BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0116.0014.p (191 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07385351.1| transcriptional regulator, TetR family [Paeni... 117 1e-24 ref|YP_001832038.1| TetR family transcriptional regulator [Beije... 116 2e-24 ref|YP_002132257.1| transcriptional regulator, TetR family [Phen... 113 1e-23 emb|CCB73459.1| putative tetR-family transcriptional regulator [... 112 3e-23 ref|YP_003011843.1| TetR family transcriptional regulator [Paeni... 111 5e-23 >ref|ZP_07385351.1| transcriptional regulator, TetR family [Paenibacillus curdlanolyticus YK9] gb|EFM12499.1| transcriptional regulator, TetR family [Paenibacillus curdlanolyticus YK9] Length = 193 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 98/192 (51%), Gaps = 2/192 (1%) Query: 1 MARPRSFDPDDVLEIARQMFWQKGFQATSLDEITAASGVAKPSLYAAFGDKNALFLKVLD 60 M RPR FD L A Q+FW+KG++ATS+ ++T G+ +PSLYAAFG K LF VL Sbjct: 1 MVRPREFDEQQALSAAMQVFWEKGYEATSISDLTTRMGIQRPSLYAAFGGKKELFETVLH 60 Query: 61 RYHDGILGWAERVLAQPGPARDVIRQWLTGFIPYCSGEKGQRGCLSINSATDGSLDQVEL 120 +Y L + E +L++ AR+ +R +L G I G + GCL IN+ + + Sbjct: 61 KYTQISLTYIENLLSRAPSAREAVRIYLQGIIEGGGGRQTNLGCLCINTMVELAPHDQSF 120 Query: 121 RKSIERYNRRLEELLRTRLR--TDRAQFSKGFDPDVTAHTIMVVHAGLLALAHQRPDWKQ 178 + Y R+ ELLR + + + + G + A + V GL P+ Sbjct: 121 AHLTKDYQLRITELLRQTIEDGIRKGELASGLNAVAIARALTVSAVGLAVTMKSAPEHAY 180 Query: 179 VKAVIDQVMSLL 190 V+ + ++++LL Sbjct: 181 VENAVTELLTLL 192 >ref|YP_001832038.1| TetR family transcriptional regulator [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB94549.1| transcriptional regulator, TetR family [Beijerinckia indica subsp. indica ATCC 9039] Length = 193 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/187 (37%), Positives = 98/187 (52%), Gaps = 6/187 (3%) Query: 1 MARPRSFDPDDVLEIARQMFWQKGFQATSLDEITAASGVAKPSLYAAFGDKNALFLKVLD 60 M RPR FD D+ L+ A +FW+ G++ TSL ++T A G+ KPSLYAAFG+K LF K LD Sbjct: 1 MGRPREFDLDEALDRALALFWRNGYEGTSLADLTEALGITKPSLYAAFGNKEELFRKALD 60 Query: 61 RYHDGILGWAERVLAQPGPARDVIRQWLTGFIPYCSGEKGQRGCLSINSATDGSLDQVEL 120 RY+ + + + LA+P AR V+ L G++ +G++ G L IN A S + Sbjct: 61 RYYQTYMRFIAKALAEP-KARLVVETLLDGYVKIATGQQTPAGSLGINGALVCSEASESI 119 Query: 121 RKSIERYNRRLEELLRTRL--RTDRAQFSKGFDPDVTAHTIMVVHAGLLALAH---QRPD 175 RK + E LLR RL D F DP A +M + GL A R D Sbjct: 120 RKELTARRVLDETLLRQRLGRARDEGDFPMAVDPAAFARFVMTLAIGLCVQAMAGVTRKD 179 Query: 176 WKQVKAV 182 ++V A Sbjct: 180 LQEVVAT 186 >ref|YP_002132257.1| transcriptional regulator, TetR family [Phenylobacterium zucineum HLK1] gb|ACG79828.1| transcriptional regulator, TetR family [Phenylobacterium zucineum HLK1] Length = 207 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/186 (39%), Positives = 94/186 (50%), Gaps = 1/186 (0%) Query: 6 SFDPDDVLEIARQMFWQKGFQATSLDEITAASGVAKPSLYAAFGDKNALFLKVLDRYHDG 65 SFDPD VLE AR +FW G+ ATSLD++ AA+G+ +PSLYAAFGDK AL+L L R D Sbjct: 18 SFDPDAVLEKARAVFWNLGYAATSLDDLAAATGLNRPSLYAAFGDKRALYLAALGRSRDE 77 Query: 66 ILGWAERVLAQPGPARDVIRQWLTGFIP-YCSGEKGQRGCLSINSATDGSLDQVELRKSI 124 LG R L P R VI I Y +GE GQRGC + +A +++ E+R + Sbjct: 78 ALGALGRALQPERPLRQVIAFIFERSIELYRAGEVGQRGCFVVGTAVTQAVEDAEVRSLV 137 Query: 125 ERYNRRLEELLRTRLRTDRAQFSKGFDPDVTAHTIMVVHAGLLALAHQRPDWKQVKAVID 184 + R E R R D Q + G P A L A D ++K V D Sbjct: 138 ADFIERTEAAFRARFAADAGQLAPGLSPAAAAAVAAATLHTLAIRARTGADGPELKRVAD 197 Query: 185 QVMSLL 190 + L Sbjct: 198 AALEAL 203 >emb|CCB73459.1| putative tetR-family transcriptional regulator [Streptomyces cattleya NRRL 8057] Length = 194 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 103/192 (53%), Gaps = 2/192 (1%) Query: 1 MARPRSFDPDDVLEIARQMFWQKGFQATSLDEITAASGVAKPSLYAAFGDKNALFLKVLD 60 MAR + FDPD L+ A ++FW++G++ATS+ ++ G+A+ S+Y FG K L+LK LD Sbjct: 1 MARTKEFDPDAALDAALELFWRRGYEATSMADLVEHLGIARASVYGTFGSKRELYLKALD 60 Query: 61 RYHDGILGWAERVLAQPGPARDVIRQWLTGFIPYCSGEKGQRGCLSINSATDGSLDQVEL 120 RY + L++PGPA +R+ + F + +RGC N+A + + E Sbjct: 61 RYQESTAEGTLAALSEPGPALPAVRRLVEAFGAQTLQDAERRGCFVTNTAVELAGSDAEA 120 Query: 121 RKSIERYNRRLEELLRTRLRTDRAQ--FSKGFDPDVTAHTIMVVHAGLLALAHQRPDWKQ 178 + +ER LE + L RAQ + G +P A ++V+ GL + RP+ ++ Sbjct: 121 ARRVERSWDGLESAIAGALTRARAQGELAAGQNPTALARFLVVLLQGLRVMGRARPEPER 180 Query: 179 VKAVIDQVMSLL 190 V+ + +++L Sbjct: 181 VRDAVRAALAVL 192 >ref|YP_003011843.1| TetR family transcriptional regulator [Paenibacillus sp. JDR-2] gb|ACT01757.1| transcriptional regulator, TetR family [Paenibacillus sp. JDR-2] Length = 194 Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 104/195 (53%), Gaps = 5/195 (2%) Query: 1 MARPRSFDPDDVLEIARQMFWQKGFQATSLDEITAASGVAKPSLYAAFGDKNALFLKVLD 60 MARPR FD D VL+ A ++FW+KG++ TS+ ++ +GV + SLY FGDKN LFL LD Sbjct: 1 MARPREFDQDAVLQKAMELFWEKGYERTSIQDLVERTGVHRGSLYDTFGDKNQLFLTCLD 60 Query: 61 RYHDGILGWAERVLAQPGPARDVIRQWLTGFIPYC-SGEKGQRGCLSINSATD-GSLDQV 118 R+ +G G A +L + GPA++V+ ++ I S E G+RGCL N+A + G +D V Sbjct: 61 RFREGNRGHAYTILEEKGPAKEVLWRYFQRLIDVAMSDENGRRGCLIANTAMEMGKVDPV 120 Query: 119 ELRKSIERYNRRLEELLRTRLR--TDRAQFSKGFDPDVTAHTIMVVHAGLLALAHQRPDW 176 + IE Y +E + L + + TA ++ GL LA D Sbjct: 121 -VSFRIEAYTLDMETNFKKFLMRAQQQGELKTKHTVQETARFLLNTRNGLYVLAKIATDR 179 Query: 177 KQVKAVIDQVMSLLA 191 + ++ MS+L Sbjct: 180 QVLEDAAKVAMSILV 194