BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0116.0020.p (231 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001237754.1| phage shock protein A, PspA [Bradyrhizobium ... 365 4e-99 ref|YP_001208022.1| putative PspA/IM30 family protein [Bradyrhiz... 363 1e-98 ref|NP_774253.1| hypothetical protein bll7613 [Bradyrhizobium ja... 359 2e-97 ref|YP_003069216.1| hypothetical protein METDI3726 [Methylobacte... 179 2e-43 ref|YP_002964186.1| hypothetical protein MexAM1_META1p3161 [meth... 177 2e-42 >ref|YP_001237754.1| phage shock protein A, PspA [Bradyrhizobium sp. BTAi1] gb|ABQ33848.1| phage shock protein A, PspA [Bradyrhizobium sp. BTAi1] Length = 232 Score = 365 bits (936), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 194/227 (85%), Positives = 210/227 (92%) Query: 1 MFKTVLTLFRGSVAAAEEELQDRTALVILDQQMRDAAAAVDRSKRTLALAIAGDQQEGRR 60 MFKTVLTLFRG+VA AEEELQDRTALVILDQQMRDAAAAV+RSKR LALAIA DQQEGRR Sbjct: 1 MFKTVLTLFRGTVAVAEEELQDRTALVILDQQMRDAAAAVERSKRALALAIAQDQQEGRR 60 Query: 61 LDATNARIADLEVRASAALEGGREDLAREAAQAIANLEAERDAAMTARALFASEITRLKR 120 L+AT RIADLEVRA+AAL+GGREDLAREAAQAIA LEAERDAA TARALFA+EITRLK+ Sbjct: 61 LEATLTRIADLEVRATAALDGGREDLAREAAQAIAGLEAERDAAKTARALFATEITRLKK 120 Query: 121 HVGNAEARIAELDRGRRLARASEAVRSLRRSGIEAARPYESTLPEAEATLKRLREGEMEI 180 HV AEARIAELDRGRR+ARA+EAVR+LRR GIEAARPYE TLPEAEATLKRLRE +ME Sbjct: 121 HVAGAEARIAELDRGRRIARAAEAVRNLRRGGIEAARPYECTLPEAEATLKRLRERQMEA 180 Query: 181 QAAYEALIEIDAAAGPLATAEKLAEQGFGPRMKSTADDVLARLKAKR 227 QAA EAL+E+DAA GP+ TAEKLAEQGFGPR+K+TADDVLARLKA R Sbjct: 181 QAADEALMELDAATGPITTAEKLAEQGFGPRIKTTADDVLARLKAGR 227 >ref|YP_001208022.1| putative PspA/IM30 family protein [Bradyrhizobium sp. ORS 278] emb|CAL79807.1| Putative PspA/IM30 family protein [Bradyrhizobium sp. ORS 278] Length = 232 Score = 363 bits (932), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 193/227 (85%), Positives = 210/227 (92%) Query: 1 MFKTVLTLFRGSVAAAEEELQDRTALVILDQQMRDAAAAVDRSKRTLALAIAGDQQEGRR 60 MFKTVLTLFRG+VA AEEELQDRTAL+ILDQQMRDAAAAV+RSKR LALA A DQQEGRR Sbjct: 1 MFKTVLTLFRGTVAVAEEELQDRTALLILDQQMRDAAAAVERSKRALALATAQDQQEGRR 60 Query: 61 LDATNARIADLEVRASAALEGGREDLAREAAQAIANLEAERDAAMTARALFASEITRLKR 120 L+AT ARI DLEVRA+AAL+GGREDLAREAAQAIA LEAERDAA TARALFA+EI RLKR Sbjct: 61 LEATLARITDLEVRATAALDGGREDLAREAAQAIAGLEAERDAARTARALFATEIARLKR 120 Query: 121 HVGNAEARIAELDRGRRLARASEAVRSLRRSGIEAARPYESTLPEAEATLKRLREGEMEI 180 HV NAEARIAELDRGRR+ARA+EAVR+LRR GIEAARPYE TLPEAEATLKRLRE +ME Sbjct: 121 HVANAEARIAELDRGRRIARAAEAVRNLRRGGIEAARPYECTLPEAEATLKRLRERQMEA 180 Query: 181 QAAYEALIEIDAAAGPLATAEKLAEQGFGPRMKSTADDVLARLKAKR 227 QAA EAL+E+DAA+GP+ TAEKLAEQGFGPR+K+TADDVLARLKA R Sbjct: 181 QAADEALMELDAASGPITTAEKLAEQGFGPRIKTTADDVLARLKAAR 227 >ref|NP_774253.1| hypothetical protein bll7613 [Bradyrhizobium japonicum USDA 110] dbj|BAC52878.1| bll7613 [Bradyrhizobium japonicum USDA 110] Length = 231 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 191/231 (82%), Positives = 214/231 (92%), Gaps = 1/231 (0%) Query: 1 MFKTVLTLFRGSVAAAEEELQDRTALVILDQQMRDAAAAVDRSKRTLALAIAGDQQEGRR 60 MFKTV+TLFRGSVAAA EEL+DRTAL+ILDQQMRDAAAAV+RSKRTLALAIA DQQEGR+ Sbjct: 1 MFKTVVTLFRGSVAAAGEELEDRTALLILDQQMRDAAAAVERSKRTLALAIAQDQQEGRK 60 Query: 61 LDATNARIADLEVRASAALEGGREDLAREAAQAIANLEAERDAAMTARALFASEITRLKR 120 L+AT ARIADLE RA AAL+GGREDLA+EAA+AIA LEA+RDAAMTARALFA+EI RLKR Sbjct: 61 LEATLARIADLETRAVAALDGGREDLAKEAAEAIAGLEADRDAAMTARALFATEIIRLKR 120 Query: 121 HVGNAEARIAELDRGRRLARASEAVRSLRRSGIEAARPYESTLPEAEATLKRLREGEMEI 180 HV +A+ARI ELDRGRRLARASEAVRSLRRSGIEAARPYESTLPEAE+TL+RLRE +ME Sbjct: 121 HVASAQARITELDRGRRLARASEAVRSLRRSGIEAARPYESTLPEAESTLRRLRERQMEA 180 Query: 181 QAAYEALIEIDAAAGPLATAEKLAEQGFGPRMKSTADDVLARLKAK-RPNA 230 QAA +AL E+DAA GPL TAE+LAEQGFGPR+K+TADDVLARLK+K +P A Sbjct: 181 QAADDALFELDAATGPLTTAERLAEQGFGPRLKTTADDVLARLKSKHQPTA 231 >ref|YP_003069216.1| hypothetical protein METDI3726 [Methylobacterium extorquens DM4] emb|CAX25365.1| conserved hypothetical protein [Methylobacterium extorquens DM4] Length = 230 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 153/226 (67%), Gaps = 5/226 (2%) Query: 1 MFKTVLTLFRGSVAAAEEELQDRTALVILDQQMRDAAAAVDRSKRTLALAIAGDQQEGRR 60 M + TL RG+ A A EE DR AL++LDQQ+R+ AA ++R +R LA A+AGD E RR Sbjct: 1 MLTLLRTLARGAAAQACEEAHDRHALLVLDQQIRETAADLERGRRMLAAAMAGDSAEARR 60 Query: 61 LDATNARIADLEVRASAALEGGREDLAREAAQAIANLEAERDAAMTARALFASEITRLKR 120 L AR ADLE RA AAL GREDLAREAA+AI LEAERDA ARA FA+E+ R++ Sbjct: 61 LTQVEARAADLETRAVAALAAGREDLAREAAEAIMGLEAERDALRAARATFAAEVVRMRA 120 Query: 121 HVGNAEARIAELDRGRRLARASEAVRSLRRSGIEAARPYESTLPEAEATLKRLREGEMEI 180 + +A R A L+RGRR+A ASEAVR LRR+ E+ R +TL EAEATL RL+ + E Sbjct: 121 VLADATRRQAALERGRRVAAASEAVRRLRRT--ESKRDR-ATLREAEATLARLQRIQAEA 177 Query: 181 QAAYEALIEIDAAAGPLATAEKLAEQGFGPRMKSTADDVLARLKAK 226 +AL I+ L AE+L +GFGPR + ++DDVLARL+++ Sbjct: 178 TDTDDALAAIETPEETL--AERLEREGFGPRTRPSSDDVLARLRSR 221 >ref|YP_002964186.1| hypothetical protein MexAM1_META1p3161 [methylobacterium extorquens AM1] gb|ACS40909.1| conserved hypothetical protein [Methylobacterium extorquens AM1] Length = 230 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 116/226 (51%), Positives = 152/226 (67%), Gaps = 5/226 (2%) Query: 1 MFKTVLTLFRGSVAAAEEELQDRTALVILDQQMRDAAAAVDRSKRTLALAIAGDQQEGRR 60 M + TL RG+ A A EE+ DR AL++LDQQ+R+ AA ++R +R LA A+AG E RR Sbjct: 1 MLTLLRTLARGAAAQACEEVHDRHALLVLDQQIRETAADLERGRRMLAAAMAGHSAEARR 60 Query: 61 LDATNARIADLEVRASAALEGGREDLAREAAQAIANLEAERDAAMTARALFASEITRLKR 120 L AR ADLE RA AAL GREDLA EAA+AI +LEAERDA ARA FA+E+ R++ Sbjct: 61 LTQVEARAADLETRAVAALAAGREDLAHEAAEAITSLEAERDALRAARATFAAEVVRMRT 120 Query: 121 HVGNAEARIAELDRGRRLARASEAVRSLRRSGIEAARPYESTLPEAEATLKRLREGEMEI 180 + +A R A L+RGRR+A ASEAVR LRR+ E R +TL +AEATL RL+ + E Sbjct: 121 VLADATRRQAALERGRRVAAASEAVRRLRRT--EGVRDR-ATLRDAEATLARLQRLQAEA 177 Query: 181 QAAYEALIEIDAAAGPLATAEKLAEQGFGPRMKSTADDVLARLKAK 226 +AL I+ L AE+L +GFGPR + ++DDVLARL+++ Sbjct: 178 TDTDDALAAIETPEETL--AERLEREGFGPRTRPSSDDVLARLRSR 221