BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0116.0019.p (202 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774254.1| transcriptional regulator [Bradyrhizobium japon... 296 2e-78 ref|YP_001237753.1| TetR family transcriptional regulator [Brady... 280 7e-74 ref|YP_001208023.1| TetR family transcriptional regulator [Brady... 265 3e-69 ref|ZP_07375654.1| transcriptional regulatory protein [Ahrensia ... 169 2e-40 ref|YP_004089027.1| tetr family transcriptional regulator [Astic... 168 4e-40 >ref|NP_774254.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC52879.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 202 Score = 296 bits (757), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 145/202 (71%), Positives = 169/202 (83%) Query: 1 MSKALERRAKLREALIEAAERAIAAKGLGGLKTRELAQEIGVANGGVYNLVEDVDELILR 60 M+KALERRAKLR LI+AAER IA +GL GLKTR+LA+EIG ANG VYNLV DVDEL+LR Sbjct: 1 MTKALERRAKLRTDLIQAAERMIAERGLAGLKTRDLAREIGCANGAVYNLVADVDELVLR 60 Query: 61 VGSRTLARLDASLSLAEIGGAAAPREMLVRIAVAYCDFAADNLELWRALFEHRMQPGKPV 120 VGSRTL RLD +LS AE G +P+E LVRIA+AYCDFAA+NLELWRALFEHRM K + Sbjct: 61 VGSRTLHRLDEALSAAERAGEPSPQETLVRIAIAYCDFAAENLELWRALFEHRMAADKIL 120 Query: 121 PEWAITEQMELFRHIYKPLAALFPQRSPAQLGVTARSLFSAVHGMVALGLEHKLIAVPIG 180 P+W++ +Q++LFRHIY PLA L P+RS +LG+TARSLFSAVHGMVALGLE KL+AVP+ Sbjct: 121 PDWSVDDQLQLFRHIYHPLALLLPKRSQEELGITARSLFSAVHGMVALGLEQKLVAVPLP 180 Query: 181 ALRSEIATLTRAMVDGLTARKE 202 ALR EIA L RAM+DGL AR E Sbjct: 181 ALRKEIANLVRAMIDGLIARAE 202 >ref|YP_001237753.1| TetR family transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ33847.1| transcriptional regulator, TetR family [Bradyrhizobium sp. BTAi1] Length = 208 Score = 280 bits (717), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 151/201 (75%), Positives = 166/201 (82%) Query: 1 MSKALERRAKLREALIEAAERAIAAKGLGGLKTRELAQEIGVANGGVYNLVEDVDELILR 60 MSK LERRAK REALIEAAERAIAAKGL GLKTR+LAQEIGVANG VYNLV DVDEL+L Sbjct: 1 MSKTLERRAKQREALIEAAERAIAAKGLSGLKTRDLAQEIGVANGAVYNLVADVDELVLM 60 Query: 61 VGSRTLARLDASLSLAEIGGAAAPREMLVRIAVAYCDFAADNLELWRALFEHRMQPGKPV 120 VGSRTLARLDA LS AE G+ P LVRIAVAYCDFAA NLELWRALFEHRM K + Sbjct: 61 VGSRTLARLDAELSAAESAGSPGPEAALVRIAVAYCDFAAHNLELWRALFEHRMAAEKTL 120 Query: 121 PEWAITEQMELFRHIYKPLAALFPQRSPAQLGVTARSLFSAVHGMVALGLEHKLIAVPIG 180 P+WAI +QM LFRHI++PLAALFPQ+S ++ V ARSLFSAVHGMVALGLE KLIAVP+ Sbjct: 121 PDWAIADQMHLFRHIHQPLAALFPQQSFDEISVMARSLFSAVHGMVALGLEQKLIAVPLA 180 Query: 181 ALRSEIATLTRAMVDGLTARK 201 LR +IAT+ +AMV GL A Sbjct: 181 LLREQIATMVKAMVSGLVANS 201 >ref|YP_001208023.1| TetR family transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL79808.1| putative Transcriptional regulatory protein, TetR family [Bradyrhizobium sp. ORS 278] Length = 183 Score = 265 bits (677), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 131/177 (74%), Positives = 145/177 (81%) Query: 23 IAAKGLGGLKTRELAQEIGVANGGVYNLVEDVDELILRVGSRTLARLDASLSLAEIGGAA 82 I KGL GLKTR+LAQEIGVANG VYNLV DVDEL+L VGSRTLARLDA LS AE G Sbjct: 2 IRTKGLAGLKTRDLAQEIGVANGAVYNLVADVDELVLMVGSRTLARLDAELSQAESAGPP 61 Query: 83 APREMLVRIAVAYCDFAADNLELWRALFEHRMQPGKPVPEWAITEQMELFRHIYKPLAAL 142 LVRIA+AYCDFAA NLELWRALFEHRM P KP+P+WAI +QM LFRHI++PLAAL Sbjct: 62 DSEGALVRIAIAYCDFAAHNLELWRALFEHRMPPEKPLPDWAIADQMHLFRHIHQPLAAL 121 Query: 143 FPQRSPAQLGVTARSLFSAVHGMVALGLEHKLIAVPIGALRSEIATLTRAMVDGLTA 199 FPQRS + VTARSLFSAVHGMVALGLE KLIAVP+ ALR +IAT+ +AMV GL + Sbjct: 122 FPQRSFDDISVTARSLFSAVHGMVALGLEQKLIAVPLAALRQQIATMVQAMVTGLVS 178 >ref|ZP_07375654.1| transcriptional regulatory protein [Ahrensia sp. R2A130] gb|EFL89105.1| transcriptional regulatory protein [Ahrensia sp. R2A130] Length = 201 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 91/201 (45%), Positives = 118/201 (58%), Gaps = 3/201 (1%) Query: 1 MSKALERRAKLREALIEAAERAIAAKGLGGLKTRELAQEIGVANGGVYNLVEDVDELILR 60 MSK ER+A+L E LIEAAE I A +G L R+LA ++G + G +YNL +D+D LIL Sbjct: 1 MSKVAERKARLHEQLIEAAETRIEAHSVGRLHARDLAADVGCSIGTIYNLFDDLDALILH 60 Query: 61 VGSRTLARLDASL--SLAEIGGAAAPREMLVRIAVAYCDFAADNLELWRALFEHRMQPGK 118 V RTL R+D + S+A+ G P +V + YCDFA N LW ALFEH + Sbjct: 61 VSFRTLKRIDTVMAESIADTG-ETEPLAHMVTLGRTYCDFAVTNRNLWGALFEHALPADY 119 Query: 119 PVPEWAITEQMELFRHIYKPLAALFPQRSPAQLGVTARSLFSAVHGMVALGLEHKLIAVP 178 P+P W + Q+ LFRHI KPL P +G TARSLFS VHGMV+L LE ++ V Sbjct: 120 PLPGWVLEGQLSLFRHIEKPLTHYMKGSDPMLVGRTARSLFSMVHGMVSLSLERRVSGVN 179 Query: 179 IGALRSEIATLTRAMVDGLTA 199 + L + + R V GL A Sbjct: 180 LDMLNEQTEFMIRTFVKGLEA 200 >ref|YP_004089027.1| tetr family transcriptional regulator [Asticcacaulis excentricus CB 48] gb|ADU14876.1| TetR family transcriptional regulator [Asticcacaulis excentricus CB 48] Length = 202 Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 102/203 (50%), Positives = 134/203 (66%), Gaps = 8/203 (3%) Query: 1 MSKA-----LERRAKLREALIEAAERAIAAKGLGGLKTRELAQEIGVANGGVYNLVEDVD 55 MSKA L R A+ EAL+++AE+ I G+G LK R+LA +IGVA GG+YN+V D+D Sbjct: 1 MSKAPSATTLRREAQF-EALMQSAEKRICEDGVGALKARDLASDIGVALGGLYNIVADMD 59 Query: 56 ELILRVGSRTLARLDASLSLAEIGGAAA-PREMLVRIAVAYCDFAADNLELWRALFEHRM 114 +L+LR+ RT+ RLDA+L AA P E+L IA+AY DFA NL+LWRALFE R+ Sbjct: 60 DLMLRLAQRTMVRLDAALEAGAASAAAERPVEVLEGIALAYYDFARQNLQLWRALFEMRL 119 Query: 115 QPGKPVPEWAITEQMELFRHIYKPLAALFPQRSPAQLGVTARSLFSAVHGMVALGLEHKL 174 + +PEW I Q+ LFRH+ P+ AL P S A+ + AR+LFSAVHG+V +GLE +L Sbjct: 120 K-NPALPEWNIQAQLGLFRHMNAPMTALMPAASEAERILVARTLFSAVHGIVFVGLEERL 178 Query: 175 IAVPIGALRSEIATLTRAMVDGL 197 IAVP AL +I L R L Sbjct: 179 IAVPQEALAQQIRWLVRVACKDL 201