BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0118.0007.p (322 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767997.1| peptide ABC transporter ATP-binding protein [Br... 580 e-163 ref|ZP_02187598.1| peptide ABC transporter ATP-binding protein [... 486 e-135 ref|YP_001203247.1| oligopeptide ABC transporter ATP-binding pro... 458 e-127 ref|YP_001242744.1| oligopeptide ABC transporter ATP-binding pro... 458 e-127 ref|YP_003639568.1| oligopeptide/dipeptide ABC transporter, ATPa... 446 e-123 >ref|NP_767997.1| peptide ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46622.1| peptide ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 322 Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust. Identities = 283/322 (87%), Positives = 296/322 (91%) Query: 1 MSEPLLRVSNLKKHFPVLGGLLSREVGQVYAVDGVSFSVNRGETLGLVGESGCGKSTTGR 60 MSEPLLRVS LKKHFPVLGGLLSR+VG VYAVDGVSFSVNRGETLGLVGESGCGKSTTGR Sbjct: 1 MSEPLLRVSGLKKHFPVLGGLLSRQVGSVYAVDGVSFSVNRGETLGLVGESGCGKSTTGR 60 Query: 61 CVLRLIEPTSGEIVFDGRSVTGLGGGDLRAMRRNMQLVFQDPFASLNPRMTVGAILGEPF 120 CVLRLIEPT GE+ FDG+ V LGG DLRAMRRNMQLVFQDPFASLNPRMTVG ILGE Sbjct: 61 CVLRLIEPTDGEVTFDGQDVRQLGGNDLRAMRRNMQLVFQDPFASLNPRMTVGTILGEAL 120 Query: 121 IIHNLVTSASEREDRVASLLVKVGLKAEHMRRYPHQLSGGQRQRIAIARALTLEPKLIVC 180 +IH L +SA ERE+RVASLLVKVGLKAEHMRRYPH+ SGGQRQRI IARAL +EPKLIVC Sbjct: 121 VIHKLGSSAKEREERVASLLVKVGLKAEHMRRYPHEFSGGQRQRIVIARALAVEPKLIVC 180 Query: 181 DEPVSALDVSIQAQVINLLEDLQAELNLTYLFVAHDLSVVEHISDRVAVMYLGRIVELAK 240 DEPVSALDVSIQAQVINLLEDLQAELNLTYLFVAHDLSVVEHISDRVAVMYLGRIVELAK Sbjct: 181 DEPVSALDVSIQAQVINLLEDLQAELNLTYLFVAHDLSVVEHISDRVAVMYLGRIVELAK 240 Query: 241 ASDLYRNPQHPYTKALLSAVPVPDPKAKRDRIRLKGDVPSPMNPPKGCHFHTRCPIAEER 300 ASDLYRNPQHPYT+ALLSAVPVPDPK KR+RIRLKGDVPSPM PP GCHFHTRCPIA+ R Sbjct: 241 ASDLYRNPQHPYTRALLSAVPVPDPKLKRERIRLKGDVPSPMKPPSGCHFHTRCPIAQPR 300 Query: 301 CRQTAPELLEGRNGHSVACHLA 322 C ++APEL EG GH VACHLA Sbjct: 301 CAESAPELKEGAGGHFVACHLA 322 >ref|ZP_02187598.1| peptide ABC transporter ATP-binding protein [alpha proteobacterium BAL199] gb|EDP65940.1| peptide ABC transporter ATP-binding protein [alpha proteobacterium BAL199] Length = 324 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 228/322 (70%), Positives = 268/322 (83%), Gaps = 1/322 (0%) Query: 1 MSEPLLRVSNLKKHFPVLGGLLSREVGQVYAVDGVSFSVNRGETLGLVGESGCGKSTTGR 60 M+EPLLRV +LKKHF + GG+ +REV +VYAVDGVSF + GETLG+VGESGCGKSTTGR Sbjct: 1 MTEPLLRVKDLKKHFSIRGGVFNREVDRVYAVDGVSFDLKAGETLGVVGESGCGKSTTGR 60 Query: 61 CVLRLIEPTSGEIVFDGRSVTGLGGGDLRAMRRNMQLVFQDPFASLNPRMTVGAILGEPF 120 C+LRLIEP+ GE+ F+G+ V L G DL A+RR+MQ++FQDPFASLNPRMTVG I+GE Sbjct: 61 CILRLIEPSGGEVWFEGKDVNALNGPDLMALRRDMQIIFQDPFASLNPRMTVGGIIGEAL 120 Query: 121 IIHNLVTSASEREDRVASLLVKVGLKAEHMRRYPHQLSGGQRQRIAIARALTLEPKLIVC 180 +IH L S E EDR+ LL VGL A+HMRRYPH+ SGGQRQRI IARAL + PKLIVC Sbjct: 121 VIHKLANSQQEYEDRIVELLETVGLNADHMRRYPHEFSGGQRQRIGIARALAVSPKLIVC 180 Query: 181 DEPVSALDVSIQAQVINLLEDLQAELNLTYLFVAHDLSVVEHISDRVAVMYLGRIVELAK 240 DEPVSALDVSIQAQVINLLEDLQ + +LTY+F+AHDLSVVEHISDRVAVMYLGRIVE+A Sbjct: 181 DEPVSALDVSIQAQVINLLEDLQEKFSLTYMFIAHDLSVVEHISDRVAVMYLGRIVEIAS 240 Query: 241 ASDLYRNPQHPYTKALLSAVPVPDPKAKRDRIRLKGDVPSPMNPPKGCHFHTRCPIAE-E 299 A DLY +P HPYT+ALLSAVP+PDP +R+RIRL+GDVPSP++PP GCHFHTRCPI + Sbjct: 241 AHDLYTSPLHPYTEALLSAVPIPDPSLRRERIRLQGDVPSPIHPPSGCHFHTRCPIRQLP 300 Query: 300 RCRQTAPELLEGRNGHSVACHL 321 C +P L +G +GH VACHL Sbjct: 301 LCSTESPTLKQGEDGHWVACHL 322 >ref|YP_001203247.1| oligopeptide ABC transporter ATP-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL75010.1| Oligopeptide transport protein (ABC superfamily, ATP-binding protein) [Bradyrhizobium sp. ORS 278] Length = 342 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 215/317 (67%), Positives = 255/317 (80%) Query: 5 LLRVSNLKKHFPVLGGLLSREVGQVYAVDGVSFSVNRGETLGLVGESGCGKSTTGRCVLR 64 LL V NL K FP+ GGLL R++G V AVDGV+F + ET GLVGESGCGKSTTGRCVLR Sbjct: 25 LLTVRNLTKAFPIKGGLLKRQIGSVRAVDGVNFHIEPSETFGLVGESGCGKSTTGRCVLR 84 Query: 65 LIEPTSGEIVFDGRSVTGLGGGDLRAMRRNMQLVFQDPFASLNPRMTVGAILGEPFIIHN 124 LIEP+SGE+ F+G+ V L G +LRA+RR++Q++FQDP+ASLNPRMT+GAI+GE IH Sbjct: 85 LIEPSSGELSFEGKDVISLSGENLRALRRDIQIIFQDPYASLNPRMTIGAIIGEALTIHG 144 Query: 125 LVTSASEREDRVASLLVKVGLKAEHMRRYPHQLSGGQRQRIAIARALTLEPKLIVCDEPV 184 L +S + E+R+ LL VGL+A+HM RYPH+ SGGQRQRI IARA+ +EPKLI+CDEPV Sbjct: 145 LASSRQKYEERIVHLLETVGLQADHMTRYPHEFSGGQRQRIGIARAIAVEPKLIICDEPV 204 Query: 185 SALDVSIQAQVINLLEDLQAELNLTYLFVAHDLSVVEHISDRVAVMYLGRIVELAKASDL 244 SALDVSIQAQVINLLEDLQ + + YLFVAHDLSVVEHIS RVAVMYLGRIVE A + L Sbjct: 205 SALDVSIQAQVINLLEDLQQKFGIAYLFVAHDLSVVEHISRRVAVMYLGRIVETAPSRQL 264 Query: 245 YRNPQHPYTKALLSAVPVPDPKAKRDRIRLKGDVPSPMNPPKGCHFHTRCPIAEERCRQT 304 Y P+HPYT+ALLSAVP+PDP KR R+RLKG+VPSP+NPP GCHFHTRCPIA++ C + Sbjct: 265 YSTPKHPYTEALLSAVPIPDPSIKRKRVRLKGEVPSPINPPSGCHFHTRCPIAKDICSRE 324 Query: 305 APELLEGRNGHSVACHL 321 P L GH VACH Sbjct: 325 VPPLKASDEGHLVACHF 341 >ref|YP_001242744.1| oligopeptide ABC transporter ATP-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ38838.1| Oligopeptide ABC transporter (ATP-binding protein) [Bradyrhizobium sp. BTAi1] Length = 332 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 216/317 (68%), Positives = 254/317 (80%) Query: 5 LLRVSNLKKHFPVLGGLLSREVGQVYAVDGVSFSVNRGETLGLVGESGCGKSTTGRCVLR 64 LL V NL K FP+ GGLL R++G V AVDGVSF + ET GLVGESGCGKSTTGRCVLR Sbjct: 15 LLSVRNLTKAFPIRGGLLKRQIGSVRAVDGVSFHIEPSETFGLVGESGCGKSTTGRCVLR 74 Query: 65 LIEPTSGEIVFDGRSVTGLGGGDLRAMRRNMQLVFQDPFASLNPRMTVGAILGEPFIIHN 124 LIEP+SGE++F+G+ V L G LRA+RR++Q++FQDP+ASLNPRMT+GAI+GE IH Sbjct: 75 LIEPSSGELIFEGKDVIALSGESLRALRRDIQIIFQDPYASLNPRMTIGAIIGEALTIHG 134 Query: 125 LVTSASEREDRVASLLVKVGLKAEHMRRYPHQLSGGQRQRIAIARALTLEPKLIVCDEPV 184 L S + E+R+ LL VGL+A+HM RYPH+ SGGQRQRI IARA+ +EPKLI+CDEPV Sbjct: 135 LAASRQKYEERIVHLLETVGLQADHMTRYPHEFSGGQRQRIGIARAIAVEPKLIICDEPV 194 Query: 185 SALDVSIQAQVINLLEDLQAELNLTYLFVAHDLSVVEHISDRVAVMYLGRIVELAKASDL 244 SALDVSIQAQVINLLEDLQ + + YLFVAHDLSVVEHIS RVAVMYLGRIVE A + L Sbjct: 195 SALDVSIQAQVINLLEDLQQKFGIAYLFVAHDLSVVEHISRRVAVMYLGRIVETAPSRLL 254 Query: 245 YRNPQHPYTKALLSAVPVPDPKAKRDRIRLKGDVPSPMNPPKGCHFHTRCPIAEERCRQT 304 Y P+HPYT+ALLSAVP+PDP KR RIRLKG+VPSP++PP GCHFHTRCPIA++ C + Sbjct: 255 YSAPKHPYTEALLSAVPIPDPSVKRKRIRLKGEVPSPIDPPSGCHFHTRCPIAKDVCSKE 314 Query: 305 APELLEGRNGHSVACHL 321 P L GH VACH Sbjct: 315 VPPLKASAEGHLVACHF 331 >ref|YP_003639568.1| oligopeptide/dipeptide ABC transporter, ATPase subunit [Thermincola sp. JR] gb|ADG81667.1| oligopeptide/dipeptide ABC transporter, ATPase subunit [Thermincola potens JR] Length = 321 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 214/320 (66%), Positives = 252/320 (78%), Gaps = 2/320 (0%) Query: 3 EPLLRVSNLKKHFPVL-GGLLSREVGQVYAVDGVSFSVNRGETLGLVGESGCGKSTTGRC 61 E LL+V NLKK+FPV G + R V + AVDGVSF V +GETLGLVGESGCGKSTTGRC Sbjct: 2 EALLKVKNLKKYFPVTKGAVFHRNVAMLKAVDGVSFDVLKGETLGLVGESGCGKSTTGRC 61 Query: 62 VLRLIEPTSGEIVFDGRSVTGLGGGDLRAMRRNMQLVFQDPFASLNPRMTVGAILGEPFI 121 +LRLIEPT GE+ F+G+ + L ++R R++MQ+VFQDP+ASLNPRM V I+ EP + Sbjct: 62 ILRLIEPTDGEVYFEGKDIRALNNKEMRQTRKDMQIVFQDPYASLNPRMKVRDIIMEPIL 121 Query: 122 IHNLVTSASEREDRVASLLVKVGLKAEHMRRYPHQLSGGQRQRIAIARALTLEPKLIVCD 181 +H + S E DRV LL VGL + H RY H+ SGGQRQRI IARAL LEPKL+VCD Sbjct: 122 LHG-IASGREARDRVNKLLEVVGLASYHGDRYAHEFSGGQRQRIGIARALALEPKLVVCD 180 Query: 182 EPVSALDVSIQAQVINLLEDLQAELNLTYLFVAHDLSVVEHISDRVAVMYLGRIVELAKA 241 EPVSALDVSIQAQVINL+EDLQ E +LT+LF+AHDLSVV HISDRVAVMYLGRIVE+A Sbjct: 181 EPVSALDVSIQAQVINLMEDLQKEFHLTFLFIAHDLSVVHHISDRVAVMYLGRIVEIANY 240 Query: 242 SDLYRNPQHPYTKALLSAVPVPDPKAKRDRIRLKGDVPSPMNPPKGCHFHTRCPIAEERC 301 DLY+NP HPYTKALLSA+P+P+PKAKR++I LKGDV SP+NPP GC FHTRCP A + C Sbjct: 241 KDLYQNPLHPYTKALLSAIPIPNPKAKREKIVLKGDVISPINPPAGCSFHTRCPFATDMC 300 Query: 302 RQTAPELLEGRNGHSVACHL 321 ++ AP L E GH VACHL Sbjct: 301 KEEAPVLEEKETGHQVACHL 320