BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0117.0029.p (454 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001207939.1| putative Zn-dependent protease [Bradyrhizobi... 730 0.0 ref|NP_774125.1| zinc protease [Bradyrhizobium japonicum USDA 11... 721 0.0 ref|YP_001237827.1| putative Zn-dependent protease [Bradyrhizobi... 713 0.0 ref|YP_780350.1| peptidase M16 domain-containing protein [Rhodop... 700 0.0 ref|YP_004110873.1| chromogranin/secretogranin [Rhodopseudomonas... 679 0.0 >ref|YP_001207939.1| putative Zn-dependent protease [Bradyrhizobium sp. ORS 278] emb|CAL79724.1| putative Zn-dependent protease [Bradyrhizobium sp. ORS 278] Length = 459 Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/422 (82%), Positives = 385/422 (91%) Query: 32 KIQRLVSPGGIEAWFVQDATVPLIAMEYSFSGGASQDPPGKPGVGNLVADLLDEGSGDLD 91 KIQRLVSPGGIEAWFVQDATVPLIAMEY+F GGASQDP GKPGVGNLVADLLDEGSGDLD Sbjct: 32 KIQRLVSPGGIEAWFVQDATVPLIAMEYAFEGGASQDPAGKPGVGNLVADLLDEGSGDLD 91 Query: 92 SKTYHERLERRAIELGFQSNRDQFRGSLRMLKDNKDEAYDLLRMALTSPHFEPKDVERIR 151 SKT+HERL+RRAIEL FQ +RDQFRGSLRML+D KDEA+DLLR ALTSPHF+ DVERIR Sbjct: 92 SKTFHERLDRRAIELSFQVSRDQFRGSLRMLRDTKDEAFDLLRTALTSPHFDSTDVERIR 151 Query: 152 AQVIANLRRESTNPSSLAGRKFLELAFGDHPYARTATGTLDSVPTIQIPDLKDYTRRIIA 211 +QVI+ LRRE+TNPSSLAGRKFLELAF +HPY R A GTL++VPTI + DLK Y R++A Sbjct: 152 SQVISGLRRETTNPSSLAGRKFLELAFPNHPYGRPANGTLETVPTITVDDLKSYVGRVLA 211 Query: 212 KDTLRVAVVGDVDPDTLGKLLDKTFGGLPAKAELTPVPDVVATRPPQRAFVPLDVPQTVV 271 KDTL+VAVVGDVDP TLGKLLD+TFG LPAKA+LTPVPD+VAT+PPQR VPLDVPQTV+ Sbjct: 212 KDTLKVAVVGDVDPATLGKLLDQTFGALPAKAQLTPVPDIVATKPPQRVLVPLDVPQTVI 271 Query: 272 TFGGPGIARHDPDFMAAYVVNHILGGGGLSSRLYKEVREKRGLAYSIYEALVWMDHSALF 331 TFGGPGI RHDP+FMAAYVVNHILGGGGLSSRLYKEVREKRGLAYS+Y+AL+WMDHSALF Sbjct: 272 TFGGPGIRRHDPNFMAAYVVNHILGGGGLSSRLYKEVREKRGLAYSVYDALLWMDHSALF 331 Query: 332 IGNTGTRADRAGETVDAIEAEVRRIAEEGPTQQELDEAKSYLKGSQMLALDTSSKLAQAM 391 IGNT TR DRAGET+ A+E E+RRIAEEGPTQQELDEAKSY+ GSQMLALDTSSKLAQAM Sbjct: 332 IGNTATRFDRAGETIAAVEQEIRRIAEEGPTQQELDEAKSYINGSQMLALDTSSKLAQAM 391 Query: 392 LQYQLDKLPIDYIEKRNAIVDAVTLDDAKRVAKRLWGNGLLTAIVGRAPQAAAQPVSAPP 451 LQYQLDK+PIDYIEKR+ IV+AVTLDDAK+ AK+LW GLLTA+VGR PQAAA+P AP Sbjct: 392 LQYQLDKMPIDYIEKRSEIVNAVTLDDAKKAAKQLWSQGLLTAVVGRTPQAAAEPGQAPA 451 Query: 452 KA 453 A Sbjct: 452 TA 453 >ref|NP_774125.1| zinc protease [Bradyrhizobium japonicum USDA 110] dbj|BAC52750.1| hypothetical zinc protease [Bradyrhizobium japonicum USDA 110] Length = 483 Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/433 (80%), Positives = 384/433 (88%) Query: 6 TRRAALIGGACAALLTLTSAPSQAAAKIQRLVSPGGIEAWFVQDATVPLIAMEYSFSGGA 65 TRR AL AAL PSQAAAKIQRLVSPGGIEAWFVQDATVPLIAMEYSF+GG+ Sbjct: 34 TRRFALAFVTGAALALAAVQPSQAAAKIQRLVSPGGIEAWFVQDATVPLIAMEYSFAGGS 93 Query: 66 SQDPPGKPGVGNLVADLLDEGSGDLDSKTYHERLERRAIELGFQSNRDQFRGSLRMLKDN 125 +QDP K GV NLV DLLDEGSGDLDSKT+HERL+RRAIEL F + RD FRGSLRML+DN Sbjct: 94 AQDPKDKAGVANLVGDLLDEGSGDLDSKTFHERLDRRAIELSFSATRDTFRGSLRMLRDN 153 Query: 126 KDEAYDLLRMALTSPHFEPKDVERIRAQVIANLRRESTNPSSLAGRKFLELAFGDHPYAR 185 KDEA+DLLRMALTSPHF+ DVERIR+QVI+ LRRE+TNP+SLA RKFLE+AFGDHPY R Sbjct: 154 KDEAFDLLRMALTSPHFDTADVERIRSQVISGLRRETTNPTSLASRKFLEVAFGDHPYGR 213 Query: 186 TATGTLDSVPTIQIPDLKDYTRRIIAKDTLRVAVVGDVDPDTLGKLLDKTFGGLPAKAEL 245 GTLDSVPT+ + D+KDY R++AKD L+VAVVGDVDP TLGKLLD TFG LPAKA L Sbjct: 214 QTNGTLDSVPTVTVADMKDYVGRVLAKDGLKVAVVGDVDPATLGKLLDHTFGSLPAKANL 273 Query: 246 TPVPDVVATRPPQRAFVPLDVPQTVVTFGGPGIARHDPDFMAAYVVNHILGGGGLSSRLY 305 PVPDV A +PPQRAFVPLDVPQTV+TFGGPG+ R DP+FMAAYVVNHILGGGGLSSRLY Sbjct: 274 VPVPDVEAAKPPQRAFVPLDVPQTVITFGGPGVKRSDPNFMAAYVVNHILGGGGLSSRLY 333 Query: 306 KEVREKRGLAYSIYEALVWMDHSALFIGNTGTRADRAGETVDAIEAEVRRIAEEGPTQQE 365 +EVREKRGLAYS++E+L+WM+HSA+FIGNTGTRADRAG+T+DAIE EVRRIAEEGPTQ+E Sbjct: 334 REVREKRGLAYSVFESLLWMEHSAVFIGNTGTRADRAGDTIDAIEKEVRRIAEEGPTQKE 393 Query: 366 LDEAKSYLKGSQMLALDTSSKLAQAMLQYQLDKLPIDYIEKRNAIVDAVTLDDAKRVAKR 425 LDEAKSYLKGSQMLALDTSSKLAQA+LQYQ DKLPIDYIEKRNAIVDAVTLDDAK AKR Sbjct: 394 LDEAKSYLKGSQMLALDTSSKLAQALLQYQQDKLPIDYIEKRNAIVDAVTLDDAKAAAKR 453 Query: 426 LWGNGLLTAIVGR 438 LWG GLLT +VGR Sbjct: 454 LWGQGLLTVVVGR 466 >ref|YP_001237827.1| putative Zn-dependent protease [Bradyrhizobium sp. BTAi1] gb|ABQ33921.1| putative Zn-dependent protease [Bradyrhizobium sp. BTAi1] Length = 460 Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/411 (81%), Positives = 379/411 (92%) Query: 28 QAAAKIQRLVSPGGIEAWFVQDATVPLIAMEYSFSGGASQDPPGKPGVGNLVADLLDEGS 87 +AA KIQRLVSPGGIEAWFVQDATVPLIAMEY+F GGA+QDP GKPGVGNLVADLLDEGS Sbjct: 29 EAATKIQRLVSPGGIEAWFVQDATVPLIAMEYAFQGGAAQDPAGKPGVGNLVADLLDEGS 88 Query: 88 GDLDSKTYHERLERRAIELGFQSNRDQFRGSLRMLKDNKDEAYDLLRMALTSPHFEPKDV 147 G+LDSKT+HERL+RRAIEL FQ RD FRGSLRML+DNKDEA++LLR ALTSPHF+ DV Sbjct: 89 GELDSKTFHERLDRRAIELSFQVARDNFRGSLRMLRDNKDEAFELLRTALTSPHFDSTDV 148 Query: 148 ERIRAQVIANLRRESTNPSSLAGRKFLELAFGDHPYARTATGTLDSVPTIQIPDLKDYTR 207 ERIR+QV++ LRRE+TNPS+LAGRKFLELAF +HPY R + GTL+SVPTI + DLKDYTR Sbjct: 149 ERIRSQVLSGLRRETTNPSALAGRKFLELAFPNHPYGRPSNGTLESVPTITVDDLKDYTR 208 Query: 208 RIIAKDTLRVAVVGDVDPDTLGKLLDKTFGGLPAKAELTPVPDVVATRPPQRAFVPLDVP 267 R++AKDTL+VAVVGDVDP TLGKLLD+TFG LPAKA+LTPVPD+VAT+PP+R V LDVP Sbjct: 209 RVLAKDTLKVAVVGDVDPATLGKLLDQTFGALPAKAQLTPVPDIVATKPPERVLVSLDVP 268 Query: 268 QTVVTFGGPGIARHDPDFMAAYVVNHILGGGGLSSRLYKEVREKRGLAYSIYEALVWMDH 327 QTV+TFGGPGI RHDP+FMAAYVVNH+LGGGGLSSRLYKEVREKRGLAYS+Y+AL+WMDH Sbjct: 269 QTVITFGGPGIRRHDPNFMAAYVVNHVLGGGGLSSRLYKEVREKRGLAYSVYDALLWMDH 328 Query: 328 SALFIGNTGTRADRAGETVDAIEAEVRRIAEEGPTQQELDEAKSYLKGSQMLALDTSSKL 387 SALFIGNT TR DRAGET+ A+E E+RRIAE+GPTQQELDEAKSY+ GSQMLALDTSSKL Sbjct: 329 SALFIGNTATRFDRAGETIAAVEQEIRRIAEDGPTQQELDEAKSYINGSQMLALDTSSKL 388 Query: 388 AQAMLQYQLDKLPIDYIEKRNAIVDAVTLDDAKRVAKRLWGNGLLTAIVGR 438 AQAMLQYQLDK+PIDYIEKR+ IV+AVTLDDAK+ AK+LW GLLTA+VGR Sbjct: 389 AQAMLQYQLDKMPIDYIEKRSEIVNAVTLDDAKKAAKQLWSQGLLTAVVGR 439 >ref|YP_780350.1| peptidase M16 domain-containing protein [Rhodopseudomonas palustris BisA53] gb|ABJ05370.1| peptidase M16 domain protein [Rhodopseudomonas palustris BisA53] Length = 458 Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/449 (75%), Positives = 385/449 (85%), Gaps = 2/449 (0%) Query: 8 RAALIGGACAALLTLTSAPSQAAAKIQRLVSPGGIEAWFVQDATVPLIAMEYSFSGGASQ 67 R A+I AC L L+S + AAAK+QRLVSPGGIEAWFVQDATVPLIAMEY F GGA+Q Sbjct: 10 RTAMIAAACVGLAALSSTAANAAAKVQRLVSPGGIEAWFVQDATVPLIAMEYGFGGGATQ 69 Query: 68 DPPGKPGVGNLVADLLDEGSGDLDSKTYHERLERRAIELGFQSNRDQFRGSLRMLKDNKD 127 DP KPGVG+LVA+LLDEGSGDLDS+T+HERL+RRAIEL F S RDQFRGSLRML +++D Sbjct: 70 DPADKPGVGHLVANLLDEGSGDLDSRTFHERLDRRAIELSFSSTRDQFRGSLRMLTEHRD 129 Query: 128 EAYDLLRMALTSPHFEPKDVERIRAQVIANLRRESTNPSSLAGRKFLELAFGDHPYARTA 187 EA+DLLR ALT P FE DVERIRAQ A LRREST+P+S++ RKF ELAFGDHPY R Sbjct: 130 EAFDLLRGALTQPRFEADDVERIRAQFAATLRRESTSPNSMSTRKFFELAFGDHPYGRLP 189 Query: 188 TGTLDSVPTIQIPDLKDYTRRIIAKDTLRVAVVGDVDPDTLGKLLDKTFGGLPAKAELTP 247 +GTL+S+ I + DL+ YT+R++AKDTL++AVVGDVD TLG+LLDKTFG LPAKA+L Sbjct: 190 SGTLESIAKINVDDLRSYTKRVLAKDTLKIAVVGDVDAQTLGRLLDKTFGALPAKADLVA 249 Query: 248 VPDVVATRPPQRAFVPLDVPQTVVTFGGPGIARHDPDFMAAYVVNHILGGGGLSSRLYKE 307 VP+VVAT+PPQRA V LDVPQT VTFGGPG+ R D DFMAAYVVNHI+GGGGLSSRLY+E Sbjct: 250 VPEVVATKPPQRALVALDVPQTTVTFGGPGLKRDDKDFMAAYVVNHIIGGGGLSSRLYRE 309 Query: 308 VREKRGLAYSIYEALVWMDHSALFIGNTGTRADRAGETVDAIEAEVRRIAEEGPTQQELD 367 VREKRGLAYS+YEAL+WMDHSALFIGNTGTRADR ET++AIE E +RIA+EGPT+QEL Sbjct: 310 VREKRGLAYSVYEALLWMDHSALFIGNTGTRADRVAETIEAIEQETKRIADEGPTEQELA 369 Query: 368 EAKSYLKGSQMLALDTSSKLAQAMLQYQLDKLPIDYIEKRNAIVDAVTLDDAKRVAKRLW 427 EAKSYLKGSQML+LDTSSKLA A+LQYQ D LPIDYIEKRNAIVDAVTLDDAKR AKRLW Sbjct: 370 EAKSYLKGSQMLSLDTSSKLATALLQYQHDNLPIDYIEKRNAIVDAVTLDDAKRAAKRLW 429 Query: 428 GNGLLTAIVGRAPQAAAQ-PVSAPP-KAN 454 +GLLT IVGR QAA Q PV+ PP +AN Sbjct: 430 ADGLLTVIVGRPAQAAVQPPVATPPARAN 458 >ref|YP_004110873.1| chromogranin/secretogranin [Rhodopseudomonas palustris DX-1] gb|ADU46140.1| Chromogranin/secretogranin [Rhodopseudomonas palustris DX-1] Length = 462 Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/449 (72%), Positives = 385/449 (85%), Gaps = 3/449 (0%) Query: 4 SLTRRAALIGGACAAL-LTLTSAPSQAAAKIQRLVSPGGIEAWFVQDATVPLIAMEYSFS 62 S RR AL AC L + L+SAPS+AAAKIQRLV+PGG+EAWFVQDATVPLI+ME SF Sbjct: 6 SSARRIAL--AACVGLAVALSSAPSEAAAKIQRLVTPGGLEAWFVQDATVPLISMEISFD 63 Query: 63 GGASQDPPGKPGVGNLVADLLDEGSGDLDSKTYHERLERRAIELGFQSNRDQFRGSLRML 122 GGASQDP KPGVG++VA+L+DEGSGD+DS ++HERL+RRAI+L + NRD FRGSLRML Sbjct: 64 GGASQDPADKPGVGHMVANLIDEGSGDMDSASFHERLDRRAIKLSYAVNRDYFRGSLRML 123 Query: 123 KDNKDEAYDLLRMALTSPHFEPKDVERIRAQVIANLRRESTNPSSLAGRKFLELAFGDHP 182 K+N+DEA+ LLR +LT P FEPKDVERIRAQ+I+ LRR++ +P++LA RKFLE+AFGDHP Sbjct: 124 KENRDEAFGLLRTSLTRPRFEPKDVERIRAQLISTLRRQALDPNTLASRKFLEVAFGDHP 183 Query: 183 YARTATGTLDSVPTIQIPDLKDYTRRIIAKDTLRVAVVGDVDPDTLGKLLDKTFGGLPAK 242 Y R +TGTL+S+P I D+K Y R++AKDTL++AVVGD+D D L KLLD TFG LPAK Sbjct: 184 YGRPSTGTLESLPKITADDMKSYVGRVLAKDTLKIAVVGDIDADALAKLLDDTFGSLPAK 243 Query: 243 AELTPVPDVVATRPPQRAFVPLDVPQTVVTFGGPGIARHDPDFMAAYVVNHILGGGGLSS 302 A+LTPVPDVVA +PPQR V L+VPQTVV FGGPG+ RHDPDFMAAYVVNHILGGG LSS Sbjct: 244 AQLTPVPDVVAAKPPQRTNVTLEVPQTVVMFGGPGVKRHDPDFMAAYVVNHILGGGSLSS 303 Query: 303 RLYKEVREKRGLAYSIYEALVWMDHSALFIGNTGTRADRAGETVDAIEAEVRRIAEEGPT 362 RLY EVREKRGLAYSIYE L+WM HSALFIG+TGTRADRA ET+DAI AEV+RIAE+GP+ Sbjct: 304 RLYSEVREKRGLAYSIYEQLLWMQHSALFIGSTGTRADRATETIDAITAEVKRIAEQGPS 363 Query: 363 QQELDEAKSYLKGSQMLALDTSSKLAQAMLQYQLDKLPIDYIEKRNAIVDAVTLDDAKRV 422 +QEL EAKSY+ GSQML+LDTS+KLAQA+LQYQ D LPIDYI+KR+ +V+AVTLDDAKRV Sbjct: 364 EQELAEAKSYINGSQMLSLDTSAKLAQALLQYQNDGLPIDYIDKRSEVVNAVTLDDAKRV 423 Query: 423 AKRLWGNGLLTAIVGRAPQAAAQPVSAPP 451 A+RLW NGLLT +VGR P+AAAQP P Sbjct: 424 AQRLWSNGLLTVVVGRQPEAAAQPNMVKP 452