BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0117.0053.p         (158 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774105.1| hypothetical protein blr7465 [Bradyrhizobium ja...   228   2e-58
ref|ZP_08627184.1| hypothetical protein CSIRO_0241 [Bradyrhizobi...   213   6e-54
ref|YP_531282.1| hypothetical protein RPC_1401 [Rhodopseudomonas...   207   4e-52
ref|YP_001207918.1| putative signal peptide [Bradyrhizobium sp. ...   202   1e-50
ref|YP_001237848.1| hypothetical protein BBta_1733 [Bradyrhizobi...   202   2e-50

>ref|NP_774105.1| hypothetical protein blr7465 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52730.1| blr7465 [Bradyrhizobium japonicum USDA 110]
          Length = 190

 Score =  228 bits (582), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 104/137 (75%), Positives = 119/137 (86%), Gaps = 1/137 (0%)

Query: 21  LVVGTLAFGGTAQAANPLEMNFWLSGPRYDGNVAPCEKALTVISTQFQEKEATFWNSPLV 80
           L+ G L+ G  A+AANPLE+NFWLSGPRYDGNVA C+KAL  I+TQF EKE+ FWNS L 
Sbjct: 54  LMFGALSLG-EARAANPLELNFWLSGPRYDGNVADCDKALPTIATQFWEKESAFWNSSLK 112

Query: 81  ITGFNGIHETAFRPWQSDNIPRRYCSGEAMLSDGKVRKVHYSIIEDGGFASINQGVEWCV 140
           ITGF+ +HETAFRPWQSDNIPRRYC+GEAML+DGKVRKVH+SIIEDGGFA    GVEWCV
Sbjct: 113 ITGFSAVHETAFRPWQSDNIPRRYCTGEAMLNDGKVRKVHFSIIEDGGFAGYGNGVEWCV 172

Query: 141 AGLDRNWAYNPSCKAAR 157
            GLDRNWAYNP+C+AA+
Sbjct: 173 VGLDRNWAYNPACRAAK 189


>ref|ZP_08627184.1| hypothetical protein CSIRO_0241 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP10124.1| hypothetical protein CSIRO_0241 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 156

 Score =  213 bits (543), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 104/158 (65%), Positives = 122/158 (77%), Gaps = 2/158 (1%)

Query: 1   MRNLFSSRNKLGRKLGLGAALVVGTLAFGGTAQAANPLEMNFWLSGPRYDGNVAPCEKAL 60
           MR+LFS+  KL   + LGA  V G +A    AQAAN LE NFWLSGPRYDG++ PC +AL
Sbjct: 1   MRDLFSTFRKLTLAVALGA--VAGLMALAPAAQAANVLERNFWLSGPRYDGDMRPCSEAL 58

Query: 61  TVISTQFQEKEATFWNSPLVITGFNGIHETAFRPWQSDNIPRRYCSGEAMLSDGKVRKVH 120
             I  QF EKE+ FWNS L ITGF  +HETAFRPW S++IPRR+C+  AML+DG+ R+VH
Sbjct: 59  GTIVQQFAEKESKFWNSALEITGFADVHETAFRPWASNSIPRRFCTASAMLNDGRARQVH 118

Query: 121 YSIIEDGGFASINQGVEWCVAGLDRNWAYNPSCKAARP 158
           YS+IEDGGFA  + GVEWCV GLDRNWAYNPSCKAARP
Sbjct: 119 YSVIEDGGFAGFDSGVEWCVVGLDRNWAYNPSCKAARP 156


>ref|YP_531282.1| hypothetical protein RPC_1401 [Rhodopseudomonas palustris BisB18]
 gb|ABD86963.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
          Length = 175

 Score =  207 bits (527), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 90/123 (73%), Positives = 107/123 (86%)

Query: 36  NPLEMNFWLSGPRYDGNVAPCEKALTVISTQFQEKEATFWNSPLVITGFNGIHETAFRPW 95
           NPLE+NFWLSGPRYDG++  CE  L+ I++QF EKE TFWNS LVITG+ G+HETAFRPW
Sbjct: 53  NPLELNFWLSGPRYDGDLPACEAGLSSITSQFAEKERTFWNSDLVITGYYGVHETAFRPW 112

Query: 96  QSDNIPRRYCSGEAMLSDGKVRKVHYSIIEDGGFASINQGVEWCVAGLDRNWAYNPSCKA 155
           QSDNIPRR+C+ +AMLSDGK R+VH+SIIEDGG AS   GVE+CV GLDRNWA+NP+CKA
Sbjct: 113 QSDNIPRRFCTADAMLSDGKPRQVHFSIIEDGGIASFGHGVEFCVVGLDRNWAFNPACKA 172

Query: 156 ARP 158
           A+P
Sbjct: 173 AKP 175


>ref|YP_001207918.1| putative signal peptide [Bradyrhizobium sp. ORS 278]
 emb|CAL79703.1| conserved hypothetical protein; putative signal peptide
           [Bradyrhizobium sp. ORS 278]
          Length = 154

 Score =  202 bits (514), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 92/144 (63%), Positives = 113/144 (78%)

Query: 15  LGLGAALVVGTLAFGGTAQAANPLEMNFWLSGPRYDGNVAPCEKALTVISTQFQEKEATF 74
           LG G   ++  L     A AANPLEMNFWLSGP+Y+G VAPCE A+  I ++FQ+KE+TF
Sbjct: 11  LGAGCGALLAALVATAPAHAANPLEMNFWLSGPKYEGRVAPCEAAIPTIVSRFQDKESTF 70

Query: 75  WNSPLVITGFNGIHETAFRPWQSDNIPRRYCSGEAMLSDGKVRKVHYSIIEDGGFASINQ 134
           WNS L ITG   + E AFRPWQSDNIPRR+C+G  M+SDGK R ++YSIIEDGGFA  +Q
Sbjct: 71  WNSSLTITGVANVREIAFRPWQSDNIPRRFCTGSVMISDGKARTLNYSIIEDGGFAGYDQ 130

Query: 135 GVEWCVAGLDRNWAYNPSCKAARP 158
           GVE+CV GLDRNWA+NP+C+AA+P
Sbjct: 131 GVEFCVVGLDRNWAFNPACRAAKP 154


>ref|YP_001237848.1| hypothetical protein BBta_1733 [Bradyrhizobium sp. BTAi1]
 gb|ABQ33942.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 154

 Score =  202 bits (513), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 88/123 (71%), Positives = 105/123 (85%)

Query: 36  NPLEMNFWLSGPRYDGNVAPCEKALTVISTQFQEKEATFWNSPLVITGFNGIHETAFRPW 95
           NPLEMNFWLSGP+Y+G VAPCE A+  I ++FQEKE+TFWNS L ITG   + E AFRPW
Sbjct: 32  NPLEMNFWLSGPKYEGRVAPCEAAVPTIVSRFQEKESTFWNSTLTITGVANVREIAFRPW 91

Query: 96  QSDNIPRRYCSGEAMLSDGKVRKVHYSIIEDGGFASINQGVEWCVAGLDRNWAYNPSCKA 155
           QSDNIPRR+C+G  M+SDGKVR V+YSIIEDGGFA  +QGVE+CV GLDRNWA+NP+C+A
Sbjct: 92  QSDNIPRRFCTGSVMVSDGKVRTVNYSIIEDGGFAGYDQGVEFCVVGLDRNWAFNPACRA 151

Query: 156 ARP 158
           A+P
Sbjct: 152 AKP 154