BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0117.0074.p (255 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774086.1| hypothetical protein blr7446 [Bradyrhizobium ja... 408 e-112 ref|YP_001207871.1| hypothetical protein BRADO6002 [Bradyrhizobi... 400 e-110 ref|YP_487769.1| hypothetical protein RPB_4166 [Rhodopseudomonas... 383 e-104 ref|YP_001237877.1| hypothetical protein BBta_1763 [Bradyrhizobi... 382 e-104 ref|NP_949696.1| hypothetical protein RPA4360 [Rhodopseudomonas ... 380 e-104 >ref|NP_774086.1| hypothetical protein blr7446 [Bradyrhizobium japonicum USDA 110] dbj|BAC52711.1| blr7446 [Bradyrhizobium japonicum USDA 110] Length = 255 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 197/254 (77%), Positives = 222/254 (87%) Query: 1 MTLGSPLLSAIPGLRHAFFSREGGVSEGIYAALNGGLGSRDDPAKVAENRRRMAEQLGVP 60 MTL S LLSA+PGLRH+FF+REGGVS GIY+ALNGGLGS DD A VAENRRRMAE +GV Sbjct: 1 MTLASSLLSAVPGLRHSFFTREGGVSGGIYSALNGGLGSNDDQALVAENRRRMAEHVGVA 60 Query: 61 LDHLVSVHQVHSPDVVVVTGPWNGAARPKADALVTRSEGLAISVTTADCGPILFVDPNAR 120 + +S+HQ+HSPDV++ PW RPK DALVTR+ G+A+ V+TADCGP+LFVDPNAR Sbjct: 61 PERFLSLHQIHSPDVLIAETPWPSGPRPKGDALVTRTPGIALGVSTADCGPVLFVDPNAR 120 Query: 121 VIGAAHAGWKGALTGVLESTIDAMEKLGAERGGIVAAIGPLIRKESYEVGNEFVERFIEA 180 VIG AHAGWKGALTGVLESTI AMEKLGA RGGI+AAIGPLIR+ESYEVGNEFV RFIEA Sbjct: 121 VIGGAHAGWKGALTGVLESTILAMEKLGATRGGIIAAIGPLIRQESYEVGNEFVARFIEA 180 Query: 181 DAENGMFFMPAERDGHAMFDLAGFIRMRLENAGVLMIDDLGIDTYSDERCFSYRRSVHRK 240 DA+N MFF+P+ R+GHAMFDLAGFIR RLE AG+LMIDDLG+DTY+DER FSYRRSVHRK Sbjct: 181 DADNAMFFIPSVREGHAMFDLAGFIRTRLEAAGILMIDDLGLDTYADERFFSYRRSVHRK 240 Query: 241 EADYGRLVHAIALE 254 E DYGR VHAIALE Sbjct: 241 EPDYGRHVHAIALE 254 >ref|YP_001207871.1| hypothetical protein BRADO6002 [Bradyrhizobium sp. ORS 278] emb|CAL79656.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 248 Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/247 (79%), Positives = 215/247 (87%) Query: 8 LSAIPGLRHAFFSREGGVSEGIYAALNGGLGSRDDPAKVAENRRRMAEQLGVPLDHLVSV 67 +SAIPGLRHAFF+REGGVSEGIYA LNGGLGS D P V ENRRRMA QLGV +H +SV Sbjct: 1 MSAIPGLRHAFFTREGGVSEGIYAGLNGGLGSNDVPDSVRENRRRMAAQLGVAPEHFLSV 60 Query: 68 HQVHSPDVVVVTGPWNGAARPKADALVTRSEGLAISVTTADCGPILFVDPNARVIGAAHA 127 HQ+HSPDVVV TGPW+GAARPKADALVT + LAI VTTADCGPILFVDP RVIGAAHA Sbjct: 61 HQIHSPDVVVATGPWDGAARPKADALVTATPNLAIGVTTADCGPILFVDPERRVIGAAHA 120 Query: 128 GWKGALTGVLESTIDAMEKLGAERGGIVAAIGPLIRKESYEVGNEFVERFIEADAENGMF 187 GWKGALTGVLEST+ AME+LGAERG I+AAIGPLIR+ SYEVG EFV RFI+ DAE+ F Sbjct: 121 GWKGALTGVLESTLQAMEELGAERGRIIAAIGPLIRQPSYEVGAEFVTRFIDDDAEHARF 180 Query: 188 FMPAERDGHAMFDLAGFIRMRLENAGVLMIDDLGIDTYSDERCFSYRRSVHRKEADYGRL 247 F+P+ R+GHAMFDL GFIRMRLE AG+L+IDDLG+DTYSDER FSYRRSVHRKE DYGR Sbjct: 181 FLPSTREGHAMFDLGGFIRMRLETAGILLIDDLGLDTYSDERFFSYRRSVHRKEPDYGRH 240 Query: 248 VHAIALE 254 VHAI LE Sbjct: 241 VHAIMLE 247 >ref|YP_487769.1| hypothetical protein RPB_4166 [Rhodopseudomonas palustris HaA2] gb|ABD08858.1| Protein of unknown function DUF152 [Rhodopseudomonas palustris HaA2] Length = 267 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 183/254 (72%), Positives = 209/254 (82%) Query: 1 MTLGSPLLSAIPGLRHAFFSREGGVSEGIYAALNGGLGSRDDPAKVAENRRRMAEQLGVP 60 MT+ S L+A+PGLRHAFFSR GGVS+GIYA LNGG+GS DDPA VAENRRRMA+ +GVP Sbjct: 1 MTIASQRLAAVPGLRHAFFSRAGGVSQGIYAGLNGGIGSNDDPAHVAENRRRMAQTMGVP 60 Query: 61 LDHLVSVHQVHSPDVVVVTGPWNGAARPKADALVTRSEGLAISVTTADCGPILFVDPNAR 120 + ++V+QVHSPDV V PW+ AARPKADA+VT + GLA+ VT ADCGP+LF DP AR Sbjct: 61 PERFLTVYQVHSPDVAVAQAPWDNAARPKADAMVTATPGLALGVTAADCGPVLFADPTAR 120 Query: 121 VIGAAHAGWKGALTGVLESTIDAMEKLGAERGGIVAAIGPLIRKESYEVGNEFVERFIEA 180 VIGAAHAGWKGALTGVLE+T+D+ME LGA RG ++AAIGPLIR+ SYEVG+EFV RF A Sbjct: 121 VIGAAHAGWKGALTGVLEATLDSMEGLGAARGRVIAAIGPLIRQPSYEVGDEFVARFAAA 180 Query: 181 DAENGMFFMPAERDGHAMFDLAGFIRMRLENAGVLMIDDLGIDTYSDERCFSYRRSVHRK 240 DA+ FF+PA R GHAMFDL GFIRMRLENAGV IDD GIDTY DE FSYRRSVHR Sbjct: 181 DADYVRFFIPAARPGHAMFDLGGFIRMRLENAGVAAIDDTGIDTYPDENFFSYRRSVHRS 240 Query: 241 EADYGRLVHAIALE 254 E DYGR +HAI LE Sbjct: 241 EPDYGRQIHAIVLE 254 >ref|YP_001237877.1| hypothetical protein BBta_1763 [Bradyrhizobium sp. BTAi1] gb|ABQ33971.1| hypothetical protein BBta_1763 [Bradyrhizobium sp. BTAi1] Length = 242 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 183/241 (75%), Positives = 209/241 (86%) Query: 14 LRHAFFSREGGVSEGIYAALNGGLGSRDDPAKVAENRRRMAEQLGVPLDHLVSVHQVHSP 73 +RHAFF+REGGVS+GIYA LNGGLGS D P V ENRRRMAE+LGV D L+S+HQVHSP Sbjct: 1 MRHAFFTREGGVSDGIYAGLNGGLGSNDSPDSVRENRRRMAERLGVAPDQLLSLHQVHSP 60 Query: 74 DVVVVTGPWNGAARPKADALVTRSEGLAISVTTADCGPILFVDPNARVIGAAHAGWKGAL 133 DVV+ TGPW+G RPKADALVT + LAI VTTADCGPILF DP RV+GAAHAGWKGAL Sbjct: 61 DVVIATGPWDGPVRPKADALVTATPNLAIGVTTADCGPILFADPEKRVVGAAHAGWKGAL 120 Query: 134 TGVLESTIDAMEKLGAERGGIVAAIGPLIRKESYEVGNEFVERFIEADAENGMFFMPAER 193 TGVLE+T+ AME+LGAERG I+AAIGPLIR++SYEVG EFV RFI+ DAE+ FF+P++R Sbjct: 121 TGVLEATLQAMEELGAERGRIIAAIGPLIRQQSYEVGAEFVARFIDDDAEHARFFLPSQR 180 Query: 194 DGHAMFDLAGFIRMRLENAGVLMIDDLGIDTYSDERCFSYRRSVHRKEADYGRLVHAIAL 253 GHAMFDL GFIRMRLE+AGVL+IDDLG+DTY+DER FSYRRSVHRKE DYGR VHAI + Sbjct: 181 KGHAMFDLGGFIRMRLESAGVLLIDDLGLDTYADERFFSYRRSVHRKEPDYGRHVHAIMI 240 Query: 254 E 254 E Sbjct: 241 E 241 >ref|NP_949696.1| hypothetical protein RPA4360 [Rhodopseudomonas palustris CGA009] emb|CAE29801.1| DUF152 [Rhodopseudomonas palustris CGA009] Length = 257 Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust. Identities = 187/254 (73%), Positives = 207/254 (81%) Query: 1 MTLGSPLLSAIPGLRHAFFSREGGVSEGIYAALNGGLGSRDDPAKVAENRRRMAEQLGVP 60 M + SPLL A PGLRHAFF+REGGVS+GIYA LNGG+GS DDPAKVAENRRRMAE LGV Sbjct: 1 MIITSPLLGAAPGLRHAFFTREGGVSDGIYAGLNGGIGSNDDPAKVAENRRRMAEALGVA 60 Query: 61 LDHLVSVHQVHSPDVVVVTGPWNGAARPKADALVTRSEGLAISVTTADCGPILFVDPNAR 120 + ++V+QVHSPDV V PW+ A+RPKADA+VTR+ GLAI VTTADCGPILF DP A+ Sbjct: 61 PERFLTVYQVHSPDVAVAEAPWDQASRPKADAIVTRTPGLAIGVTTADCGPILFADPAAQ 120 Query: 121 VIGAAHAGWKGALTGVLESTIDAMEKLGAERGGIVAAIGPLIRKESYEVGNEFVERFIEA 180 VIGAAHAGWKGALTGVLEST+ MEKLGA+R +VAAIGPLIR+ SYEVG+EFV RF Sbjct: 121 VIGAAHAGWKGALTGVLESTLQEMEKLGAQRDRVVAAIGPLIRQPSYEVGDEFVARFTAT 180 Query: 181 DAENGMFFMPAERDGHAMFDLAGFIRMRLENAGVLMIDDLGIDTYSDERCFSYRRSVHRK 240 D FF AER GHAMFDL GFIRMRLE AGV MIDDLGIDTY DER FSYRR+ HR Sbjct: 181 DPAYAAFFTAAERPGHAMFDLGGFIRMRLEAAGVGMIDDLGIDTYPDERFFSYRRTTHRS 240 Query: 241 EADYGRLVHAIALE 254 E DYGR VHAI L+ Sbjct: 241 EPDYGRHVHAIVLD 254