BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0118.0018.p         (123 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004869070.1| hypothetical protein GLX_22880 [Gluconacetob...    51   6e-05
gb|EGP48128.1| hypothetical protein AXXA_02260 [Achromobacter xy...    47   9e-04
ref|YP_001561189.1| hypothetical protein Daci_0158 [Delftia acid...    45   0.005
ref|YP_004485557.1| hypothetical protein DelCs14_0160 [Delftia s...    45   0.005
ref|ZP_07993108.1| extensin [Neisseria mucosa C102] >gi|31740061...    40   0.18 

>ref|YP_004869070.1| hypothetical protein GLX_22880 [Gluconacetobacter xylinus NBRC
           3288]
 dbj|BAK84700.1| hypothetical protein GLX_22880 [Gluconacetobacter xylinus NBRC
           3288]
          Length = 131

 Score = 51.2 bits (121), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 44/96 (45%)

Query: 27  WTAEYGELLAANRPLAVIVNVDDQPEVAAGKPMVLWMKARKAELGRLIRVTVYIADDAEE 86
           W  E   LL  + P A+I     + +    K   LW+K  +  L RL RV + I  DA  
Sbjct: 33  WKGEMTALLERDTPFALIYPPAPEEDHDDRKERGLWLKTNREPLSRLCRVMILIEPDATR 92

Query: 87  RAELERNLPGRAKALPYPAAIAASEADALFLARASL 122
           R+ LE   PG  +A   P    AS+A+A  LA   L
Sbjct: 93  RSALEEMFPGAERAFGVPQMATASKAEAEILAHHVL 128


>gb|EGP48128.1| hypothetical protein AXXA_02260 [Achromobacter xylosoxidans AXX-A]
          Length = 150

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 27  WTAEYGELLAANRPLAV-IVNVDDQPEVAAGKPMVLWMKARKAELGRLIRVTVYIADDAE 85
           W  E   LLAA +P  V  V +D        K   LW+K  KA LGRL +  + +  DA 
Sbjct: 34  WETEMEALLAAGQPFTVAYVELDPAEPHEDRKQRGLWLKHNKARLGRLCKAQISVEPDAG 93

Query: 86  ERAELER--NLPGRAKALPYPAAIAASEADAL 115
            RAE +R   L  RA  +P+ A     EA AL
Sbjct: 94  RRAEADRQGQLAARAFGIPHEAVATLEEAVAL 125


>ref|YP_001561189.1| hypothetical protein Daci_0158 [Delftia acidovorans SPH-1]
 gb|ABX32804.1| conserved hypothetical protein [Delftia acidovorans SPH-1]
          Length = 167

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 36/66 (54%)

Query: 57  KPMVLWMKARKAELGRLIRVTVYIADDAEERAELERNLPGRAKALPYPAAIAASEADALF 116
           K +VLWMKAR+ EL  L+R  V+   DA +RAE E       KA  YP  + AS  +A  
Sbjct: 99  KQVVLWMKARRPELKSLVRALVHAEPDAHKRAEAEAFAQMFGKAWGYPMLLVASPEEAQQ 158

Query: 117 LARASL 122
            AR  L
Sbjct: 159 RARELL 164


>ref|YP_004485557.1| hypothetical protein DelCs14_0160 [Delftia sp. Cs1-4]
 gb|AEF87202.1| hypothetical protein DelCs14_0160 [Delftia sp. Cs1-4]
          Length = 127

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 37/66 (56%)

Query: 57  KPMVLWMKARKAELGRLIRVTVYIADDAEERAELERNLPGRAKALPYPAAIAASEADALF 116
           K +VLWMKAR+ EL  L+R  V+   DA++RAE E       KA  YP  + AS  +A  
Sbjct: 59  KQVVLWMKARRPELKSLVRALVHAEPDAQKRAEAEAFAQMFGKAWGYPMLLVASPEEAQQ 118

Query: 117 LARASL 122
            AR  L
Sbjct: 119 RARELL 124


>ref|ZP_07993108.1| extensin [Neisseria mucosa C102]
 gb|EFV81276.1| extensin [Neisseria mucosa C102]
          Length = 132

 Score = 39.7 bits (91), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 50/129 (38%), Gaps = 7/129 (5%)

Query: 1   MKFFREAE--PGIFIATGRLQTEQDGCDWTAEYGELLAANRPLAVIVN-----VDDQPEV 53
           M +F  A+  P   I    L    D  DW AE+  LL  NR  A +       V D+  +
Sbjct: 1   MHYFTPAKTLPEGTIYLTDLTHVADFADWLAEFETLLNQNRRFATVCTPMRRQVSDEQRI 60

Query: 54  AAGKPMVLWMKARKAELGRLIRVTVYIADDAEERAELERNLPGRAKALPYPAAIAASEAD 113
           A  K  + W+KA + +L       + I  DA + A           AL     + A E  
Sbjct: 61  ADRKTYIEWIKAHRPQLSERCAAMLLIEPDAAQLAFFREQSSKLGPALGVNYIVEADEQT 120

Query: 114 ALFLARASL 122
           AL  A  +L
Sbjct: 121 ALLRAEEAL 129