+D+SG++RDLSA +KD+ GDA +P +L K+AA+DPASLP V Sbjct: 16 LSMKLVRYGAAGQEKPGLLDRSGRIRDLSALVKDIDGDALSPAALAKIAAVDPASLPLVD 75 Query: 62 GKPRFGAPVTGISKFVAIGLNYSDHAKETGNPIPSEPIFFLKANTALSGPNDPVEKPRGS 121 G PR GAPVTGI+KFVAIGLNY+DHA E G PIPSEPI F+KANT+L GPND VEKPRGS Sbjct: 76 GDPRLGAPVTGITKFVAIGLNYADHAAEAGMPIPSEPIVFMKANTSLCGPNDNVEKPRGS 135 Query: 122 TKLDWEVEIAAIIGTRAKYVSEADALNHVAGYCICNDVSERNFQIERLGQWTKGKSHDTF 181 TKLDWEVE+A IIGTRAKYV+EADAL HVAGY +CNDVSERNFQIER GQWTKGKSHDTF Sbjct: 136 TKLDWEVELAIIIGTRAKYVTEADALKHVAGYAVCNDVSERNFQIERGGQWTKGKSHDTF 195 Query: 182 GPVGPWLATKDEIADVQKLSMWLDVNGQRRQTGTTSTMIFTMAKCISYVSQFMTLLPGDI 241 GPVGPWL T DEIADV KL MWLDVNG R QTG+T+TMIF + K I+YVS MTL PGDI Sbjct: 196 GPVGPWLVTADEIADVHKLGMWLDVNGTRCQTGSTATMIFNVPKIIAYVSGLMTLYPGDI 255 Query: 242 VTTGTPPGVGTGMKPPQYLNVGDVVTLGIEGLGEQRQEIVGA 283 +TTGTPPGVG GMKPP++LN GDVVTLGI+GLG QRQEIV A Sbjct: 256 ITTGTPPGVGMGMKPPKFLNAGDVVTLGIDGLGAQRQEIVAA 297 >ref|NP_949761.1| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [Rhodopseudomonas palustris CGA009] emb|CAE29866.1| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [Rhodopseudomonas palustris CGA009] Length = 280 Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust. Identities = 216/280 (77%), Positives = 241/280 (86%) Query: 4 MKLVRYGEKGAEKPGLIDKSGQLRDLSAHLKDLTGDAYTPESLKKLAALDPASLPAVAGK 63 MKLVRYG G EKPGLIDK GQLRDLS + DL GDA++P L KLAALD A LPAV G Sbjct: 1 MKLVRYGAIGHEKPGLIDKDGQLRDLSGQIADLAGDAFSPAGLAKLAALDVAGLPAVPGH 60 Query: 64 PRFGAPVTGISKFVAIGLNYSDHAKETGNPIPSEPIFFLKANTALSGPNDPVEKPRGSTK 123 PR G+PV G KF+AIGLNY+DHA E PIP+EPI F+KA +L GPND VEKPRGSTK Sbjct: 61 PRLGSPVGGAPKFIAIGLNYADHAAEANMPIPAEPIVFMKAINSLCGPNDDVEKPRGSTK 120 Query: 124 LDWEVEIAAIIGTRAKYVSEADALNHVAGYCICNDVSERNFQIERLGQWTKGKSHDTFGP 183 LDWEVE+A IIGTRAKYV+EADALN+VAGY +CNDVSERNFQ+ER GQWTKGKSHDTFGP Sbjct: 121 LDWEVELAVIIGTRAKYVTEADALNYVAGYAVCNDVSERNFQLERAGQWTKGKSHDTFGP 180 Query: 184 VGPWLATKDEIADVQKLSMWLDVNGQRRQTGTTSTMIFTMAKCISYVSQFMTLLPGDIVT 243 +GPW+ATKDEIADV KL MWLDVNGQRRQTG+T+TMIF + K +SY+S+ MTL+PGDI+T Sbjct: 181 LGPWVATKDEIADVHKLGMWLDVNGQRRQTGSTATMIFNVPKIVSYLSELMTLMPGDIIT 240 Query: 244 TGTPPGVGTGMKPPQYLNVGDVVTLGIEGLGEQRQEIVGA 283 TGTPPGVGTGMKPPQYLNVGDVVTLGIEGLGEQ+Q IV A Sbjct: 241 TGTPPGVGTGMKPPQYLNVGDVVTLGIEGLGEQKQTIVAA 280