BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0117.0072.p (202 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774087.1| hypothetical protein blr7447 [Bradyrhizobium ja... 243 1e-62 ref|YP_001237876.1| hypothetical protein BBta_1762 [Bradyrhizobi... 231 4e-59 ref|YP_780362.1| hypothetical protein RPE_1431 [Rhodopseudomonas... 215 4e-54 ref|YP_531291.1| hypothetical protein RPC_1410 [Rhodopseudomonas... 212 3e-53 ref|YP_487770.1| hypothetical protein RPB_4167 [Rhodopseudomonas... 205 2e-51 >ref|NP_774087.1| hypothetical protein blr7447 [Bradyrhizobium japonicum USDA 110] dbj|BAC52712.1| blr7447 [Bradyrhizobium japonicum USDA 110] Length = 208 Score = 243 bits (620), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 152/210 (72%), Positives = 167/210 (79%), Gaps = 14/210 (6%) Query: 1 MREASNRQFQTGTAARAAIAGTWLAIACALGGCAAGGNVADSYAMATPASSGATVAFESI 60 MR+AS F G A +A LA A ALGGCA GG A+SYAMA A SGATVAFESI Sbjct: 1 MRDAS---FILGRAGSRVLAVMLLAAATALGGCAGGGGAANSYAMAPSAGSGATVAFESI 57 Query: 61 DGPPPQVFDRMVGVLDSESKLRSLSIVSRQGAAAYRVRSYLSAQVVRGRTMISWVWDVYD 120 DGPPPQVFDRMVGVLDSESKLRSLS+VSR+G AAYRVRSYLSAQ+VRGRT+I+WVWDVYD Sbjct: 58 DGPPPQVFDRMVGVLDSESKLRSLSVVSREGTAAYRVRSYLSAQIVRGRTVIAWVWDVYD 117 Query: 121 SNQQRALRLSGEEP-AGKAGRDA----WAAADDLVLRKIAQAGFSGLSSMLNGGP-ADSP 174 +NQQRALRLSGEEP + K GRDA W+AADDLVLRKIAQAGFSGLS+M+NG P A S Sbjct: 118 ANQQRALRLSGEEPTSAKGGRDATRDPWSAADDLVLRKIAQAGFSGLSNMINGTPEAPSA 177 Query: 175 APDLRGPTVAS----APAPAAPETVALGYS 200 AP LRGP VAS APAP P + ALGY+ Sbjct: 178 APGLRGPAVASVTPEAPAPEMPAS-ALGYA 206 >ref|YP_001237876.1| hypothetical protein BBta_1762 [Bradyrhizobium sp. BTAi1] gb|ABQ33970.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 188 Score = 231 bits (590), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 122/183 (66%), Positives = 143/183 (78%), Gaps = 10/183 (5%) Query: 27 ACALGGCAAGGNV--ADSYAMATPASSGATVAFESIDGPPPQVFDRMVGVLDSESKLRSL 84 A L GCA G A++YAMA P+S GAT+AFE IDGPPPQ+FDRMV VLDSESKLRSL Sbjct: 5 AATLAGCATSGTSGPANAYAMA-PSSDGATIAFEQIDGPPPQIFDRMVNVLDSESKLRSL 63 Query: 85 SIVSRQGAAAYRVRSYLSAQVVRGRTMISWVWDVYDSNQQRALRLSGEEPAGKAGRDAWA 144 +IVSR+ AAYRVR+YLSAQVV G+++I+WV+DVYD NQQRALRLSGEEP G+ GRD W Sbjct: 64 AIVSREAPAAYRVRTYLSAQVVSGKSVIAWVFDVYDRNQQRALRLSGEEPVGRGGRDPWN 123 Query: 145 AADDLVLRKIAQAGFSGLSSMLNG-GPADS----PAPDLRGPTVASA--PAPAAPETVAL 197 A DD+VLRKIAQAGFSGLS+MLNG PA++ PAP RGP VA+ P+ A AL Sbjct: 124 AVDDMVLRKIAQAGFSGLSNMLNGTAPAETAPAQPAPVTRGPAVATTEPPSTAGTSVAAL 183 Query: 198 GYS 200 GY+ Sbjct: 184 GYT 186 >ref|YP_780362.1| hypothetical protein RPE_1431 [Rhodopseudomonas palustris BisA53] gb|ABJ05382.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 205 Score = 215 bits (547), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 117/190 (61%), Positives = 138/190 (72%), Gaps = 2/190 (1%) Query: 13 TAARAAIAGTWLAIACALGGCAAGGNVADSYAMATPASSGATVAFESIDGPPPQVFDRMV 72 TA R A LA+ L GC + GN S A A ATVAFESIDGPPPQVFDRMV Sbjct: 11 TAPRLIRAAMLLALGGMLAGCVSNGNSGPSNAYAQMGGGAATVAFESIDGPPPQVFDRMV 70 Query: 73 GVLDSESKLRSLSIVSRQGAAAYRVRSYLSAQVVRGRTMISWVWDVYDSNQQRALRLSGE 132 +LDSESKLR++++VSRQ AAYRVRSYL+A V GRT I+WVWDVYD +QQRALRLSGE Sbjct: 71 NLLDSESKLRNVAVVSRQAPAAYRVRSYLAAHVRGGRTSIAWVWDVYDRDQQRALRLSGE 130 Query: 133 EPAGKAGRDAWAAADDLVLRKIAQAGFSGLSSMLNGGPAD-SPAPDLRGPTVASAPAPAA 191 E AGKAGRDAWA ADDL+LR+IAQAG +GLS+ LN D +P P RGP +A+A A Sbjct: 131 ETAGKAGRDAWAQADDLLLRRIAQAGLTGLSNALNAPTPDAAPGPPSRGPAIAAA-EDTA 189 Query: 192 PETVALGYSA 201 P T A+ +++ Sbjct: 190 PATPAMSFAS 199 >ref|YP_531291.1| hypothetical protein RPC_1410 [Rhodopseudomonas palustris BisB18] gb|ABD86972.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 209 Score = 212 bits (539), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 121/205 (59%), Positives = 146/205 (71%), Gaps = 12/205 (5%) Query: 8 QFQTGTA----ARAAIAGTWLAIACALGGCAAGG--NVADSYAMATPASSGATVAFESID 61 +FQ TA AR A + L + C LGGC + G N S A A G T+ FESID Sbjct: 2 RFQLPTANLTPARLARSALLLVMLCGLGGCVSDGASNGGPSAAYAQ-MGGGTTITFESID 60 Query: 62 GPPPQVFDRMVGVLDSESKLRSLSIVSRQGAAAYRVRSYLSAQVVRGRTMISWVWDVYDS 121 GPPPQVFDRMV +LDSESKLR++++VSR+ AAYRVRSYL+AQ+ GRT I+WVWDVYD Sbjct: 61 GPPPQVFDRMVTLLDSESKLRNVAVVSREAPAAYRVRSYLAAQIRGGRTTIAWVWDVYDR 120 Query: 122 NQQRALRLSGEEPAGKAGRDAWAAADDLVLRKIAQAGFSGLSSMLNGGPADS-PAPDL-- 178 +QQRALRLSGEEPAGK GRDAWA ADDLVLR+IAQAG SGLS ++N P +S PAP Sbjct: 121 DQQRALRLSGEEPAGKPGRDAWAQADDLVLRRIAQAGLSGLSGLINTAPGESQPAPAATP 180 Query: 179 -RGPTVASAPAPAAPETVALGYSAD 202 RGP +AS + + ALG++A+ Sbjct: 181 DRGPAIASV-EDVSTGSNALGFAAE 204 >ref|YP_487770.1| hypothetical protein RPB_4167 [Rhodopseudomonas palustris HaA2] gb|ABD08859.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 198 Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 115/175 (65%), Positives = 131/175 (74%), Gaps = 6/175 (3%) Query: 30 LGGCAAGGNVADSYAMATPASSGATVAFESIDGPPPQVFDRMVGVLDSESKLRSLSIVSR 89 + GC G S MA+ AS G+TVAFESIDGPPP VFDRMV VLDSESKLR++ IVSR Sbjct: 26 VSGCVTEG--GGSGPMAS-ASGGSTVAFESIDGPPPPVFDRMVSVLDSESKLRNIPIVSR 82 Query: 90 QGAAAYRVRSYLSAQVVRGRTMISWVWDVYDSNQQRALRLSGEEPAGKAGRDAWAAADDL 149 +G AAYRVRSYLSAQV RT I+WVWDVYD NQQRALRLSGEE G+ GRDAW ADD Sbjct: 83 EGGAAYRVRSYLSAQVRGNRTNIAWVWDVYDRNQQRALRLSGEEATGRPGRDAWDQADDT 142 Query: 150 VLRKIAQAGFSGLSSMLNGG-PADSP--APDLRGPTVASAPAPAAPETVALGYSA 201 VLR+IAQAGF+GLS ++NG PADS AP RGP +A APA P +L ++A Sbjct: 143 VLRRIAQAGFTGLSGLVNGTLPADSAPRAPAARGPAIADAPASDEPPASSLSFAA 197