BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0117.0032.p         (170 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771579.1| methyltransferase [Bradyrhizobium japonicum USD...    34   7.3  

>ref|NP_771579.1| methyltransferase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50204.1| methyltransferase [Bradyrhizobium japonicum USDA 110]
          Length = 292

 Score = 34.3 bits (77), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 50/125 (40%), Gaps = 17/125 (13%)

Query: 46  LGGRXGQIELRRHH-QRRALA-VVDALAGRALGAEPGHQIVDDPLFEGQAVVAVILIVAG 103
             G  GQ    RH  Q R L  + D L  RA G +PG +++D     G   VA    VA 
Sbjct: 23  WNGPSGQRWADRHAVQERLLGPIADVLIDRA-GPKPGERVIDVGCGSGATTVAFAKAVAP 81

Query: 104 AHRAGRHDKADPGCDERQAQA--------------AHQRQPGRLDQVTAGFGVAHRAIPI 149
              A   D +DP   + +A A               H  +P   D + + FGV   A PI
Sbjct: 82  NGFALGLDVSDPMLSQARALAPKGLPLDFVLADATVHPFEPASFDLLASRFGVMFFADPI 141

Query: 150 SNFVK 154
           ++F  
Sbjct: 142 ASFTN 146