BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0116.0005.p (287 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_533157.1| putative lipoprotein [Rhodopseudomonas palustri... 491 e-137 ref|YP_001207538.1| TPR repeat-containing protein [Bradyrhizobiu... 491 e-137 ref|NP_773234.1| hypothetical protein bll6594 [Bradyrhizobium ja... 489 e-136 ref|YP_570509.1| putative lipoprotein [Rhodopseudomonas palustri... 484 e-135 ref|YP_485625.1| putative lipoprotein [Rhodopseudomonas palustri... 482 e-134 >ref|YP_533157.1| putative lipoprotein [Rhodopseudomonas palustris BisB18] gb|ABD88838.1| putative lipoprotein [Rhodopseudomonas palustris BisB18] Length = 289 Score = 491 bits (1264), Expect = e-137, Method: Compositional matrix adjust. Identities = 232/287 (80%), Positives = 256/287 (89%), Gaps = 10/287 (3%) Query: 11 VSGLTKAARTLRFAAGLIVLAMPLSGCGTGALWDKFMAKDDTFVDEPADKLYNEGLYMMN 70 + G + AR LRFAA LIVL +PLSGCGTGALWDKFM KD+T+ DEPADKLYNEGLY+MN Sbjct: 3 LCGGARTARGLRFAASLIVLTLPLSGCGTGALWDKFMTKDETYTDEPADKLYNEGLYLMN 62 Query: 71 EKKDLKAASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVTLHPGSP 130 + KD KAASKKFEEVDRQHPYSDWARKSLLMSAY+FY+AGDYDSCIGSATRYVT+HPGSP Sbjct: 63 KGKDPKAASKKFEEVDRQHPYSDWARKSLLMSAYAFYEAGDYDSCIGSATRYVTMHPGSP 122 Query: 131 DASYAQYLIAASHFDQIPDISRDQSRTEKAIAALEEVVRKYPTSEYATQAKSKIQAARDQ 190 DA+YAQYLIAASH+DQIPDISRDQ RTEKAIAALEEV+RKYPTSEYAT AK K++ ARDQ Sbjct: 123 DAAYAQYLIAASHYDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYATSAKKKLEGARDQ 182 Query: 191 LAGKEMAVGRYYMGKRDFTAAINRFKTVVTQYQTTRHVEEALFRLTEAYMAIGIA----- 245 LAGKEM VGRYYM KRD+TAAINRFKTVVT+YQTTRHVEEAL RLTEAYMAIGI Sbjct: 183 LAGKEMNVGRYYMEKRDYTAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQT 242 Query: 246 -----XHNFPDSRWYKDAYNLVKSGGLEPSENQGSWISRTFKKIGLG 287 HNFPDS+WY+DAYNLVKSGG+EPSEN+GS+IS+ FKK+GLG Sbjct: 243 AAAVLGHNFPDSKWYQDAYNLVKSGGVEPSENRGSYISKAFKKLGLG 289 >ref|YP_001207538.1| TPR repeat-containing protein [Bradyrhizobium sp. ORS 278] emb|CAL79321.1| Conserved hypothetical protein; Putative Lipoprotein with tetratricopeptide repeat (TPR) domain [Bradyrhizobium sp. ORS 278] Length = 297 Score = 491 bits (1264), Expect = e-137, Method: Compositional matrix adjust. Identities = 231/280 (82%), Positives = 250/280 (89%), Gaps = 10/280 (3%) Query: 18 ARTLRFAAGLIVLAMPLSGCGTGALWDKFMAKDDTFVDEPADKLYNEGLYMMNEKKDLKA 77 R +RFAA L +LA PL+GCGTG LWDKF+AKDDTFVDEPADKLYNEGLYM+NEKKD+K Sbjct: 18 GRRMRFAASLALLAFPLAGCGTGGLWDKFLAKDDTFVDEPADKLYNEGLYMLNEKKDMKG 77 Query: 78 ASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVTLHPGSPDASYAQY 137 A+KKFEEVDRQHPYSDWARKSLLMSAY+ YQAGDYD CIGSATRYVTLHPGSPDA+YAQY Sbjct: 78 ANKKFEEVDRQHPYSDWARKSLLMSAYASYQAGDYDGCIGSATRYVTLHPGSPDAAYAQY 137 Query: 138 LIAASHFDQIPDISRDQSRTEKAIAALEEVVRKYPTSEYATQAKSKIQAARDQLAGKEMA 197 LIAASH+DQIPDISRDQ RTEKAIAALEEVVRKYP SEYAT AK+K++ ARDQLAGKEM Sbjct: 138 LIAASHYDQIPDISRDQGRTEKAIAALEEVVRKYPNSEYATNAKAKMEGARDQLAGKEMD 197 Query: 198 VGRYYMGKRDFTAAINRFKTVVTQYQTTRHVEEALFRLTEAYMAIGIA----------XH 247 VGRYYM KRD+TAAINRFKTVVTQYQTTRHVEEALFRLTEAYM IGI H Sbjct: 198 VGRYYMQKRDYTAAINRFKTVVTQYQTTRHVEEALFRLTEAYMTIGIVGEAQTAAAVLGH 257 Query: 248 NFPDSRWYKDAYNLVKSGGLEPSENQGSWISRTFKKIGLG 287 NFPDS+WYKDAYNLVKSGG+EP EN+GS+ISR FKK+GLG Sbjct: 258 NFPDSKWYKDAYNLVKSGGVEPEENKGSYISRAFKKLGLG 297 >ref|NP_773234.1| hypothetical protein bll6594 [Bradyrhizobium japonicum USDA 110] dbj|BAC51859.1| bll6594 [Bradyrhizobium japonicum USDA 110] Length = 296 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 231/284 (81%), Positives = 254/284 (89%), Gaps = 10/284 (3%) Query: 14 LTKAARTLRFAAGLIVLAMPLSGCGTGALWDKFMAKDDTFVDEPADKLYNEGLYMMNEKK 73 ++ AR A I+LA+PL+GCGTGALWDKF AKDDTFV+EPADK+YNEGLY+MNEKK Sbjct: 13 ISPLARGGLQAVTFIMLALPLAGCGTGALWDKFTAKDDTFVEEPADKIYNEGLYLMNEKK 72 Query: 74 DLKAASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVTLHPGSPDAS 133 D+KAA+KKFEEVDRQHPYSDWARKSLLMSAY+ YQ GDYD CIG+ATRYVTLHPGSPDA+ Sbjct: 73 DMKAANKKFEEVDRQHPYSDWARKSLLMSAYASYQGGDYDGCIGAATRYVTLHPGSPDAA 132 Query: 134 YAQYLIAASHFDQIPDISRDQSRTEKAIAALEEVVRKYPTSEYATQAKSKIQAARDQLAG 193 YAQYLIAASH+DQIPDISRDQSRTEKAIA+LEEV+RKYPTSEYAT AK+KI+ ARDQLAG Sbjct: 133 YAQYLIAASHYDQIPDISRDQSRTEKAIASLEEVIRKYPTSEYATSAKAKIEGARDQLAG 192 Query: 194 KEMAVGRYYMGKRDFTAAINRFKTVVTQYQTTRHVEEALFRLTEAYMAIGIA-------- 245 KEM VGRYYM KRD+TAAINR+K VVTQYQTTRHVEEAL+RLTEAYMAIGI Sbjct: 193 KEMNVGRYYMQKRDYTAAINRYKAVVTQYQTTRHVEEALYRLTEAYMAIGIVGEAQTAAA 252 Query: 246 --XHNFPDSRWYKDAYNLVKSGGLEPSENQGSWISRTFKKIGLG 287 HNFPDSRWYKDAYNLVKSGGLEPSENQGSWIS+TFKK+GLG Sbjct: 253 VLGHNFPDSRWYKDAYNLVKSGGLEPSENQGSWISKTFKKMGLG 296 >ref|YP_570509.1| putative lipoprotein [Rhodopseudomonas palustris BisB5] gb|ABE40608.1| putative lipoprotein [Rhodopseudomonas palustris BisB5] Length = 301 Score = 484 bits (1247), Expect = e-135, Method: Compositional matrix adjust. Identities = 233/293 (79%), Positives = 255/293 (87%), Gaps = 11/293 (3%) Query: 6 RNSSDVSGLTKAARTLRFAAGLIVLAMPLSGCGTGALWDKFMAKD-DTFVDEPADKLYNE 64 RN G + R+L A L +LA+PL GCGTGA+WDKF+AKD D F DEPADKLYNE Sbjct: 9 RNRLVSRGSDRFWRSLPLMASLAMLALPLGGCGTGAIWDKFLAKDEDKFNDEPADKLYNE 68 Query: 65 GLYMMNEKKDLKAASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVT 124 GLY+MN++KDLKAASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVT Sbjct: 69 GLYLMNKEKDLKAASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVT 128 Query: 125 LHPGSPDASYAQYLIAASHFDQIPDISRDQSRTEKAIAALEEVVRKYPTSEYATQAKSKI 184 LHPGSPDA+YAQYLIAASH+DQIPD+SRDQ RTEKAIAALEEV+RKYPTSEYA QAK K+ Sbjct: 129 LHPGSPDAAYAQYLIAASHYDQIPDVSRDQGRTEKAIAALEEVIRKYPTSEYANQAKQKL 188 Query: 185 QAARDQLAGKEMAVGRYYMGKRDFTAAINRFKTVVTQYQTTRHVEEALFRLTEAYMAIGI 244 + ARDQLAGKEM VGRYYM KRD+TAAINRFKTVVT+YQTTRHVEEAL RLTEAYM IGI Sbjct: 189 EGARDQLAGKEMDVGRYYMQKRDYTAAINRFKTVVTRYQTTRHVEEALARLTEAYMTIGI 248 Query: 245 A----------XHNFPDSRWYKDAYNLVKSGGLEPSENQGSWISRTFKKIGLG 287 HNFPDSRWYKDAYNLVKSGGLEP+EN+GSWIS++FKK+GLG Sbjct: 249 VGEAQTAAAVLGHNFPDSRWYKDAYNLVKSGGLEPTENKGSWISKSFKKLGLG 301 >ref|YP_485625.1| putative lipoprotein [Rhodopseudomonas palustris HaA2] gb|ABD06714.1| putative lipoprotein [Rhodopseudomonas palustris HaA2] Length = 301 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 231/293 (78%), Positives = 255/293 (87%), Gaps = 11/293 (3%) Query: 6 RNSSDVSGLTKAARTLRFAAGLIVLAMPLSGCGTGALWDKFMAKD-DTFVDEPADKLYNE 64 RN + G + R+L A L++LA+PL GCGTGA+WDKF+AKD D F DEPADKLYNE Sbjct: 9 RNRLILRGSDRFWRSLPLVASLMLLALPLGGCGTGAIWDKFLAKDEDKFNDEPADKLYNE 68 Query: 65 GLYMMNEKKDLKAASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVT 124 GLY+MN++KDLK ASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVT Sbjct: 69 GLYLMNKEKDLKGASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVT 128 Query: 125 LHPGSPDASYAQYLIAASHFDQIPDISRDQSRTEKAIAALEEVVRKYPTSEYATQAKSKI 184 LHPGSPDA+YAQYLIAASH+DQIPDISRDQ RTEKAIAALEEV+RKYPTSEYA QAK K+ Sbjct: 129 LHPGSPDAAYAQYLIAASHYDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYANQAKQKL 188 Query: 185 QAARDQLAGKEMAVGRYYMGKRDFTAAINRFKTVVTQYQTTRHVEEALFRLTEAYMAIGI 244 + ARDQLAGKEM VGR+YM KRD+ AAINRFKTVVT+YQTTRHVEEAL RLTEAYMAIGI Sbjct: 189 EGARDQLAGKEMDVGRFYMEKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGI 248 Query: 245 A----------XHNFPDSRWYKDAYNLVKSGGLEPSENQGSWISRTFKKIGLG 287 HNFPDSRWYKDAY LVKSGGLEP+EN+GSWIS++FKK+GLG Sbjct: 249 VGEAQTAAAVLGHNFPDSRWYKDAYTLVKSGGLEPTENKGSWISKSFKKLGLG 301