BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0117.0022.p (378 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771946.1| hypothetical protein blr5306 [Bradyrhizobium ja... 402 e-110 ref|YP_001205267.1| putative signal peptide [Bradyrhizobium sp. ... 389 e-106 ref|YP_001240841.1| hypothetical protein BBta_4913 [Bradyrhizobi... 386 e-105 ref|YP_001992561.1| type I phosphodiesterase/nucleotide pyrophos... 369 e-100 ref|NP_948515.1| hypothetical protein RPA3176 [Rhodopseudomonas ... 367 2e-99 >ref|NP_771946.1| hypothetical protein blr5306 [Bradyrhizobium japonicum USDA 110] dbj|BAC50571.1| blr5306 [Bradyrhizobium japonicum USDA 110] Length = 638 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 199/233 (85%), Positives = 212/233 (90%), Gaps = 4/233 (1%) Query: 136 STAAIGKVGPTLLFDHTDR----GKNTIVIDDSTGGKTGVPLSDEMKEALTKAGLPLATP 191 STAAIGKVGPT FDHTD+ G +++V DDSTGGK GV LSDE+K ALTKAGLPLATP Sbjct: 166 STAAIGKVGPTYQFDHTDKPEKPGLHSVVFDDSTGGKNGVALSDEVKAALTKAGLPLATP 225 Query: 192 SRGDNAKAGDAKTPGTTVANVAQQAYMADVATKVVLPMFKARNKPFVLVFWSRDPDGSQH 251 RGDN+KAGDAKTPGTTVANVAQQAY ADVA KVVLPMFKARNKPFVLVFWSRDPDGSQH Sbjct: 226 PRGDNSKAGDAKTPGTTVANVAQQAYFADVAAKVVLPMFKARNKPFVLVFWSRDPDGSQH 285 Query: 252 NTGDSLNTIAPGINGPTSMAGIRNADNNLAQLRKALDELGLSADTNIMISSDHGFSTISK 311 NTGDSLN I PGINGPTSMAGIRNADNNLAQLRKALDELGL+A TNI+IS+DHGFSTISK Sbjct: 286 NTGDSLNQIMPGINGPTSMAGIRNADNNLAQLRKALDELGLAASTNIIISADHGFSTISK 345 Query: 312 ESKSSPSAKIAYGDTPKDFLPMGFLAIDLAKALDLPLFDPNDKNAKVADNAHP 364 ESK+SPSAK++Y DTPKDFLPMGFLA+DLAKALDLPLFDPNDKNAKV N HP Sbjct: 346 ESKTSPSAKVSYDDTPKDFLPMGFLALDLAKALDLPLFDPNDKNAKVEGNKHP 398 >ref|YP_001205267.1| putative signal peptide [Bradyrhizobium sp. ORS 278] emb|CAL77035.1| conserved hypothetical protein; putative membrane protein; putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 618 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 192/244 (78%), Positives = 213/244 (87%), Gaps = 5/244 (2%) Query: 126 LQQIEQSAFXSTAAIGKVGPTLLFDHTDR-----GKNTIVIDDSTGGKTGVPLSDEMKEA 180 + ++ + A STAAIGK+GPT LFDHT ++IVIDDSTGGK GVPL+DE+K+A Sbjct: 135 ILKLARKAGYSTAAIGKLGPTYLFDHTGCPCKPGATSSIVIDDSTGGKAGVPLTDEIKDA 194 Query: 181 LTKAGLPLATPSRGDNAKAGDAKTPGTTVANVAQQAYMADVATKVVLPMFKARNKPFVLV 240 + KAGLPLATPSRGDN KAGDAKTPGTT ANVAQQAYM DVATKVVLPMFKARNKPFVLV Sbjct: 195 IGKAGLPLATPSRGDNGKAGDAKTPGTTSANVAQQAYMVDVATKVVLPMFKARNKPFVLV 254 Query: 241 FWSRDPDGSQHNTGDSLNTIAPGINGPTSMAGIRNADNNLAQLRKALDELGLSADTNIMI 300 FWSRDPDGSQHN GDSLNTI PGINGPTSMA I+NAD+NLA LRKALD+LGL++ TNIM+ Sbjct: 255 FWSRDPDGSQHNQGDSLNTITPGINGPTSMASIKNADDNLAALRKALDDLGLASSTNIMV 314 Query: 301 SSDHGFSTISKESKSSPSAKIAYGDTPKDFLPMGFLAIDLAKALDLPLFDPNDKNAKVAD 360 +DHGFSTISKESK+SPSAK++Y DTPKDFLPMGFLAIDLAKALDLPLFDPNDKNA V D Sbjct: 315 QADHGFSTISKESKTSPSAKVSYDDTPKDFLPMGFLAIDLAKALDLPLFDPNDKNAAVPD 374 Query: 361 NAHP 364 HP Sbjct: 375 GKHP 378 >ref|YP_001240841.1| hypothetical protein BBta_4913 [Bradyrhizobium sp. BTAi1] gb|ABQ36935.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 619 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 192/244 (78%), Positives = 213/244 (87%), Gaps = 5/244 (2%) Query: 126 LQQIEQSAFXSTAAIGKVGPTLLFDHTDR-----GKNTIVIDDSTGGKTGVPLSDEMKEA 180 + ++ + A STAAIGK+GPT LFDHT ++IVIDDSTGGK GV L+DE+K+A Sbjct: 135 ILKLARKAGYSTAAIGKLGPTYLFDHTACPCKPGATSSIVIDDSTGGKNGVALTDEVKDA 194 Query: 181 LTKAGLPLATPSRGDNAKAGDAKTPGTTVANVAQQAYMADVATKVVLPMFKARNKPFVLV 240 + KAGLPLATPSRGDN KAGDAKTPGTT ANVAQQAYM DVATKVVLPMFKARNKPFVLV Sbjct: 195 IGKAGLPLATPSRGDNGKAGDAKTPGTTSANVAQQAYMVDVATKVVLPMFKARNKPFVLV 254 Query: 241 FWSRDPDGSQHNTGDSLNTIAPGINGPTSMAGIRNADNNLAQLRKALDELGLSADTNIMI 300 FWSRDPDGSQHN GDSLNTI PGINGPTSMAGI+NAD+NLA LRKALD+LGL+A TNIM+ Sbjct: 255 FWSRDPDGSQHNHGDSLNTITPGINGPTSMAGIKNADDNLAALRKALDDLGLAASTNIMV 314 Query: 301 SSDHGFSTISKESKSSPSAKIAYGDTPKDFLPMGFLAIDLAKALDLPLFDPNDKNAKVAD 360 +DHGFSTISKESK+SPSAK++Y DTPKDFLPMGFLAIDLAKALDLPLFDPNDKNA V + Sbjct: 315 QADHGFSTISKESKTSPSAKVSYDDTPKDFLPMGFLAIDLAKALDLPLFDPNDKNAAVPE 374 Query: 361 NAHP 364 HP Sbjct: 375 GKHP 378 >ref|YP_001992561.1| type I phosphodiesterase/nucleotide pyrophosphatase [Rhodopseudomonas palustris TIE-1] gb|ACF02086.1| type I phosphodiesterase/nucleotide pyrophosphatase [Rhodopseudomonas palustris TIE-1] Length = 616 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 183/243 (75%), Positives = 203/243 (83%), Gaps = 4/243 (1%) Query: 126 LQQIEQSAFXSTAAIGKVGPTLLFDHTDR----GKNTIVIDDSTGGKTGVPLSDEMKEAL 181 L ++ + STAAIGK+GPTLLFDHTDR G ++IVIDD+TG GVPL D+ K L Sbjct: 135 LLKLARDKGLSTAAIGKLGPTLLFDHTDRADKPGPHSIVIDDATGSPKGVPLPDDFKAEL 194 Query: 182 TKAGLPLATPSRGDNAKAGDAKTPGTTVANVAQQAYMADVATKVVLPMFKARNKPFVLVF 241 K GLPL P+RG+NAKAGDAKTPGT VANV QQAY ADVA K VLP+FK R KPFVLVF Sbjct: 195 DKLGLPLKPPARGENAKAGDAKTPGTLVANVVQQAYFADVAAKAVLPLFKQRGKPFVLVF 254 Query: 242 WSRDPDGSQHNTGDSLNTIAPGINGPTSMAGIRNADNNLAQLRKALDELGLSADTNIMIS 301 WSRDPDGSQHN GDSLN + PGINGPTS+AGIRNADNNLAQLRKALDELGLSA TNI++S Sbjct: 255 WSRDPDGSQHNQGDSLNELTPGINGPTSLAGIRNADNNLAQLRKALDELGLSASTNIIVS 314 Query: 302 SDHGFSTISKESKSSPSAKIAYGDTPKDFLPMGFLAIDLAKALDLPLFDPNDKNAKVADN 361 +DHGFSTISK+SK+SPSAK +YGDTP FLPMGFLAIDLAKAL LPLFDPN+ NA V DN Sbjct: 315 ADHGFSTISKQSKTSPSAKASYGDTPAGFLPMGFLAIDLAKALKLPLFDPNNGNAPVGDN 374 Query: 362 AHP 364 AHP Sbjct: 375 AHP 377 >ref|NP_948515.1| hypothetical protein RPA3176 [Rhodopseudomonas palustris CGA009] emb|CAE28617.1| hypothetical protein RPA3176 [Rhodopseudomonas palustris CGA009] Length = 616 Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 182/243 (74%), Positives = 202/243 (83%), Gaps = 4/243 (1%) Query: 126 LQQIEQSAFXSTAAIGKVGPTLLFDHTDR----GKNTIVIDDSTGGKTGVPLSDEMKEAL 181 L ++ + STAAIGK+GPTLLFDHTDR G ++IVIDD+TG G PL D+ K L Sbjct: 135 LLKLARDKGLSTAAIGKLGPTLLFDHTDRADKPGPHSIVIDDATGSPKGAPLPDDFKAEL 194 Query: 182 TKAGLPLATPSRGDNAKAGDAKTPGTTVANVAQQAYMADVATKVVLPMFKARNKPFVLVF 241 K GLPL P+RG+NAKAGDAKTPGT VANV QQAY ADVA K VLP+FK R KPFVLVF Sbjct: 195 DKLGLPLKPPARGENAKAGDAKTPGTLVANVVQQAYFADVAAKAVLPLFKQRGKPFVLVF 254 Query: 242 WSRDPDGSQHNTGDSLNTIAPGINGPTSMAGIRNADNNLAQLRKALDELGLSADTNIMIS 301 WSRDPDGSQHN GDSLN + PGINGPTS+AGIRNADNNLAQLRKALDELGLSA TNI++S Sbjct: 255 WSRDPDGSQHNQGDSLNELTPGINGPTSLAGIRNADNNLAQLRKALDELGLSASTNIIVS 314 Query: 302 SDHGFSTISKESKSSPSAKIAYGDTPKDFLPMGFLAIDLAKALDLPLFDPNDKNAKVADN 361 +DHGFSTISK+SK+SPSAK +YGDTP FLPMGFLAIDLAKAL LPLFDPN+ NA V DN Sbjct: 315 ADHGFSTISKQSKTSPSAKASYGDTPAGFLPMGFLAIDLAKALKLPLFDPNNGNAPVGDN 374 Query: 362 AHP 364 AHP Sbjct: 375 AHP 377