BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0118.0001.p (487 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABZ09819.1| putative PQQ enzyme repeat protein [uncultured ma... 787 0.0 ref|YP_004677526.1| putative PQQ enzyme repeat protein [Hyphomic... 786 0.0 ref|YP_004685515.1| quinoprotein ethanol dehydrogenase ExaA [Cup... 705 0.0 ref|ZP_03270888.1| Alcohol dehydrogenase (acceptor) [Burkholderi... 704 0.0 ref|YP_003608990.1| PQQ-dependent enzyme-like protein [Burkholde... 699 0.0 >gb|ABZ09819.1| putative PQQ enzyme repeat protein [uncultured marine microorganism HF4000_APKG8K5] Length = 562 Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/488 (76%), Positives = 420/488 (86%), Gaps = 2/488 (0%) Query: 1 VKDLHVAWIFQTDVKESLETSPIVVDGVMFVTTSFSHVYALDAKTGQQLWHYAHKMGPIT 60 V +L AWIFQT+VKES ETSPIVV+GVM+VTTSF+HVYAL+A TG +LWHYAHKMG IT Sbjct: 74 VGNLRPAWIFQTEVKESQETSPIVVNGVMYVTTSFNHVYALNAATGGELWHYAHKMGAIT 133 Query: 61 VYCCGPNNRGVQVLGDRVYLATLDSKLMALNAKTGEVVWTTNIADPELGYSETMAPTVVK 120 YCCGPN+RGV V GD+V++ TLD+KL+ALNA TGEVVW T IADPELGYSETMAPT V+ Sbjct: 134 TYCCGPNSRGVAVYGDKVFIGTLDAKLVALNASTGEVVWETQIADPELGYSETMAPTAVE 193 Query: 121 DKVLIGTNGGEYGIRGFVRAYDAKTGKQLWNFHTIPENSVGVWATKDATGRDMHRNIQAE 180 K+LIGTNGGEYGIRGF++AYDA +GK LW FHTIPENSVGVWAT DATGRDM R+I AE Sbjct: 194 GKILIGTNGGEYGIRGFLKAYDANSGKLLWTFHTIPENSVGVWATHDATGRDMLRDIAAE 253 Query: 181 KDMLAKIGDPYAKLGGGVWQNPSVDLATNRIYFVVGNPSPDLDGSNRPGDNLYTNSLVSL 240 K L K+GDPY LGGGVWQNP+VDL R+YF+ GNPSPDLDGS RPGDNLYTNSL+S+ Sbjct: 254 KKALKKLGDPYKTLGGGVWQNPAVDLERRRLYFMAGNPSPDLDGSIRPGDNLYTNSLISV 313 Query: 241 DLDTGKYVCHFQYIAHDVWDLDAVSPTVLKK--KXSGKTIPGVIHAGKTGHIYVHDRKDC 298 DLDTGKYVCHFQYIAHDVWDLDAVSP VL K GKTI GV+H GKTGHIYVHDR C Sbjct: 314 DLDTGKYVCHFQYIAHDVWDLDAVSPAVLVKVADKGGKTIDGVLHGGKTGHIYVHDRDTC 373 Query: 299 SLIRFSEAMVPQENMWVLPTKEGARMLPGANGGVEWSPIATDPGQELAYAINLHQPMTYH 358 LIRFSEAMVPQENMWVLPTK G RMLPGANGGVEWSP+A + L YAINLHQPMTYH Sbjct: 374 GLIRFSEAMVPQENMWVLPTKSGERMLPGANGGVEWSPLAANENLGLVYAINLHQPMTYH 433 Query: 359 VESSAYPNGKLWLGGAFKVIPGEKQAGNITAVNYNNGKIKWQVNTPEPMIGGILATAGGL 418 VES+ YP GKLWLGGAFK++PG +Q GNI+AV+YN GKI+W+V T +PMIGG+L+TAGGL Sbjct: 434 VESTPYPGGKLWLGGAFKIVPGAQQWGNISAVDYNTGKIRWKVKTQQPMIGGVLSTAGGL 493 Query: 419 VFTGEGNGKFAAYNSSNGKELWSFRAGAGVNAPPSSYMVGGKQYVVVGAGGNTQLDYKRG 478 VFTG+GNG FAAY++ G +LWSF+AGAGVNAPPSSY V G QY+VVG GGN QL++KRG Sbjct: 494 VFTGQGNGIFAAYDAETGSQLWSFQAGAGVNAPPSSYTVDGTQYIVVGVGGNVQLNFKRG 553 Query: 479 NNIIAFTL 486 NNIIAF++ Sbjct: 554 NNIIAFSV 561 >ref|YP_004677526.1| putative PQQ enzyme repeat protein [Hyphomicrobium sp. MC1] emb|CCB66960.1| putative PQQ enzyme repeat protein [Hyphomicrobium sp. MC1] Length = 572 Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/489 (75%), Positives = 417/489 (85%), Gaps = 2/489 (0%) Query: 1 VKDLHVAWIFQTDVKESLETSPIVVDGVMFVTTSFSHVYALDAKTGQQLWHYAHKMGPIT 60 V L AWIFQ DVKESLET+PI+V VM+VTTSF HVYAL+AKTG+Q WHY HKMGPIT Sbjct: 84 VAKLRPAWIFQMDVKESLETTPIIVGDVMYVTTSFDHVYALNAKTGEQYWHYKHKMGPIT 143 Query: 61 VYCCGPNNRGVQVLGDRVYLATLDSKLMALNAKTGEVVWTTNIADPELGYSETMAPTVVK 120 YCCGPNNRGV V D+VYLATLD+KL+AL+AKTG +VW T IADPE GYSETMAPT V Sbjct: 144 TYCCGPNNRGVAVYDDKVYLATLDAKLVALDAKTGSLVWETEIADPEDGYSETMAPTAVN 203 Query: 121 DKVLIGTNGGEYGIRGFVRAYDAKTGKQLWNFHTIPENSVGVWATKDATGRDMHRNIQAE 180 K++IGTNGGEYGIRGFVRAYDAKTGKQ+WNF T+PEN+VGVWATKDATG+D+HR+I+AE Sbjct: 204 GKIIIGTNGGEYGIRGFVRAYDAKTGKQVWNFDTVPENTVGVWATKDATGKDLHRDIEAE 263 Query: 181 KDMLAKIGDPYAKLGGGVWQNPSVDLATNRIYFVVGNPSPDLDGSNRPGDNLYTNSLVSL 240 K AK GDPY LGGGVWQNP+VDL NR++FVVGNPSPDLDGS RPGDNLYT+SLVS+ Sbjct: 264 KAQFAKTGDPYKTLGGGVWQNPAVDLKLNRLFFVVGNPSPDLDGSLRPGDNLYTDSLVSI 323 Query: 241 DLDTGKYVCHFQYIAHDVWDLDAVSPTVL--KKKXSGKTIPGVIHAGKTGHIYVHDRKDC 298 DLDTGKYVCH QYI HDVWD DAVSP +L K GK +PGVIH GKTG +YVH+RKDC Sbjct: 324 DLDTGKYVCHLQYIPHDVWDFDAVSPPILVDVKDKDGKVVPGVIHGGKTGFVYVHNRKDC 383 Query: 299 SLIRFSEAMVPQENMWVLPTKEGARMLPGANGGVEWSPIATDPGQELAYAINLHQPMTYH 358 SLIRFSE MV QENMW LPT GARMLPGANGGVEWSP+A +P L YA+NLHQPMTY Sbjct: 384 SLIRFSEPMVAQENMWTLPTPGGARMLPGANGGVEWSPMAVNPKLALTYAVNLHQPMTYQ 443 Query: 359 VESSAYPNGKLWLGGAFKVIPGEKQAGNITAVNYNNGKIKWQVNTPEPMIGGILATAGGL 418 V+SS YP+GKLWLGGAFKVIP E GN+TAVNYN GKIKWQV TPEPM+GG LATAG L Sbjct: 444 VQSSPYPDGKLWLGGAFKVIPTEASFGNVTAVNYNTGKIKWQVKTPEPMMGGALATAGDL 503 Query: 419 VFTGEGNGKFAAYNSSNGKELWSFRAGAGVNAPPSSYMVGGKQYVVVGAGGNTQLDYKRG 478 VFTGE NG F AYN+ +GK LWSF+ GAGVNAPP++Y + GK+Y+VVGAGGNTQ+D+KRG Sbjct: 504 VFTGEANGWFRAYNAESGKILWSFQCGAGVNAPPAAYSLDGKEYIVVGAGGNTQIDFKRG 563 Query: 479 NNIIAFTLD 487 NNIIAFTL+ Sbjct: 564 NNIIAFTLN 572 >ref|YP_004685515.1| quinoprotein ethanol dehydrogenase ExaA [Cupriavidus necator N-1] gb|AEI77034.1| quinoprotein ethanol dehydrogenase ExaA [Cupriavidus necator N-1] Length = 576 Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/490 (68%), Positives = 396/490 (80%), Gaps = 4/490 (0%) Query: 1 VKDLHVAWIFQTDVKESLETSPIVVDGVMFVTTSFSHVYALDAKTGQQLWHYAHKMGPIT 60 V L A+IFQT V ES+ET+PIVV+GVMF+TTS++HVYA+DA TG++ WHY HKMGP+T Sbjct: 86 VARLRPAFIFQTAVMESMETAPIVVNGVMFLTTSYNHVYAIDAVTGKEFWHYKHKMGPVT 145 Query: 61 VYCCGPNNRGVQVLGDRVYLATLDSKLMALNAKTGEVVWTTNIADPELGYSETMAPTVVK 120 +CCGPNNRGV + GDR+Y+ TLD+KL+AL+A+TG+++W T IADPELGYSETMAP VV Sbjct: 146 TFCCGPNNRGVAISGDRLYMGTLDAKLVALDARTGKLLWETQIADPELGYSETMAPVVVD 205 Query: 121 DKVLIGTNGGEYGIRGFVRAYDAKTGKQLWNFHTIPENS-VGVWATKDATGRDMHRNIQA 179 DKVLIGTNGGEYGIRGFV+A+ GK LW FHTIPE GVWATKDATGRDM R+I A Sbjct: 206 DKVLIGTNGGEYGIRGFVKAFSTTDGKLLWTFHTIPEKGHEGVWATKDATGRDMKRDIAA 265 Query: 180 EKDMLA-KIGDPYAKLGGGVWQNPSVDLATNRIYFVVGNPSPDLDGSNRPGDNLYTNSLV 238 EK MLA K GD Y LGGGVW P+VD A FVVGNPSPDL G+ RPGDNLYT+SLV Sbjct: 266 EKKMLADKGGDFYKTLGGGVWMAPAVDRANKLAIFVVGNPSPDLYGAIRPGDNLYTDSLV 325 Query: 239 SLDLDTGKYVCHFQYIAHDVWDLDAVSPTVLK--KKXSGKTIPGVIHAGKTGHIYVHDRK 296 ++DL+TG Y H QYIAHDVWDLDA SP +L + G+ IPGVIH GKTGH+YVHDR+ Sbjct: 326 AVDLNTGAYKWHSQYIAHDVWDLDAASPPILVDVRDEKGQMIPGVIHGGKTGHVYVHDRR 385 Query: 297 DCSLIRFSEAMVPQENMWVLPTKEGARMLPGANGGVEWSPIATDPGQELAYAINLHQPMT 356 D LIRFS+AM+PQENMW LPT +GARMLPGANGGVEWSP+A +P LAYA NLHQPMT Sbjct: 386 DGRLIRFSQAMIPQENMWTLPTPQGARMLPGANGGVEWSPMAFNPKMRLAYAANLHQPMT 445 Query: 357 YHVESSAYPNGKLWLGGAFKVIPGEKQAGNITAVNYNNGKIKWQVNTPEPMIGGILATAG 416 Y VE YP GKLWLGGAFKVIP E+Q G ++AVN ++GK+ W T +P+IGG+LATAG Sbjct: 446 YQVEDVPYPGGKLWLGGAFKVIPSEQQWGKLSAVNIDSGKVAWDYKTEQPLIGGVLATAG 505 Query: 417 GLVFTGEGNGKFAAYNSSNGKELWSFRAGAGVNAPPSSYMVGGKQYVVVGAGGNTQLDYK 476 GLVFTGEGNG F A++++NGK LW F+ GAGVN+PP SY VGGKQY+ V AGGNTQLD+K Sbjct: 506 GLVFTGEGNGLFKAFDAANGKMLWQFQCGAGVNSPPVSYTVGGKQYIAVAAGGNTQLDFK 565 Query: 477 RGNNIIAFTL 486 RGN+I F + Sbjct: 566 RGNSIFVFAV 575 >ref|ZP_03270888.1| Alcohol dehydrogenase (acceptor) [Burkholderia sp. H160] gb|EDZ97527.1| Alcohol dehydrogenase (acceptor) [Burkholderia sp. H160] Length = 577 Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/491 (68%), Positives = 398/491 (81%), Gaps = 5/491 (1%) Query: 1 VKDLHVAWIFQTDVKESLETSPIVVDGVMFVTTSFSHVYALDAKTGQQLWHYAHKMGPIT 60 V L A+IFQT V ES+ET+PIV DGVMF+TTSF+HVYA+DA TG++ WHY HKMGP+T Sbjct: 86 VAKLRPAFIFQTAVNESMETAPIVKDGVMFLTTSFNHVYAIDATTGKEFWHYKHKMGPVT 145 Query: 61 VYCCGPNNRGVQVLGDRVYLATLDSKLMALNAKTGEVVWTTNIADPELGYSETMAPTVVK 120 +CCGPNNRGV + GDR+Y+ TLDSKL+AL+AKTG V+W + IA+P+ GYSETMAP VV Sbjct: 146 TFCCGPNNRGVAISGDRLYMGTLDSKLVALDAKTGNVLWQSQIANPDEGYSETMAPAVVD 205 Query: 121 DKVLIGTNGGEYGIRGFVRAYDAKTGKQLWNFHTIPEN-SVGVWATKDATGRDMHRNIQA 179 KVLIGTNGGEYGIRGFV+AYDA +G+ LW F+TIP++ GVWATKDATGRD R+I A Sbjct: 206 GKVLIGTNGGEYGIRGFVKAYDANSGQLLWTFYTIPDSGQEGVWATKDATGRDEKRDIAA 265 Query: 180 EKDMLA-KIGDPYAKLGGGVWQNPSVDLATNRIYFVVGNPSPDLDGSNRPGDNLYTNSLV 238 EK LA K GD Y LGGGVW P++D TN +YFVVGNPSPDL G+ RPGDNLYT+SLV Sbjct: 266 EKKQLADKGGDFYKTLGGGVWMTPAIDRKTNTVYFVVGNPSPDLYGAVRPGDNLYTDSLV 325 Query: 239 SLDLDTGKYVCHFQYIAHDVWDLDAVSPTVL--KKKXSGKTIPGVIHAGKTGHIYVHDRK 296 ++DLDTGKY H+QY+ HDVWDLDA SP VL + GK IPG++HAGKTGH+YVHDR Sbjct: 326 AIDLDTGKYKWHYQYVPHDVWDLDAASPPVLIDVRDNDGKMIPGIVHAGKTGHVYVHDRA 385 Query: 297 DCSLIRFSEAMVPQENMWVLPTKEGARMLPGANGGVEWSPIATDPGQELAYAINLHQPMT 356 LIRFS+AM+PQENMW LPT GARMLPGANGGVEWSPIA DP L YA NLHQPMT Sbjct: 386 TGRLIRFSQAMIPQENMWTLPTAAGARMLPGANGGVEWSPIAFDPQTRLVYAANLHQPMT 445 Query: 357 YHVESSAYPNG-KLWLGGAFKVIPGEKQAGNITAVNYNNGKIKWQVNTPEPMIGGILATA 415 Y VE +AYP G KLWLGGAFKVIPGE+Q G ++AVN + GK+ W T +P++GG+LATA Sbjct: 446 YQVEEAAYPGGSKLWLGGAFKVIPGEQQWGKLSAVNVDTGKVAWDYKTDQPLMGGVLATA 505 Query: 416 GGLVFTGEGNGKFAAYNSSNGKELWSFRAGAGVNAPPSSYMVGGKQYVVVGAGGNTQLDY 475 GGLVF GEGNG F A++++NGK+LW F+AGAGVNAP SYMV GKQY+ V AGGNTQLD+ Sbjct: 506 GGLVFNGEGNGLFRAFDAANGKKLWEFQAGAGVNAPAVSYMVNGKQYIAVAAGGNTQLDF 565 Query: 476 KRGNNIIAFTL 486 KRGN+++ F + Sbjct: 566 KRGNSVVVFAV 576 >ref|YP_003608990.1| PQQ-dependent enzyme-like protein [Burkholderia sp. CCGE1002] gb|ADG19479.1| PQQ-dependent enzyme-like protein [Burkholderia sp. CCGE1002] Length = 577 Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/491 (68%), Positives = 393/491 (80%), Gaps = 5/491 (1%) Query: 1 VKDLHVAWIFQTDVKESLETSPIVVDGVMFVTTSFSHVYALDAKTGQQLWHYAHKMGPIT 60 V L +IFQT V ES+ET+PIV DGVMF+TTSF+HVYA+DA TG++ WHY HKMGP+T Sbjct: 86 VAKLKPVFIFQTAVNESMETAPIVKDGVMFLTTSFNHVYAVDATTGKEYWHYKHKMGPVT 145 Query: 61 VYCCGPNNRGVQVLGDRVYLATLDSKLMALNAKTGEVVWTTNIADPELGYSETMAPTVVK 120 +CCGPNNRGV + GDR+Y+ TLDSKL+AL+AKTG V+W T IADP+ GYSETMAP VV Sbjct: 146 TFCCGPNNRGVAISGDRLYMGTLDSKLVALDAKTGNVLWQTQIADPDQGYSETMAPAVVD 205 Query: 121 DKVLIGTNGGEYGIRGFVRAYDAKTGKQLWNFHTIPEN-SVGVWATKDATGRDMHRNIQA 179 KVLIGTNGGEYGIRGFV+AYDA +G+ LW F+TIPE GVWATKDATGRD R+I A Sbjct: 206 GKVLIGTNGGEYGIRGFVKAYDANSGQLLWTFYTIPETGQEGVWATKDATGRDEKRDIDA 265 Query: 180 EKDMLA-KIGDPYAKLGGGVWQNPSVDLATNRIYFVVGNPSPDLDGSNRPGDNLYTNSLV 238 EK LA K GD Y LGGGVW P++D TN +YF+VGNPSPDL G+ RPGDNLYT+SLV Sbjct: 266 EKKQLADKGGDFYKTLGGGVWMTPAIDRKTNTVYFMVGNPSPDLYGAIRPGDNLYTDSLV 325 Query: 239 SLDLDTGKYVCHFQYIAHDVWDLDAVSPTVL--KKKXSGKTIPGVIHAGKTGHIYVHDRK 296 ++DLDTGKY H+QY+ HDVWDLDAVSP VL + GK IPG++HAGKTGH+YVHDR Sbjct: 326 AIDLDTGKYKWHYQYVPHDVWDLDAVSPPVLIDVRDNDGKMIPGIVHAGKTGHVYVHDRA 385 Query: 297 DCSLIRFSEAMVPQENMWVLPTKEGARMLPGANGGVEWSPIATDPGQELAYAINLHQPMT 356 LIRFS+AM+PQENMW LPT GARMLPGANGGVEWSPIA DP L YA NLHQPMT Sbjct: 386 TGRLIRFSQAMIPQENMWTLPTAAGARMLPGANGGVEWSPIAFDPQTRLVYAANLHQPMT 445 Query: 357 YHVESSAYPNG-KLWLGGAFKVIPGEKQAGNITAVNYNNGKIKWQVNTPEPMIGGILATA 415 Y VE +AYP G KLWLGGAFKVIP E Q G ++AVN + GK+ W T +P+IGG+LATA Sbjct: 446 YQVEDAAYPGGSKLWLGGAFKVIPSEAQWGKLSAVNVDTGKVAWDYKTDQPLIGGVLATA 505 Query: 416 GGLVFTGEGNGKFAAYNSSNGKELWSFRAGAGVNAPPSSYMVGGKQYVVVGAGGNTQLDY 475 GGLVF GEGNG F A++++NGK+LW F+ GAGVNAP SY V GKQYV V AGGNTQLD+ Sbjct: 506 GGLVFNGEGNGLFRAFDAANGKKLWEFQCGAGVNAPAVSYTVNGKQYVAVAAGGNTQLDF 565 Query: 476 KRGNNIIAFTL 486 KRGN++I F + Sbjct: 566 KRGNSVIVFAV 576