BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0115.0187.p         (74 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08102684.1| type I restriction-modification system (hsdR-...    40   0.16 
ref|ZP_08096341.1| type I restriction-modification system (hsdR-...    39   0.18 
ref|YP_580625.1| HsdR family type I site-specific deoxyribonucle...    37   0.76 
ref|YP_004567329.1| type I restriction-modification system restr...    36   1.9  
ref|YP_002876935.1| type I site-specific deoxyribonuclease HsdR ...    36   1.9  

>ref|ZP_08102684.1| type I restriction-modification system (hsdR-like) protein
          [Vibrio sinaloensis DSM 21326]
 gb|EGA70246.1| type I restriction-modification system (hsdR-like) protein
          [Vibrio sinaloensis DSM 21326]
          Length = 1099

 Score = 39.7 bits (91), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)

Query: 16 LLARLRAFLARRHEFDLLTAREIDEIAHELN-LPTSDL 52
          LL  LR +LA++++ D +T  EID+I H+LN LP SDL
Sbjct: 41 LLDDLRTYLAKQYQADDITEGEIDQIVHQLNRLPASDL 78


>ref|ZP_08096341.1| type I restriction-modification system (hsdR-like) protein
          [Vibrio brasiliensis LMG 20546]
 gb|EGA67694.1| type I restriction-modification system (hsdR-like) protein
          [Vibrio brasiliensis LMG 20546]
          Length = 1099

 Score = 39.3 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)

Query: 16 LLARLRAFLARRHEFDLLTAREIDEIAHELN-LPTSDL 52
          LL  LR +LA++++ D +T  EID+I H+LN LP SDL
Sbjct: 41 LLDDLRTYLAKQYQADDITEGEIDQIVHQLNRLPASDL 78


>ref|YP_580625.1| HsdR family type I site-specific deoxyribonuclease [Psychrobacter
          cryohalolentis K5]
 gb|ABE75141.1| type I site-specific deoxyribonuclease, HsdR family
          [Psychrobacter cryohalolentis K5]
          Length = 1060

 Score = 37.4 bits (85), Expect = 0.76,   Method: Composition-based stats.
 Identities = 20/34 (58%), Positives = 24/34 (70%), Gaps = 1/34 (2%)

Query: 20 LRAFLARRHEFDLLTAREIDEIAHELN-LPTSDL 52
          LR FLA R++ DL+T  EID I H+L  LP SDL
Sbjct: 42 LRQFLATRYKDDLITEYEIDSIIHKLEYLPASDL 75


>ref|YP_004567329.1| type I restriction-modification system restriction [Vibrio
          anguillarum 775]
 gb|AEH34287.1| Type I restriction-modification system restriction [Vibrio
          anguillarum 775]
          Length = 1260

 Score = 36.2 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/34 (52%), Positives = 26/34 (76%), Gaps = 1/34 (2%)

Query: 20 LRAFLARRHEFDLLTAREIDEIAHELN-LPTSDL 52
          LR FLA+R++ + +TA EI++I H+L  LP SDL
Sbjct: 42 LREFLAKRYQAEGITAYEIEQIIHKLEYLPASDL 75


>ref|YP_002876935.1| type I site-specific deoxyribonuclease HsdR family [Vibrio
          cholerae MJ-1236]
 ref|YP_002878245.1| type I site-specific deoxyribonuclease HsdR family [Vibrio
          cholerae MJ-1236]
 ref|YP_002878352.1| type I site-specific deoxyribonuclease HsdR family [Vibrio
          cholerae MJ-1236]
 ref|YP_002878774.1| type I site-specific deoxyribonuclease HsdR family [Vibrio
          cholerae MJ-1236]
 gb|ACQ59365.1| type I site-specific deoxyribonuclease HsdR family [Vibrio
          cholerae MJ-1236]
 gb|ACQ60675.1| type I site-specific deoxyribonuclease HsdR family [Vibrio
          cholerae MJ-1236]
 gb|ACQ60782.1| type I site-specific deoxyribonuclease HsdR family [Vibrio
          cholerae MJ-1236]
 gb|ACQ61204.1| type I site-specific deoxyribonuclease HsdR family [Vibrio
          cholerae MJ-1236]
          Length = 1260

 Score = 36.2 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/34 (52%), Positives = 26/34 (76%), Gaps = 1/34 (2%)

Query: 20 LRAFLARRHEFDLLTAREIDEIAHELN-LPTSDL 52
          LR FLA+R++ + +TA EI++I H+L  LP SDL
Sbjct: 42 LREFLAKRYQAEGITAYEIEQIIHKLEYLPASDL 75