BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0116.0046.p (260 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_009582.1| hypothetical protein DVU0358 [Desulfovibrio vul... 124 2e-26 ref|YP_968065.1| hypothetical protein Dvul_2626 [Desulfovibrio v... 124 2e-26 ref|YP_001558776.1| hypothetical protein Cphy_1665 [Clostridium ... 92 6e-17 ref|ZP_04748262.1| putative methyltransferase [Mycobacterium kan... 47 0.003 ref|ZP_06309140.1| hypothetical protein CRC_03030 [Cylindrosperm... 46 0.007 >ref|YP_009582.1| hypothetical protein DVU0358 [Desulfovibrio vulgaris str. Hildenborough] gb|AAS94841.1| hypothetical protein DVU_0358 [Desulfovibrio vulgaris str. Hildenborough] gb|ADP85495.1| hypothetical protein Deval_0324 [Desulfovibrio vulgaris RCH1] Length = 247 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 87/223 (39%), Positives = 114/223 (51%), Gaps = 14/223 (6%) Query: 41 DFLEREFIPALGLNDELLHEQPPELPPNFGKGLHLWQYPNQLAPYLAWLARNASGVSSYM 100 D+LERE +P LGLN E LH+ P L G+GL WQYPNQ YLA +AR V +Y+ Sbjct: 28 DYLEREILPGLGLNGEKLHQFPAHLHTFCGQGLRSWQYPNQFGRYLATIARFP--VQTYV 85 Query: 101 EIGCRWGGMFILVTEWLRNSGADLKTVIALDPIAPTPFLSAYFDLPQQQAAIEPIYMQDV 160 EIG R GG F++ E+LR L + +D I +P L AY + + A ++Q Sbjct: 86 EIGVRHGGTFVVTLEYLRRFNP-LVRGLGID-IFRSPALEAYREHNPRAA-----FLQVD 138 Query: 161 STSPLVGAHVDRLKP-DFVFIDGDHSLRGALRDHLLVRSRARIIVHHDIHSQACPDTTLL 219 S S VD D FIDGDHS D L+ +AR+I HDI + P Sbjct: 139 SRSERFRRLVDDYPVIDLAFIDGDHSFDAVRSDFALLHGKARLIGFHDIVNDDAPGCPEA 198 Query: 220 WKAMKQFEAPSFDMFEFTSQYPSV---NG-SFLGIGAMKRRSA 258 W++++ A + EFT QY NG +FLGIG RR Sbjct: 199 WQSIRFEHARDYVFMEFTEQYFDTVRHNGMTFLGIGLAIRRDT 241 >ref|YP_968065.1| hypothetical protein Dvul_2626 [Desulfovibrio vulgaris DP4] gb|ABM29638.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4] Length = 247 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 87/223 (39%), Positives = 114/223 (51%), Gaps = 14/223 (6%) Query: 41 DFLEREFIPALGLNDELLHEQPPELPPNFGKGLHLWQYPNQLAPYLAWLARNASGVSSYM 100 D+LERE +P LGLN E LH+ P L G+GL WQYPNQ YLA +AR V +Y+ Sbjct: 28 DYLEREILPGLGLNGEKLHQFPAHLHAFCGQGLRSWQYPNQFGRYLATIARFP--VQTYV 85 Query: 101 EIGCRWGGMFILVTEWLRNSGADLKTVIALDPIAPTPFLSAYFDLPQQQAAIEPIYMQDV 160 EIG R GG F++ E+LR L + +D I +P L AY + + A ++Q Sbjct: 86 EIGVRHGGTFVVTLEYLRRFNP-LVRGLGID-IFRSPALEAYREHNPRAA-----FLQVD 138 Query: 161 STSPLVGAHVDRLKP-DFVFIDGDHSLRGALRDHLLVRSRARIIVHHDIHSQACPDTTLL 219 S S VD D FIDGDHS D L+ +AR+I HDI + P Sbjct: 139 SRSERFRRLVDDYPVIDLAFIDGDHSFDAVRSDFALLHGKARLIGFHDIVNDDAPGCPEA 198 Query: 220 WKAMKQFEAPSFDMFEFTSQYPSV---NG-SFLGIGAMKRRSA 258 W++++ A + EFT QY NG +FLGIG RR Sbjct: 199 WQSIRFEHARDYVFMEFTEQYFDTVRHNGMTFLGIGLAIRRDT 241 >ref|YP_001558776.1| hypothetical protein Cphy_1665 [Clostridium phytofermentans ISDg] gb|ABX42037.1| conserved hypothetical protein [Clostridium phytofermentans ISDg] Length = 106 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 44/102 (43%), Positives = 60/102 (58%), Gaps = 1/102 (0%) Query: 96 VSSYMEIGCRWGGMFILVTEWLRNSGADLKTVIALDPIAPTPFLSAYFDLPQQQAAIEPI 155 SSY+EIG RWGG FI++ E LR K IA+D I TPF+ Y ++ + +E + Sbjct: 4 CSSYLEIGSRWGGTFIVICEVLRRMNPGFKRAIAVDLIEETPFIERYSNIAKDD-GLEIV 62 Query: 156 YMQDVSTSPLVGAHVDRLKPDFVFIDGDHSLRGALRDHLLVR 197 Y + STS + KPD +DGDH + GAL+DH+LVR Sbjct: 63 YFKGSSTSDEFKRMITEYKPDISLVDGDHKIAGALKDHMLVR 104 >ref|ZP_04748262.1| putative methyltransferase [Mycobacterium kansasii ATCC 12478] Length = 240 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 41/151 (27%) Query: 74 HLWQYPNQLAPYLAWLA----RNASGVSSYMEI------------GCRWGGMFILVTEWL 117 H W Y N + WL ++ S + +Y EI G R+GG + + Sbjct: 37 HKWYYSNLVWNQTTWLGVQCWKSVSDMWNYQEILFDLKPSLVIEFGSRYGGSALFFANVM 96 Query: 118 RNSGADLKTVI------ALDPIAPTPFLSAYFDLPQQQAAIEPIYMQDVSTSPLVGAHVD 171 R++G K V ALDPIA + + ++++ ST+P V H++ Sbjct: 97 RHAGQPFKVVSVDISHKALDPIA--------------RRDPDILFIESSSTAPAVAEHIE 142 Query: 172 RLKPD-----FVFIDGDHSLRGALRDHLLVR 197 RLK + F +D DHS+ L + L+R Sbjct: 143 RLKGEYRGNIFAILDSDHSMDHVLAEMKLLR 173 >ref|ZP_06309140.1| hypothetical protein CRC_03030 [Cylindrospermopsis raciborskii CS-505] gb|EFA68879.1| hypothetical protein CRC_03030 [Cylindrospermopsis raciborskii CS-505] Length = 256 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 72/183 (39%), Gaps = 26/183 (14%) Query: 77 QYPNQLAPYLAWLARNASGVSSYMEIGCRWGGMFILVTEWLRNSGADLKTVIA--LDPIA 134 Q P +LA +L + + S++E+G +GG +L L D + D Sbjct: 90 QIPTELADFLIFSIQKQP--QSFLEVGVMYGGFSVLCCAVLSKFNKDFHYICVDIEDNFR 147 Query: 135 PTPFLSAYFDLPQQQAAIEPIYMQDVSTSPLVGAHVDRLKPDFVFIDGDHSLRGALRDHL 194 + S+ LP ++A P A K D V+IDGDHS G RD + Sbjct: 148 DWQYFSSI--LPLEKAI------------PATSADFIGKKFDLVYIDGDHSYHGMKRDFM 193 Query: 195 LVRSRARIIVHHDIHSQACPD----TTLLWKAMKQFEAPSFDMFEFTSQYPSVNGSFLGI 250 V A+ HDI++ T W +K S ++E + + ++GI Sbjct: 194 NVGRHAKFCAFHDINATEYDHLDGGTRRCWNDLKLSYCHSASIWEIS----HIAEEWMGI 249 Query: 251 GAM 253 G + Sbjct: 250 GII 252