BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0117.0020.p (178 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08630308.1| hypothetical protein CSIRO_3413 [Bradyrhizobi... 247 5e-64 ref|YP_533214.1| hypothetical protein RPC_3354 [Rhodopseudomonas... 244 3e-63 ref|YP_001205266.1| hypothetical protein BRADO3236 [Bradyrhizobi... 238 3e-61 ref|YP_577421.1| hypothetical protein Nham_2166 [Nitrobacter ham... 236 7e-61 ref|YP_318350.1| hypothetical protein Nwi_1737 [Nitrobacter wino... 234 3e-60 >ref|ZP_08630308.1| hypothetical protein CSIRO_3413 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06687.1| hypothetical protein CSIRO_3413 [Bradyrhizobiaceae bacterium SG-6C] Length = 198 Score = 247 bits (631), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 120/172 (69%), Positives = 137/172 (79%) Query: 6 RKTAAHALTIVRDGVITGEGPTTKGRIHFSRSLDADDAAWCARILTAAAVEHQPVSRAEI 65 R +AHAL VRDGVITGEGPTT GRIHFSR+LDA DAAWCARIL AAA ++PVSRAE Sbjct: 27 RDVSAHALAFVRDGVITGEGPTTTGRIHFSRALDAADAAWCARILNAAANTNEPVSRAEA 86 Query: 66 EALFAINEAAAERSDGGRFDDLLAKAIAHHAASESGLPVPPRTVALSPDTEIDRWAPRQG 125 E LF IN AA+ER+D G+FDDL AKAI HHAA+ SGLPVPPR+VALSP+T I+ WAP Sbjct: 87 ETLFEINRAASERTDDGQFDDLFAKAIVHHAAAASGLPVPPRSVALSPETAIESWAPTTA 146 Query: 126 AKMDTKVLEWIAGQMRGQRRTGRALAAMVATLVGATALPLAAQLPNVFDIGM 177 ++ +VLEWIA QMRG RR RAL +VATL+GA LPLA LPNVFD+GM Sbjct: 147 VGVNIEVLEWIASQMRGTRRNNRALMRLVATLIGAATLPLAHTLPNVFDLGM 198 >ref|YP_533214.1| hypothetical protein RPC_3354 [Rhodopseudomonas palustris BisB18] gb|ABD88895.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 191 Score = 244 bits (624), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 123/171 (71%), Positives = 139/171 (81%), Gaps = 1/171 (0%) Query: 6 RKTAAHALTIVRDGVITGEGPTTKGRIHFSRSLDADDAAWCARILTAAAVEHQPVSRAEI 65 R TAA AL +VRDGVITGEGPTT GRIHFSR+LDADDAA CARILTAAAVE+QPVSRAE Sbjct: 21 RYTAAQALAVVRDGVITGEGPTTMGRIHFSRALDADDAALCARILTAAAVENQPVSRAEA 80 Query: 66 EALFAINEAAAERSDGGRFDDLLAKAIAHHAASESGLPVPPRTVALSPDTEIDRWAPRQG 125 EALF IN AAAERSD G FDDL AKA+ HHAAS SGLPVP RTVAL+PDT I+ WAP Q Sbjct: 81 EALFEINNAAAERSDDGLFDDLFAKAVVHHAASASGLPVPSRTVALAPDTAIESWAPTQA 140 Query: 126 AKMDTKVLEWIAGQMRGQRRTGRALAAMVATLVGATALPLAAQLPNVFDIG 176 ++T+VLEWI+ QMRG RR+ + L +VAT++GA LPL Q P VFD+G Sbjct: 141 VGVNTEVLEWISRQMRGTRRSNQTLTRLVATVIGAATLPL-LQWPGVFDLG 190 >ref|YP_001205266.1| hypothetical protein BRADO3236 [Bradyrhizobium sp. ORS 278] emb|CAL77033.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 187 Score = 238 bits (607), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 122/177 (68%), Positives = 139/177 (78%), Gaps = 1/177 (0%) Query: 1 LHPSCRKTAAHALTIVRDGVITGEGPTTKGRIHFSRSLDADDAAWCARILTAAAVEHQPV 60 L PS +TAA AL IVRDGVITGEGPTT GR+HFSR LD +DAAWC RILTAAA+ PV Sbjct: 12 LEPSSCETAASALGIVRDGVITGEGPTTAGRVHFSRMLDPEDAAWCLRILTAAAINDAPV 71 Query: 61 SRAEIEALFAINEAAAERSDGGRFDDLLAKAIAHHAASESGLPVPPRTVALSPDTEIDRW 120 SRAE EALF I+ AA ER D GRF+DLLAKAIAHH AS SGLPVPPR+VALSP+T I+ W Sbjct: 72 SRAEAEALFEIDAAATERKDDGRFEDLLAKAIAHHTASASGLPVPPRSVALSPETAIESW 131 Query: 121 APRQGAKMDTKVLEWIAGQMRGQRRTGRALAAMVATLVGATALPLAAQLPNVFDIGM 177 AP + T LEW+A +MRG+R+ RAL AMVATLVG + LPL AQLP++ DIGM Sbjct: 132 APMNARGVRTDALEWVAKRMRGKRQGNRALRAMVATLVGVSVLPL-AQLPSMIDIGM 187 >ref|YP_577421.1| hypothetical protein Nham_2166 [Nitrobacter hamburgensis X14] gb|ABE62961.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 190 Score = 236 bits (603), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 114/166 (68%), Positives = 133/166 (80%), Gaps = 1/166 (0%) Query: 12 ALTIVRDGVITGEGPTTKGRIHFSRSLDADDAAWCARILTAAAVEHQPVSRAEIEALFAI 71 AL +VRD VITGEGPT +GR+HFSR LD DA+WC R+LTAAAV +QPVSRAE E LF I Sbjct: 26 ALAMVRDSVITGEGPTARGRVHFSRMLDPTDASWCVRLLTAAAVNNQPVSRAEAEVLFEI 85 Query: 72 NEAAAERSDGGRFDDLLAKAIAHHAASESGLPVPPRTVALSPDTEIDRWAPRQGAKMDTK 131 N+AA ERSD GRFDDL AKAI HHAA+ SGLPVPPR+VALSP T I+ WAP + ++ + Sbjct: 86 NDAATERSDDGRFDDLFAKAIVHHAAAASGLPVPPRSVALSPGTAIESWAPTKAVGVNIE 145 Query: 132 VLEWIAGQMRGQRRTGRALAAMVATLVGATALPLAAQLPNVFDIGM 177 VLEWIAGQMRG+RR+ R L A+VA+L+GA LPL LPNVFDI M Sbjct: 146 VLEWIAGQMRGKRRSNRQLMALVASLIGAATLPL-THLPNVFDISM 190 >ref|YP_318350.1| hypothetical protein Nwi_1737 [Nitrobacter winogradskyi Nb-255] gb|ABA04998.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 190 Score = 234 bits (598), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 114/174 (65%), Positives = 136/174 (78%), Gaps = 1/174 (0%) Query: 4 SCRKTAAHALTIVRDGVITGEGPTTKGRIHFSRSLDADDAAWCARILTAAAVEHQPVSRA 63 S RK AL VR+GVITGEGPT GR+HFSR+LD+ D +WC R+LTAAAV++QPVSR Sbjct: 18 SSRKDVVAALATVRNGVITGEGPTAGGRVHFSRALDSTDTSWCERLLTAAAVDNQPVSRE 77 Query: 64 EIEALFAINEAAAERSDGGRFDDLLAKAIAHHAASESGLPVPPRTVALSPDTEIDRWAPR 123 E EALF IN+AA ERSDGGRFDDL AKAI HHAAS SGLPVP R++AL+PDT I+ WAP Sbjct: 78 EAEALFEINDAATERSDGGRFDDLFAKAIVHHAASASGLPVPSRSIALAPDTAIESWAPT 137 Query: 124 QGAKMDTKVLEWIAGQMRGQRRTGRALAAMVATLVGATALPLAAQLPNVFDIGM 177 + ++ +VLEWIA QMRG+RR R L A+VA+L+GA LPL A LP V D+GM Sbjct: 138 RAVGVNIEVLEWIANQMRGKRRGNRQLMALVASLIGAATLPL-AHLPGVLDLGM 190