BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0118.0019.p (217 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAT49894.1| PA1315 [synthetic construct] 198 6e-49 ref|NP_250006.1| transcriptional regulator [Pseudomonas aerugino... 197 6e-49 ref|YP_001349430.1| putative transcriptional regulator [Pseudomo... 196 2e-48 ref|YP_003980316.1| TetR family transcriptional regulator [Achro... 175 4e-42 gb|EGP42498.1| TetR family regulatory protein 20 [Achromobacter ... 174 6e-42 >gb|AAT49894.1| PA1315 [synthetic construct] Length = 205 Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 96/192 (50%), Positives = 126/192 (65%) Query: 21 RWRRTQPAEVRVDDLMSAAAALFITKGIEATTIDDIAARAGVAKGTFYHYFSTKADVIIA 80 R RT+PAEVR+++LM+AA LF+ KG++ATTI DI A AGVAKGTFYHYF K D+++A Sbjct: 11 RQPRTKPAEVRLEELMAAAQQLFLDKGVDATTISDIVAAAGVAKGTFYHYFQAKTDILLA 70 Query: 81 LRARFAQDFLARVAAAIAERAAHDHPGRLSAWLRGAVGTYLANVELHDVVFHDFPHHQRQ 140 LR RF Q F R+A A+ A+DHPGRL AW + YL LHDVV+ + HHQR Sbjct: 71 LRERFTQAFQQRIANAVEACPANDHPGRLRAWTESGLAGYLEGYRLHDVVYSEHHHHQRG 130 Query: 141 SQEKDDVIAQIVAVLEDGRTAGVWAFPDARSAALIVFDGMHAVADDAIVAGTRDPGPPCR 200 +QE+D V+ Q+ +LE+G AG W + R AL+++ G+H ADDAI G D P Sbjct: 131 NQERDRVLEQLAELLENGAAAGAWPLRNPRLNALLLYSGLHGAADDAIAGGRLDTQPLAG 190 Query: 201 LLEEMFTRMLAA 212 L + F R+L A Sbjct: 191 ELADAFLRLLGA 202 >ref|NP_250006.1| transcriptional regulator [Pseudomonas aeruginosa PAO1] ref|ZP_01364684.1| hypothetical protein PaerPA_01001794 [Pseudomonas aeruginosa PACS2] ref|YP_791930.1| putative transcriptional regulator [Pseudomonas aeruginosa UCBPP-PA14] ref|YP_002441450.1| putative transcriptional regulator [Pseudomonas aeruginosa LESB58] ref|ZP_04927760.1| hypothetical protein PACG_00286 [Pseudomonas aeruginosa C3719] ref|ZP_04933010.1| hypothetical protein PA2G_00309 [Pseudomonas aeruginosa 2192] ref|ZP_07792547.1| putative transcriptional regulator [Pseudomonas aeruginosa 39016] gb|AAG04704.1|AE004560_12 probable transcriptional regulator [Pseudomonas aeruginosa PAO1] gb|ABJ10503.1| putative transcriptional regulator [Pseudomonas aeruginosa UCBPP-PA14] gb|EAZ51879.1| hypothetical protein PACG_00286 [Pseudomonas aeruginosa C3719] gb|EAZ57129.1| hypothetical protein PA2G_00309 [Pseudomonas aeruginosa 2192] emb|CAW28594.1| probable transcriptional regulator [Pseudomonas aeruginosa LESB58] gb|EFQ37643.1| putative transcriptional regulator [Pseudomonas aeruginosa 39016] gb|EGM20419.1| putative transcriptional regulator [Pseudomonas aeruginosa 138244] dbj|GAA16856.1| probable transcriptional regulator [Pseudomonas aeruginosa NCMG1179] gb|AEO76069.1| putative transcriptional regulator [Pseudomonas aeruginosa M18] dbj|BAK89059.1| putative transcriptional regulator [Pseudomonas aeruginosa NCGM2.S1] Length = 204 Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 96/192 (50%), Positives = 126/192 (65%) Query: 21 RWRRTQPAEVRVDDLMSAAAALFITKGIEATTIDDIAARAGVAKGTFYHYFSTKADVIIA 80 R RT+PAEVR+++LM+AA LF+ KG++ATTI DI A AGVAKGTFYHYF K D+++A Sbjct: 11 RQPRTKPAEVRLEELMAAAQQLFLDKGVDATTISDIVAAAGVAKGTFYHYFQAKTDILLA 70 Query: 81 LRARFAQDFLARVAAAIAERAAHDHPGRLSAWLRGAVGTYLANVELHDVVFHDFPHHQRQ 140 LR RF Q F R+A A+ A+DHPGRL AW + YL LHDVV+ + HHQR Sbjct: 71 LRERFTQAFQQRIANAVEACPANDHPGRLRAWTESGLAGYLEGYRLHDVVYSEHHHHQRG 130 Query: 141 SQEKDDVIAQIVAVLEDGRTAGVWAFPDARSAALIVFDGMHAVADDAIVAGTRDPGPPCR 200 +QE+D V+ Q+ +LE+G AG W + R AL+++ G+H ADDAI G D P Sbjct: 131 NQERDRVLEQLAELLENGAAAGAWPLRNPRLNALLLYSGLHGAADDAIAGGRLDTQPLAG 190 Query: 201 LLEEMFTRMLAA 212 L + F R+L A Sbjct: 191 ELADAFLRLLGA 202 >ref|YP_001349430.1| putative transcriptional regulator [Pseudomonas aeruginosa PA7] gb|ABR85474.1| probable transcriptional regulator [Pseudomonas aeruginosa PA7] Length = 204 Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 96/192 (50%), Positives = 125/192 (65%) Query: 21 RWRRTQPAEVRVDDLMSAAAALFITKGIEATTIDDIAARAGVAKGTFYHYFSTKADVIIA 80 R RT+PAEVR+++LM+AA LF+ KG++ATTI DI A AGVAKGTFYHYF K D++ A Sbjct: 11 RQPRTKPAEVRLEELMAAAQQLFLDKGVDATTISDIVAAAGVAKGTFYHYFQAKTDILQA 70 Query: 81 LRARFAQDFLARVAAAIAERAAHDHPGRLSAWLRGAVGTYLANVELHDVVFHDFPHHQRQ 140 LR RF Q F R+A A+ A+DHPGRL AW + YL LHDVV+ + HHQR Sbjct: 71 LRERFTQAFQQRIANAVEACPAYDHPGRLRAWTESGLAGYLKGYRLHDVVYSEHHHHQRG 130 Query: 141 SQEKDDVIAQIVAVLEDGRTAGVWAFPDARSAALIVFDGMHAVADDAIVAGTRDPGPPCR 200 +QE+D V+ Q+ +LE+G AG W + R AL+++ G+H ADDAI G D P Sbjct: 131 NQERDRVLEQLAELLENGAAAGAWPLRNPRLNALLLYSGLHGAADDAIAGGRLDTQPLAD 190 Query: 201 LLEEMFTRMLAA 212 L + F R+L A Sbjct: 191 ELADAFLRLLGA 202 >ref|YP_003980316.1| TetR family transcriptional regulator [Achromobacter xylosoxidans A8] gb|ADP17601.1| bacterial regulatory protein, TetR family protein 20 [Achromobacter xylosoxidans A8] Length = 209 Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 93/189 (49%), Positives = 116/189 (61%) Query: 24 RTQPAEVRVDDLMSAAAALFITKGIEATTIDDIAARAGVAKGTFYHYFSTKADVIIALRA 83 RT+PA VR+D+LM+AA ALFI KG+EA TI++I RAGVAKGTFYHYF++K D++ ALRA Sbjct: 20 RTKPAAVRLDELMAAAEALFIQKGVEAATINEIVERAGVAKGTFYHYFTSKNDMLAALRA 79 Query: 84 RFAQDFLARVAAAIAERAAHDHPGRLSAWLRGAVGTYLANVELHDVVFHDFPHHQRQSQE 143 +F+Q FL + + A D RL AW R V Y ELHDVVFHD H R E Sbjct: 80 KFSQGFLDHIDREVQACAPDDGVARLRAWTRAGVEAYFDGYELHDVVFHDAQHPDRGVAE 139 Query: 144 KDDVIAQIVAVLEDGRTAGVWAFPDARSAALIVFDGMHAVADDAIVAGTRDPGPPCRLLE 203 K V+ Q+ A+LE G AG W DA A++++ GMH D +I G RD L Sbjct: 140 KSAVLEQLEAILEAGARAGCWQLEDAALTAIVLYHGMHGAVDASIAQGRRDAQALSGPLS 199 Query: 204 EMFTRMLAA 212 MF R L A Sbjct: 200 AMFLRTLGA 208 >gb|EGP42498.1| TetR family regulatory protein 20 [Achromobacter xylosoxidans AXX-A] Length = 217 Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 96/201 (47%), Positives = 123/201 (61%) Query: 13 AATRGAAQRWRRTQPAEVRVDDLMSAAAALFITKGIEATTIDDIAARAGVAKGTFYHYFS 72 +A R A RT+PA VR+D+LM+AA LF+ +G+EATTID I A+AGVAKGTFYHYFS Sbjct: 14 SAARSTAAPAPRTKPAPVRLDELMAAAEDLFVRQGVEATTIDQIVAQAGVAKGTFYHYFS 73 Query: 73 TKADVIIALRARFAQDFLARVAAAIAERAAHDHPGRLSAWLRGAVGTYLANVELHDVVFH 132 +KADV+ ALR +F+Q FL R+ AA+A A D RL AW R V Y LHDVVFH Sbjct: 74 SKADVLAALRVKFSQGFLDRIDAAMAACAPDDGVARLRAWTRAGVHAYFDGYALHDVVFH 133 Query: 133 DFPHHQRQSQEKDDVIAQIVAVLEDGRTAGVWAFPDARSAALIVFDGMHAVADDAIVAGT 192 D H R + E+ V+AQ A+L G+ AG W A++++ GMH DD+I G Sbjct: 134 DVNHPHRGATERAAVLAQAEAMLRAGQAAGCWRLAQPALTAILLYHGMHGAVDDSIARGA 193 Query: 193 RDPGPPCRLLEEMFTRMLAAP 213 D L F R++ AP Sbjct: 194 TDAEALAASLIPPFLRLVGAP 214