BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0117.0042.p (327 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774114.1| N5-glutamine S-adenosyl-L-methionine-dependent ... 503 e-140 ref|YP_001207928.1| N5-glutamine S-adenosyl-L-methionine-depende... 492 e-137 ref|YP_001237838.1| N5-glutamine S-adenosyl-L-methionine-depende... 488 e-136 ref|YP_568416.1| N5-glutamine S-adenosyl-L-methionine-dependent ... 481 e-134 ref|YP_779864.1| N5-glutamine S-adenosyl-L-methionine-dependent ... 478 e-133 >ref|NP_774114.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bradyrhizobium japonicum USDA 110] dbj|BAC52739.1| hypothetical adenine-specific methylase [Bradyrhizobium japonicum USDA 110] Length = 319 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 249/327 (76%), Positives = 277/327 (84%), Gaps = 9/327 (2%) Query: 1 MAKHSKVPARRGSAVPRAPRKAAEKAPKVGAGELHTLFDFLRYAVSRFNAAKLVFAHGTT 60 MA+ SK AR +AA K KVG GEL TL D++RY+VSRFN AKL FAHGTT Sbjct: 1 MARASKKTARG---------RAAPKLAKVGRGELVTLIDYVRYSVSRFNEAKLAFAHGTT 51 Query: 61 DPVAEAAFLICETLHLHPDQFENFATARVTVAEGRQILELIERRIATRKPAAYLVNKVYM 120 DPVAEAAFL+CE LHLHPDQFE FA ARVT AEG+ +L+LI +R+ TRKPAAYLVNK+YM Sbjct: 52 DPVAEAAFLVCEALHLHPDQFEAFAHARVTAAEGKTLLDLIHQRVTTRKPAAYLVNKIYM 111 Query: 121 RGLPFYVDERTIVPRSFIGELLDSHFGGDEDGTSLIGDPEEVERVLDLCTGSGCLAILAA 180 RGLPFYVDER IVPRS+IGELLDSHFGGD + SLI P VERVLDLCTGSGCLAILAA Sbjct: 112 RGLPFYVDERVIVPRSYIGELLDSHFGGDGEAGSLIDHPTAVERVLDLCTGSGCLAILAA 171 Query: 181 RHFPNAAVDAVDISKDALEVAARNVADHGLDDRLTLHRGDLFKPLGGNRYDLIISNPPYV 240 HFPNA VDAVDISK ALEVAARNV +HGLD+R+TLHRGDLF PLG NRYDLII+NPPYV Sbjct: 172 YHFPNATVDAVDISKGALEVAARNVGEHGLDERVTLHRGDLFAPLGDNRYDLIITNPPYV 231 Query: 241 DAEGMAALPRECRAEPKIAFDGGADGLDIVRRLLDEAKQHLTPQGGLLCEIGRGRDNLEA 300 DAEGMAALP ECRAEPK+AFDGG DGLD+VRR+L +A +HLTP GGL+CEIGRGR+ ++ Sbjct: 232 DAEGMAALPPECRAEPKLAFDGGVDGLDVVRRILRDAPEHLTPDGGLICEIGRGRELVDE 291 Query: 301 AYPNLPLLWLDTEDSEGEVFWIAAADL 327 A+P LPLLWLDTEDSEGEVFWIAAADL Sbjct: 292 AFPELPLLWLDTEDSEGEVFWIAAADL 318 >ref|YP_001207928.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bradyrhizobium sp. ORS 278] emb|CAL79713.1| putative adenine-specific methylase [Bradyrhizobium sp. ORS 278] Length = 325 Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust. Identities = 246/328 (75%), Positives = 273/328 (83%), Gaps = 6/328 (1%) Query: 1 MAKHSKVPARRGSAVPRAPRKAAEKAPKVGAGELHTLFDFLRYAVSRFNAAKLVFAHGTT 60 MAK K A R + P+ P K PKV AGEL TL D+LRYAVS F +A+LVFAHGTT Sbjct: 2 MAKTVKTAAPRKTQAPKLP-----KLPKVNAGELVTLLDYLRYAVSCFQSAELVFAHGTT 56 Query: 61 DPVAEAAFLICETLHLHPDQFENFATARVTVAEGRQILELIERRIATRKPAAYLVNKVYM 120 DPVAEAAFLI E LHL PDQFE F TARVT AEG+ IL+LI RIATRKPAAYLV+KVYM Sbjct: 57 DPVAEAAFLIGEALHLRPDQFETFITARVTAAEGKTILDLISARIATRKPAAYLVHKVYM 116 Query: 121 RGLPFYVDERTIVPRSFIGELLDSHFGGDE-DGTSLIGDPEEVERVLDLCTGSGCLAILA 179 RGLPFYVDER IVPRSFIGELL++HFGG E DGTSLI DP V+ VLDLCTGSGCLAILA Sbjct: 117 RGLPFYVDERVIVPRSFIGELLETHFGGAEADGTSLIDDPLAVDSVLDLCTGSGCLAILA 176 Query: 180 ARHFPNAAVDAVDISKDALEVAARNVADHGLDDRLTLHRGDLFKPLGGNRYDLIISNPPY 239 +RHFPNA +DAVDISKDAL VAARNVAD+ L +R++LHRGDLF PL RYDLII+NPPY Sbjct: 177 SRHFPNAVIDAVDISKDALAVAARNVADYELGERISLHRGDLFAPLSQRRYDLIITNPPY 236 Query: 240 VDAEGMAALPRECRAEPKIAFDGGADGLDIVRRLLDEAKQHLTPQGGLLCEIGRGRDNLE 299 VDAEGMA LPRECRAEP +AFDGGADGLDI+ R++ EA+ HLT +GGLLCE+GR R +E Sbjct: 237 VDAEGMAGLPRECRAEPALAFDGGADGLDIIHRIIGEARDHLTAEGGLLCEVGRDRPQIE 296 Query: 300 AAYPNLPLLWLDTEDSEGEVFWIAAADL 327 AAYP+LPLLWLDTEDSEGEVFWI A DL Sbjct: 297 AAYPDLPLLWLDTEDSEGEVFWITARDL 324 >ref|YP_001237838.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bradyrhizobium sp. BTAi1] gb|ABQ33932.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Bradyrhizobium sp. BTAi1] Length = 322 Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust. Identities = 241/312 (77%), Positives = 268/312 (85%), Gaps = 2/312 (0%) Query: 18 APRKA-AEKAPKVGAGELHTLFDFLRYAVSRFNAAKLVFAHGTTDPVAEAAFLICETLHL 76 APRKA A K PKV AGEL TL D+LRYAVSRF A LVFAHGTTDPV+EAAFLI E LHL Sbjct: 10 APRKAPAPKLPKVNAGELVTLLDYLRYAVSRFQDADLVFAHGTTDPVSEAAFLIGEALHL 69 Query: 77 HPDQFENFATARVTVAEGRQILELIERRIATRKPAAYLVNKVYMRGLPFYVDERTIVPRS 136 PDQFE+F TARVT AEG+QIL+LI RI TRKPAAYLVNKVYMRGLPFYVDER IVPRS Sbjct: 70 RPDQFESFVTARVTAAEGKQILDLITTRITTRKPAAYLVNKVYMRGLPFYVDERVIVPRS 129 Query: 137 FIGELLDSHFGGDE-DGTSLIGDPEEVERVLDLCTGSGCLAILAARHFPNAAVDAVDISK 195 FIGELL++HFGG E DGTSLI DP V+ VLDLCTGSGCLAILA+RHFPNA +DAVDISK Sbjct: 130 FIGELLETHFGGAEADGTSLIDDPLAVDSVLDLCTGSGCLAILASRHFPNAMIDAVDISK 189 Query: 196 DALEVAARNVADHGLDDRLTLHRGDLFKPLGGNRYDLIISNPPYVDAEGMAALPRECRAE 255 DAL VAA+NVAD+ L +R++LHRGDLF PL RYDLIISNPPYVDAEGMA LP+EC AE Sbjct: 190 DALAVAAKNVADYDLGERISLHRGDLFAPLSQRRYDLIISNPPYVDAEGMAGLPQECGAE 249 Query: 256 PKIAFDGGADGLDIVRRLLDEAKQHLTPQGGLLCEIGRGRDNLEAAYPNLPLLWLDTEDS 315 P +AFDGGADGLDI+ R+L +A+ HLT +GGLLCE+GR R +EA+YP+LPLLWLDTE+S Sbjct: 250 PALAFDGGADGLDIIHRILGQARDHLTAEGGLLCEVGRDRPQIEASYPDLPLLWLDTEES 309 Query: 316 EGEVFWIAAADL 327 EGEVFWI A DL Sbjct: 310 EGEVFWITAQDL 321 >ref|YP_568416.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Rhodopseudomonas palustris BisB5] gb|ABE38515.1| modification methylase, HemK family [Rhodopseudomonas palustris BisB5] Length = 330 Score = 481 bits (1238), Expect = e-134, Method: Compositional matrix adjust. Identities = 237/310 (76%), Positives = 265/310 (85%), Gaps = 2/310 (0%) Query: 18 APRKAAEKAPKVGAGELHTLFDFLRYAVSRFNAAKLVFAHGTTDPVAEAAFLICETLHLH 77 A +AA APKV AGEL TL DF+RYAVSRF A +VFAHGTTDP+AEA FL+ E LHLH Sbjct: 23 AKSRAAVSAPKVAAGELVTLLDFVRYAVSRFAEAGVVFAHGTTDPIAEAVFLVGEALHLH 82 Query: 78 PDQFENFATARVTVAEGRQILELIERRIATRKPAAYLVNKVYMRGLPFYVDERTIVPRSF 137 PDQFE FATARVTV E IL LIERR+ATR PAAYLVNK+YMRG+ FYVDER IVPRS+ Sbjct: 83 PDQFEMFATARVTVREATAILGLIERRVATRLPAAYLVNKIYMRGVQFYVDERVIVPRSY 142 Query: 138 IGELLDSHFGGDEDGTSLIGDPEEVERVLDLCTGSGCLAILAARHFPNAAVDAVDISKDA 197 IGELL+SHF G TSLIGDPE VERVLDLCTGSGCLAILAAR+FP+A +DAVD+SKDA Sbjct: 143 IGELLESHFDGG--ATSLIGDPEAVERVLDLCTGSGCLAILAARNFPHAEIDAVDLSKDA 200 Query: 198 LEVAARNVADHGLDDRLTLHRGDLFKPLGGNRYDLIISNPPYVDAEGMAALPRECRAEPK 257 L VAA+NVADHG+ +RLTLH G+LF PLG RYDLII+NPPYVDAEGMA+LP ECRAEP Sbjct: 201 LAVAAKNVADHGVGERLTLHHGNLFAPLGEARYDLIITNPPYVDAEGMASLPAECRAEPA 260 Query: 258 IAFDGGADGLDIVRRLLDEAKQHLTPQGGLLCEIGRGRDNLEAAYPNLPLLWLDTEDSEG 317 +AFDGG DGLDI+RR+LDEAK HLTP GGLLCE+GRGR +E + NLPLLWLDTE+S+G Sbjct: 261 MAFDGGDDGLDIIRRILDEAKDHLTPDGGLLCEVGRGRALIEEEFSNLPLLWLDTEESDG 320 Query: 318 EVFWIAAADL 327 EVFWIAAADL Sbjct: 321 EVFWIAAADL 330 >ref|YP_779864.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Rhodopseudomonas palustris BisA53] gb|ABJ04884.1| modification methylase, HemK family [Rhodopseudomonas palustris BisA53] Length = 340 Score = 478 bits (1230), Expect = e-133, Method: Compositional matrix adjust. Identities = 239/325 (73%), Positives = 266/325 (81%), Gaps = 6/325 (1%) Query: 5 SKVPARRGSAVPRAPRKAAEKAPKVGAGELHTLFDFLRYAVSRFNAAKLVFAHGTTDPVA 64 S PA+R + VP A + P GEL L DF+RYA SRF A+LVFAHGT DP A Sbjct: 20 STTPAKRRAPVP----PAKKLTPPAKPGELVCLLDFVRYAYSRFIEAELVFAHGTPDPFA 75 Query: 65 EAAFLICETLHLHPDQFENFATARVTVAEGRQILELIERRIATRKPAAYLVNKVYMRGLP 124 EAAFL+CETLHL D F+NFATARVT AE +++L++IERR+ TRKPAAYLVNK+YMRGL Sbjct: 76 EAAFLVCETLHLPLDHFDNFATARVTSAESKKLLDIIERRVTTRKPAAYLVNKIYMRGLS 135 Query: 125 FYVDERTIVPRSFIGELLDSHFGGDEDGTS--LIGDPEEVERVLDLCTGSGCLAILAARH 182 FYVDER IVPRS+IGELL SHFG +D S LIGDP+ VE VLDLCTGSGCLAILA+RH Sbjct: 136 FYVDERVIVPRSYIGELLTSHFGDPDDAESAALIGDPDAVENVLDLCTGSGCLAILASRH 195 Query: 183 FPNAAVDAVDISKDALEVAARNVADHGLDDRLTLHRGDLFKPLGGNRYDLIISNPPYVDA 242 F NA VDAVD+SKDAL VAARNVA+HGLDDR+ LH GDLF PL G YDLIISNPPYVDA Sbjct: 196 FHNAHVDAVDLSKDALAVAARNVAEHGLDDRIALHHGDLFAPLQGMYYDLIISNPPYVDA 255 Query: 243 EGMAALPRECRAEPKIAFDGGADGLDIVRRLLDEAKQHLTPQGGLLCEIGRGRDNLEAAY 302 EGMA LP ECRAEPK+AFDGG DGLDIVRR+LD A+ HL P GGLLCEIGRGR+ +EAA+ Sbjct: 256 EGMAGLPPECRAEPKMAFDGGEDGLDIVRRILDGARMHLQPHGGLLCEIGRGREAMEAAF 315 Query: 303 PNLPLLWLDTEDSEGEVFWIAAADL 327 P LPLLWLDTEDSEGEVFWIAAADL Sbjct: 316 PELPLLWLDTEDSEGEVFWIAAADL 340