BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0118.0005.p (299 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_316970.1| beta-lactamase [Nitrobacter winogradskyi Nb-255... 306 2e-81 ref|ZP_07028680.1| Beta-lactamase [Afipia sp. 1NLS2] >gi|2985897... 293 2e-77 ref|YP_003910130.1| Beta-lactamase [Burkholderia sp. CCGE1003] >... 291 6e-77 ref|YP_433547.1| beta-lactamase class A [Hahella chejuensis KCTC... 290 2e-76 ref|YP_004106571.1| beta-lactamase [Rhodopseudomonas palustris D... 289 4e-76 >ref|YP_316970.1| beta-lactamase [Nitrobacter winogradskyi Nb-255] gb|ABA03618.1| beta-lactamase [Nitrobacter winogradskyi Nb-255] Length = 296 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 159/291 (54%), Positives = 195/291 (67%), Gaps = 1/291 (0%) Query: 1 MLTRRTFGLRALGLAVSCTLPRQGAAAGPSEPAQQLQQEFARIELATSGRLGVAALDMET 60 M++RR GLA + R G A P+ + +E R+E T GRLGVA LD T Sbjct: 1 MISRRGLWPVGAGLAGLVVMGRAGFAVAPAALQDRFVEELKRLENQTGGRLGVALLDAGT 60 Query: 61 GLRASRRGDERFPMCSTFKALASAAVLHRVDRGESSLDQQIRFEAKDILANSPVTKEHVA 120 G R DE FPMCSTFK LA+ A+L VD G+ L ++I F D++A+SP T++HV Sbjct: 61 GQHVGHRMDEPFPMCSTFKVLAAGALLQGVDAGKEDLARRIYFNEADLVAHSPETRKHVG 120 Query: 121 -SGMTLAELCEAAITRSDNTAGNMILREIGGPAGLTGFFHTIGDNVSRLDRWELALNEGV 179 +GMT+AELC+AAIT SDNTAGN++L IGGP GLT F +GD V+RLDR E LNE V Sbjct: 121 PTGMTVAELCKAAITLSDNTAGNLLLASIGGPQGLTAFARRLGDEVTRLDRIETELNESV 180 Query: 180 SGDPRDTTSPVAMLKNLQRVVLGDVLQTVSRQKLVDWMVANKTGDARLRAGVPRDWRVAD 239 GDPRDTT+P AM NL+ + LGDVL SR +LV W+VAN TGD RL AG+P WR D Sbjct: 181 PGDPRDTTTPSAMAANLRALALGDVLSVKSRTQLVGWLVANTTGDKRLCAGLPAGWRAGD 240 Query: 240 KTGTGERGTYNDIGVFWPPGRKPIVVTVYLTGASAPMEKCNEVIANVARAV 290 KTGTGERGT ND+ V WPP R P VVT YLTGA+ P ++ N V+A + RAV Sbjct: 241 KTGTGERGTANDVAVIWPPDRAPFVVTAYLTGATVPADRQNAVMAAIGRAV 291 >ref|ZP_07028680.1| Beta-lactamase [Afipia sp. 1NLS2] gb|EFI49952.1| Beta-lactamase [Afipia sp. 1NLS2] Length = 294 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 146/283 (51%), Positives = 197/283 (69%), Gaps = 8/283 (2%) Query: 1 MLTRRTF--GLRALGLAVSCTLPRQGAAAGPSEPAQQLQQEFARIELATSGRLGVAALDM 58 M TRR F G AL L V C+ + + P Q L+ + +RIE GRLGVA LD Sbjct: 1 MTTRRIFLFGTTAL-LGVGCS-----GSVALARPLQDLKSKISRIESRVKGRLGVAVLDT 54 Query: 59 ETGLRASRRGDERFPMCSTFKALASAAVLHRVDRGESSLDQQIRFEAKDILANSPVTKEH 118 + R R DERFPMCSTFK +A+AA+L RV++G+ +L++++ F D++ SP T++H Sbjct: 55 GSDRRFGYRKDERFPMCSTFKLMAAAAILKRVEQGQETLERRVHFSQSDLVTYSPATEKH 114 Query: 119 VASGMTLAELCEAAITRSDNTAGNMILREIGGPAGLTGFFHTIGDNVSRLDRWELALNEG 178 + SGMT+AELCEAAIT SDNTAGN++L +GGP G+T F +GD ++RLDR ELALNE Sbjct: 115 LESGMTVAELCEAAITLSDNTAGNLMLGMLGGPPGVTAFARALGDPLTRLDRTELALNEA 174 Query: 179 VSGDPRDTTSPVAMLKNLQRVVLGDVLQTVSRQKLVDWMVANKTGDARLRAGVPRDWRVA 238 V GDPRDTT+P AM ++L++++ G L S ++L W++ANKTGDARLRA +P WRV Sbjct: 175 VPGDPRDTTTPAAMAEDLRKLMFGGALAKASSEQLKAWLLANKTGDARLRARLPAGWRVG 234 Query: 239 DKTGTGERGTYNDIGVFWPPGRKPIVVTVYLTGASAPMEKCNE 281 DKTG+GERG+ ND+G+ WPP P++ VYLT +A M + NE Sbjct: 235 DKTGSGERGSTNDVGILWPPDAAPLIAAVYLTQTAASMNERNE 277 >ref|YP_003910130.1| Beta-lactamase [Burkholderia sp. CCGE1003] gb|ADN60839.1| Beta-lactamase [Burkholderia sp. CCGE1003] Length = 315 Score = 291 bits (746), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 154/307 (50%), Positives = 203/307 (66%), Gaps = 21/307 (6%) Query: 1 MLTRRTFGLRALGLAVS-CTLPRQGA---AAGPSEPAQQLQQ--EFAR----------IE 44 M+TRR F LG++++ L GA AG AQ +Q EFAR IE Sbjct: 1 MITRRKFAGAMLGVSIAGVALGNSGAWGKNAGSLTGAQAARQRREFARLDAIRARLVEIE 60 Query: 45 LATSGRLGVAALDMETGLRASRRGDERFPMCSTFKALASAAVLHRVDRGESSLDQQIRFE 104 + GRLGV+ +D +GL A R DERFPMCSTFK LA+ AVL RVDRGE +L ++I + Sbjct: 61 AQSGGRLGVSIVDTTSGLHAGLRADERFPMCSTFKLLAAGAVLARVDRGEENLQRRIVYS 120 Query: 105 AKDILANSPVTKEHV-----ASGMTLAELCEAAITRSDNTAGNMILREIGGPAGLTGFFH 159 +++ NSP T H ++GM++AELC+AAIT SDNTA N++L+ GGPA LT F Sbjct: 121 QSELVPNSPATSRHTRERTGSAGMSIAELCKAAITLSDNTAANLLLQSFGGPAALTAFAR 180 Query: 160 TIGDNVSRLDRWELALNEGVSGDPRDTTSPVAMLKNLQRVVLGDVLQTVSRQKLVDWMVA 219 ++GD ++RLDR E LNE GDPRDTT+P AML NL+ +V+G+ L + SR +L+ W+ A Sbjct: 181 SLGDGMTRLDRNEPTLNEAAPGDPRDTTTPNAMLGNLRALVMGEQLSSTSRVQLLAWLAA 240 Query: 220 NKTGDARLRAGVPRDWRVADKTGTGERGTYNDIGVFWPPGRKPIVVTVYLTGASAPMEKC 279 N+TG AR+RA +P+DW V DKTGTG GT ND+ + WPPGR PI+V VYLTG + +C Sbjct: 241 NETGGARIRARLPKDWGVGDKTGTGGHGTANDVAILWPPGRGPILVAVYLTGTAGTAARC 300 Query: 280 NEVIANV 286 N IA+V Sbjct: 301 NAAIADV 307 >ref|YP_433547.1| beta-lactamase class A [Hahella chejuensis KCTC 2396] gb|ABC29122.1| Beta-lactamase class A [Hahella chejuensis KCTC 2396] Length = 299 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 145/294 (49%), Positives = 196/294 (66%), Gaps = 2/294 (0%) Query: 1 MLTRRTFGLRALGLAVSCTLPRQGAAAGPSEPAQQLQQEFARIELATSGRLGVAALDMET 60 M+TRR LG A L +G ++ QL++ FA++E R+GV LD +T Sbjct: 4 MVTRRRL-TALLGSACVGGLLLFSGVSGAADKPVQLEKVFAKLEERLDARMGVMVLDTQT 62 Query: 61 GLRASRRGDERFPMCSTFKALASAAVLHRVDRGESSLDQQIRFEAKDILANSPVTKEHVA 120 G +RG ERFP+CSTFK LA AA+L +VD GE +L++++ A+DI+ SPVTK+ + Sbjct: 63 GRTWGQRGQERFPLCSTFKVLACAALLAKVDAGEENLERRVPIHARDIVTYSPVTKDRIG 122 Query: 121 -SGMTLAELCEAAITRSDNTAGNMILREIGGPAGLTGFFHTIGDNVSRLDRWELALNEGV 179 GMTL ELC+AA+T+SDNTA N++L+ +GGP LT + +GD +RLDRWE LNE Sbjct: 123 GEGMTLRELCQAAMTKSDNTAANLVLKAVGGPPRLTEYLRGLGDETTRLDRWETELNEAT 182 Query: 180 SGDPRDTTSPVAMLKNLQRVVLGDVLQTVSRQKLVDWMVANKTGDARLRAGVPRDWRVAD 239 GDPRDTTSP AM LQ + L L SRQ+L W +AN+TGDA+LRAG+P+DWR+ D Sbjct: 183 PGDPRDTTSPAAMASTLQTLFLNSPLSRASRQQLTAWFLANETGDAKLRAGLPQDWRIGD 242 Query: 240 KTGTGERGTYNDIGVFWPPGRKPIVVTVYLTGASAPMEKCNEVIANVARAVANA 293 +TG G G+ ND+ V WPPGR+P++VTVY+T A + N+ IA+V RAV A Sbjct: 243 RTGGGAYGSTNDVAVIWPPGREPLIVTVYITETEAAFDDRNKAIADVGRAVGAA 296 >ref|YP_004106571.1| beta-lactamase [Rhodopseudomonas palustris DX-1] gb|ADU41838.1| Beta-lactamase [Rhodopseudomonas palustris DX-1] Length = 291 Score = 289 bits (739), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 151/283 (53%), Positives = 186/283 (65%), Gaps = 2/283 (0%) Query: 1 MLTRRTFGLRALGLAVSCTLPRQGAAAGPSEPAQQLQQEFARIELATSGRLGVAALDMET 60 M+ RRT A LA + R+ A A +EP + FA +E + GRLGV LD Sbjct: 1 MINRRTMVGAAACLAGVGMIGRRAATA--TEPGDAIAARFAELEARSGGRLGVCVLDSSN 58 Query: 61 GLRASRRGDERFPMCSTFKALASAAVLHRVDRGESSLDQQIRFEAKDILANSPVTKEHVA 120 G R DERFPMCSTFK LA+ VL RVDR + SLD+++ + D++ SP T+ V Sbjct: 59 GRMIGHRLDERFPMCSTFKVLAAGLVLARVDRKQESLDRRVSYTKSDLVTYSPATETRVE 118 Query: 121 SGMTLAELCEAAITRSDNTAGNMILREIGGPAGLTGFFHTIGDNVSRLDRWELALNEGVS 180 GMT+AELCEAAIT SDNTAGN++L GGPAGLT F ++GD +RLDR E LNE + Sbjct: 119 GGMTIAELCEAAITLSDNTAGNLLLGSFGGPAGLTAFARSLGDQTTRLDRIETELNEALP 178 Query: 181 GDPRDTTSPVAMLKNLQRVVLGDVLQTVSRQKLVDWMVANKTGDARLRAGVPRDWRVADK 240 GD RDTTSP + ++L+ + LGD L SR LV WM AN TG AR+RAGVP W VADK Sbjct: 179 GDARDTTSPRTIAQDLRALALGDALTPSSRALLVAWMKANTTGGARIRAGVPSGWIVADK 238 Query: 241 TGTGERGTYNDIGVFWPPGRKPIVVTVYLTGASAPMEKCNEVI 283 TGTGERGT NDI V WPP R P++VTVYLTGA+ ++ N +I Sbjct: 239 TGTGERGTANDIAVLWPPQRAPLIVTVYLTGATVSRDQQNRLI 281