BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0117.0050.p (286 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774107.1| hypothetical protein blr7467 [Bradyrhizobium ja... 471 e-131 ref|YP_530787.1| hypothetical protein RPC_0898 [Rhodopseudomonas... 462 e-128 ref|YP_001237846.1| hypothetical protein BBta_1731 [Bradyrhizobi... 454 e-125 ref|ZP_01047018.1| hypothetical protein NB311A_14530 [Nitrobacte... 452 e-125 ref|YP_578345.1| hypothetical protein Nham_3149 [Nitrobacter ham... 450 e-124 >ref|NP_774107.1| hypothetical protein blr7467 [Bradyrhizobium japonicum USDA 110] dbj|BAC52732.1| blr7467 [Bradyrhizobium japonicum USDA 110] Length = 286 Score = 471 bits (1212), Expect = e-131, Method: Compositional matrix adjust. Identities = 229/286 (80%), Positives = 248/286 (86%) Query: 1 MNYRHAFHAGSFADVIKHIVLVRMLTYLQDKPAPFRVIDTHAGAGLYDLTSSEAQRGGEW 60 MNYRHAFHAG+FADVIKHIVL R+LTYLQDKP FRVIDTHAGAGLYDL S EA+RGGEW Sbjct: 1 MNYRHAFHAGNFADVIKHIVLARILTYLQDKPGAFRVIDTHAGAGLYDLESDEARRGGEW 60 Query: 61 LTGIARLMQARLSDKALPLIAPYLDIVRAFNPKGELKAYPGSPLIARALLRPQDRITACE 120 LTGIARLMQARLS++ L PYLDIVRAFNPKGELKAYPGSPLIAR LLRPQDR+ ACE Sbjct: 61 LTGIARLMQARLSNETAALTKPYLDIVRAFNPKGELKAYPGSPLIARGLLRPQDRLVACE 120 Query: 121 IEPTARKQLIDALRRDAQARVVDLDGWMALPAFVPPNERRGLVLIDPPFEAKDEFERLAS 180 +EP ARK LID LRRD QARVVDLDGW+ALPAFVPP ERRGLVLIDPPFEAK+EFERL Sbjct: 121 LEPKARKALIDVLRRDEQARVVDLDGWVALPAFVPPKERRGLVLIDPPFEAKNEFERLGE 180 Query: 181 AFAEAFVKWPTGTYLLWYPVKTRRATDELARSVAAAAAASRPAGKCLRLEFSVAPQEAGA 240 AF+EAF KWPTG Y++WYP K+RRATD LA+ VA AAA++P GKCLRLEFS APQ GA Sbjct: 181 AFSEAFAKWPTGIYVIWYPAKSRRATDALAQLVARLAAAAKPPGKCLRLEFSAAPQLDGA 240 Query: 241 GLVSTGLLLVNPPWTLANELKIILPELEKPLGQGGAGRFRLETPKP 286 L STGLL+VNPP+TL ELK ILPELE PLGQGGA RFRLE P+P Sbjct: 241 ALTSTGLLIVNPPYTLHGELKTILPELEMPLGQGGAARFRLEVPRP 286 >ref|YP_530787.1| hypothetical protein RPC_0898 [Rhodopseudomonas palustris BisB18] gb|ABD86468.1| protein of unknown function DUF519 [Rhodopseudomonas palustris BisB18] Length = 286 Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust. Identities = 222/286 (77%), Positives = 247/286 (86%) Query: 1 MNYRHAFHAGSFADVIKHIVLVRMLTYLQDKPAPFRVIDTHAGAGLYDLTSSEAQRGGEW 60 MNYRHAFHAGSFADVIKH+VLVR+LTYLQ+KPAPFRVID+HAGAG+YDL EA R GEW Sbjct: 1 MNYRHAFHAGSFADVIKHLVLVRILTYLQEKPAPFRVIDSHAGAGVYDLAGDEASRSGEW 60 Query: 61 LTGIARLMQARLSDKALPLIAPYLDIVRAFNPKGELKAYPGSPLIARALLRPQDRITACE 120 LTGIAR+MQAR S+KA PL+APYLDIVRAFNP+ EL YPGSPLIARALLRPQD + ACE Sbjct: 61 LTGIARIMQARFSEKAAPLVAPYLDIVRAFNPQRELTTYPGSPLIARALLRPQDSLVACE 120 Query: 121 IEPTARKQLIDALRRDAQARVVDLDGWMALPAFVPPNERRGLVLIDPPFEAKDEFERLAS 180 +E TARK+LI AL RD QA+VVDLDGW+ LPAFVPP ERRGLVLIDPP+E KDEFE++A Sbjct: 121 VELTARKRLIKALHRDTQAKVVDLDGWVGLPAFVPPKERRGLVLIDPPYERKDEFEQVAD 180 Query: 181 AFAEAFVKWPTGTYLLWYPVKTRRATDELARSVAAAAAASRPAGKCLRLEFSVAPQEAGA 240 F+ AF KWP+G YL+WYPVK+RRATD LAR VA A+ + G CLRLEFS+APQ A A Sbjct: 181 GFSAAFAKWPSGCYLIWYPVKSRRATDALARHVAEVASQAPTPGSCLRLEFSIAPQSAEA 240 Query: 241 GLVSTGLLLVNPPWTLANELKIILPELEKPLGQGGAGRFRLETPKP 286 GLVSTGLL+VNPPWTLA ELKIILPELEKPLG GGAGRFRLE KP Sbjct: 241 GLVSTGLLIVNPPWTLAAELKIILPELEKPLGLGGAGRFRLEVAKP 286 >ref|YP_001237846.1| hypothetical protein BBta_1731 [Bradyrhizobium sp. BTAi1] gb|ABQ33940.1| hypothetical protein BBta_1731 [Bradyrhizobium sp. BTAi1] Length = 286 Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust. Identities = 222/285 (77%), Positives = 245/285 (85%) Query: 1 MNYRHAFHAGSFADVIKHIVLVRMLTYLQDKPAPFRVIDTHAGAGLYDLTSSEAQRGGEW 60 MNYRHAFHAG FADVIKHIVL R+L YLQ+KPA FRVIDTHAGAGLYDLT EA R GE+ Sbjct: 1 MNYRHAFHAGGFADVIKHIVLTRILVYLQEKPAAFRVIDTHAGAGLYDLTGDEATRSGEF 60 Query: 61 LTGIARLMQARLSDKALPLIAPYLDIVRAFNPKGELKAYPGSPLIARALLRPQDRITACE 120 LTGIARL+QARLS++A L+APYLDIVR+FNP GEL AYPGSPLIARALLRPQDR+T CE Sbjct: 61 LTGIARLLQARLSEQAYALVAPYLDIVRSFNPPGELVAYPGSPLIARALLRPQDRMTLCE 120 Query: 121 IEPTARKQLIDALRRDAQARVVDLDGWMALPAFVPPNERRGLVLIDPPFEAKDEFERLAS 180 + P RKQLIDALRRD QARVVDLDGW+ALPAFVPPNERRGLVLIDP FEAKDEFERLA Sbjct: 121 LAPVPRKQLIDALRRDTQARVVDLDGWVALPAFVPPNERRGLVLIDPAFEAKDEFERLAD 180 Query: 181 AFAEAFVKWPTGTYLLWYPVKTRRATDELARSVAAAAAASRPAGKCLRLEFSVAPQEAGA 240 FA AF KW TG Y+LWYP K+RRAT++LA VA AAA++P GK LR+EFSVAPQ G Sbjct: 181 RFATAFAKWTTGIYVLWYPAKSRRATEQLAERVAHLAAAAKPPGKVLRIEFSVAPQIEGE 240 Query: 241 GLVSTGLLLVNPPWTLANELKIILPELEKPLGQGGAGRFRLETPK 285 L STGLL+VNPPWTL +ELK+IL EL++PLGQGGA RFRLE PK Sbjct: 241 ALTSTGLLVVNPPWTLHDELKLILQELQRPLGQGGAARFRLEFPK 285 >ref|ZP_01047018.1| hypothetical protein NB311A_14530 [Nitrobacter sp. Nb-311A] gb|EAQ35120.1| hypothetical protein NB311A_14530 [Nitrobacter sp. Nb-311A] Length = 284 Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust. Identities = 225/283 (79%), Positives = 235/283 (83%), Gaps = 2/283 (0%) Query: 1 MNYRHAFHAGSFADVIKHIVLVRMLTYLQDKPAPFRVIDTHAGAGLYDLTSSEAQRGGEW 60 MNYRHAFHAGSFADVIKHIVLVR+LTYL +KPA FRVIDTHAGAG+YDLT EA RGGEW Sbjct: 1 MNYRHAFHAGSFADVIKHIVLVRILTYLHEKPAAFRVIDTHAGAGVYDLTGEEAGRGGEW 60 Query: 61 LTGIARLMQARLSDKALPLIAPYLDIVRAFNPKGELKAYPGSPLIARALLRPQDRITACE 120 LTGIARLMQAR SD PLIAPYLDIVRAFNP+ LK YPGSPLIARALLRPQDRI ACE Sbjct: 61 LTGIARLMQARFSDAVAPLIAPYLDIVRAFNPQRGLKCYPGSPLIARALLRPQDRIVACE 120 Query: 121 IEPTARKQLIDALRRDAQARVVDLDGWMALPAFVPPNERRGLVLIDPPFEAKDEFERLAS 180 IEP RK LIDALRRD+QA VVDLDGWMAL AFVPP ERRGLVLIDPPFE +DEFERLA Sbjct: 121 IEPVTRKHLIDALRRDSQANVVDLDGWMALAAFVPPKERRGLVLIDPPFEREDEFERLAG 180 Query: 181 AFAEAFVKWPTGTYLLWYPVKTRRATDELARSVAAAAAASRPAGKCLRLEFSVAPQEAGA 240 FA AF KWPTG YLLWYP K RRATD+LA + A A KCLRLEFSVAPQ A Sbjct: 181 GFAGAFAKWPTGCYLLWYPAKRRRATDDLAHRIGAVAGGE--TDKCLRLEFSVAPQTADG 238 Query: 241 GLVSTGLLLVNPPWTLANELKIILPELEKPLGQGGAGRFRLET 283 L S GLL+VNPPWTL ELK ILPELEKPLGQGGA RF+LET Sbjct: 239 PLTSAGLLIVNPPWTLRTELKSILPELEKPLGQGGAARFKLET 281 >ref|YP_578345.1| hypothetical protein Nham_3149 [Nitrobacter hamburgensis X14] gb|ABE63885.1| protein of unknown function DUF519 [Nitrobacter hamburgensis X14] Length = 285 Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust. Identities = 225/283 (79%), Positives = 241/283 (85%), Gaps = 3/283 (1%) Query: 1 MNYRHAFHAGSFADVIKHIVLVRMLTYLQDKPAPFRVIDTHAGAGLYDLTSSEAQRGGEW 60 MNYRHAFHAG+FADVIKHIVLVR+LTYL +K A FRVIDTHAGAG+YDLT EA RGGEW Sbjct: 1 MNYRHAFHAGNFADVIKHIVLVRILTYLHEKLAAFRVIDTHAGAGVYDLTGDEAGRGGEW 60 Query: 61 LTGIARLMQARLSDKALPLIAPYLDIVRAFNP-KGELKAYPGSPLIARALLRPQDRITAC 119 LTGIARLMQAR SD PL+APYLDIVRAFNP +G L++YPGSPLIARALLRPQDR+ AC Sbjct: 61 LTGIARLMQARFSDAVGPLVAPYLDIVRAFNPQRGLLRSYPGSPLIARALLRPQDRLVAC 120 Query: 120 EIEPTARKQLIDALRRDAQARVVDLDGWMALPAFVPPNERRGLVLIDPPFEAKDEFERLA 179 E+EP ARK LI ALRRDAQA VVDLDGW+ALPAFVPP ERRGLVLIDPPFE KDEFERLA Sbjct: 121 ELEPVARKHLIGALRRDAQANVVDLDGWVALPAFVPPKERRGLVLIDPPFERKDEFERLA 180 Query: 180 SAFAEAFVKWPTGTYLLWYPVKTRRATDELARSVAAAAAASRPAGKCLRLEFSVAPQEAG 239 FAEAF KWPTG+YLLWYPVK+RRA D+LAR V AA A KCLRLEFSVAPQ A Sbjct: 181 GGFAEAFAKWPTGSYLLWYPVKSRRAADDLARRVGAATGGG--ADKCLRLEFSVAPQTAD 238 Query: 240 AGLVSTGLLLVNPPWTLANELKIILPELEKPLGQGGAGRFRLE 282 L S GLL+VNPPWTL ELK ILPELEKPLGQGGA RFRL+ Sbjct: 239 GPLTSAGLLIVNPPWTLMAELKAILPELEKPLGQGGAARFRLD 281