BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0115.0195.p         (133 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAQ57573.1| hypothetical protein [Bradyrhizobium elkanii]          75   3e-12
ref|XP_002888040.1| hypothetical protein ARALYDRAFT_893280 [Arab...    37   0.75 
ref|YP_570722.1| hypothetical protein RPD_3598 [Rhodopseudomonas...    35   4.4  
ref|XP_657671.1| hypothetical protein AN0067.2 [Aspergillus nidu...    34   6.8  
gb|AAG40862.1| ribonucleotide reductase [Emericella nidulans]          34   7.3  

>emb|CAQ57573.1| hypothetical protein [Bradyrhizobium elkanii]
          Length = 108

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 55/95 (57%)

Query: 6   EVRPAPDAIQSYAKRAMAVQSEFSEKLIEANQHWFEQIQIESNEAWELFRRFNSTASVAE 65
           ++  A  A Q + KRA+  QSEF +K  EA  HW E+IQIE+ +  E F+  +ST+S  +
Sbjct: 12  DIGIAAGAFQDFTKRAIGAQSEFVKKYSEAYWHWQERIQIEATQLTEFFKHVSSTSSAPD 71

Query: 66  KITALQDWAKGVTARSANDATYAIETARSPGTIEL 100
           +I  LQ W KG   R   D  Y+IE A++   + L
Sbjct: 72  QIGILQGWMKGAKQRFTEDVVYSIEAAKALTNVGL 106


>ref|XP_002888040.1| hypothetical protein ARALYDRAFT_893280 [Arabidopsis lyrata subsp.
           lyrata]
 gb|EFH64299.1| hypothetical protein ARALYDRAFT_893280 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 386

 Score = 37.4 bits (85), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 14/47 (29%), Positives = 29/47 (61%)

Query: 20  RAMAVQSEFSEKLIEANQHWFEQIQIESNEAWELFRRFNSTASVAEK 66
           RA+ V   FS+K IE   + ++++  +  + WE+F++F +   ++EK
Sbjct: 202 RALHVIQGFSDKTIEEKVNLYKRLGFDVGDVWEMFKKFPTFLGLSEK 248


>ref|YP_570722.1| hypothetical protein RPD_3598 [Rhodopseudomonas palustris BisB5]
 gb|ABE40821.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 128

 Score = 34.7 bits (78), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 7/82 (8%)

Query: 11 PDAIQSYAKRAMAVQSEFSEK-------LIEANQHWFEQIQIESNEAWELFRRFNSTASV 63
          P+ +Q  A     V  +F E        + E    WFE+ +I ++ A E  RR    A+ 
Sbjct: 10 PNLLQPAAGTYAPVGVKFWENEETVLAGMKEFADGWFERRRIGTHAALETARRMGEAATP 69

Query: 64 AEKITALQDWAKGVTARSANDA 85
           + I   QDW  G  AR   D 
Sbjct: 70 LDSIREYQDWLGGAMARLLEDG 91


>ref|XP_657671.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
 gb|EAA65245.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
 tpe|CBF90266.1| TPA: Ribonucleotide reductase [Source:UniProtKB/TrEMBL;Acc:Q9HEW8]
           [Aspergillus nidulans FGSC A4]
          Length = 406

 Score = 34.3 bits (77), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 13/114 (11%)

Query: 1   MTGQSEVRPAPDAIQSYAKRAMAVQS-EFSEKLIEANQHWFEQIQIESNEAWELFRRFNS 59
           M      +PA +     +K A+ V++ E +E L++ N H F    I+ +E W+++++  +
Sbjct: 44  MVDVPATKPATEKPVEPSKAALDVKAIEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEA 103

Query: 60  TASVAEKITA---LQDWAKGVTARSANDATYAIE-----TARSPGTIELNLFAR 105
           +   AE+I     L DW      R   D  Y I       A S G +  NL  R
Sbjct: 104 SFWTAEEIDLSKDLHDW----NNRLNEDERYFISRVLAFFAASDGIVNENLLER 153


>gb|AAG40862.1| ribonucleotide reductase [Emericella nidulans]
          Length = 406

 Score = 34.3 bits (77), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 13/114 (11%)

Query: 1   MTGQSEVRPAPDAIQSYAKRAMAVQS-EFSEKLIEANQHWFEQIQIESNEAWELFRRFNS 59
           M      +PA +     +K A+ V++ E +E L++ N H F    I+ +E W+++++  +
Sbjct: 44  MVDVPATKPATEKPVEPSKAALDVKAIEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEA 103

Query: 60  TASVAEKITA---LQDWAKGVTARSANDATYAIE-----TARSPGTIELNLFAR 105
           +   AE+I     L DW      R   D  Y I       A S G +  NL  R
Sbjct: 104 SFWTAEEIDLSKDLHDW----NNRLNEDERYFISRVLAFFAASDGIVNENLLER 153