BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0180.p (373 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07025514.1| ABC-2 type transporter [Afipia sp. 1NLS2] >gi... 625 e-177 ref|YP_001208917.1| putative ABC transporter permease [Bradyrhiz... 555 e-156 ref|YP_004676836.1| putative ABC transporter permease [Hyphomicr... 548 e-154 ref|YP_001243579.1| putative ABC transporter permease [Bradyrhiz... 527 e-147 ref|YP_001831950.1| ABC-2 type transporter [Beijerinckia indica ... 504 e-141 >ref|ZP_07025514.1| ABC-2 type transporter [Afipia sp. 1NLS2] gb|EFI52656.1| ABC-2 type transporter [Afipia sp. 1NLS2] Length = 375 Score = 625 bits (1613), Expect = e-177, Method: Compositional matrix adjust. Identities = 303/373 (81%), Positives = 339/373 (90%) Query: 1 MRLLSNIFWLGTKELRSFFSDWVLLGFVIYSFSLAVISQAQSNSQELYHASIAVVDEDHS 60 MR LSNIFWLGTKELRSFFSDWVLL FVIYSFSLAVISQAQS+SQELYHASI VVDEDHS Sbjct: 1 MRSLSNIFWLGTKELRSFFSDWVLLAFVIYSFSLAVISQAQSSSQELYHASIGVVDEDHS 60 Query: 61 ELSRRITHAFLMPYFKPPVAIREADVERLMNAGKYTFVMDIPPDFQQDLLAGRQPRLQIN 120 ELSRRITHAFLMPYFKPPV I EAD+E LMNAG+YTF++DIPP+FQ+D+LAGRQP LQIN Sbjct: 61 ELSRRITHAFLMPYFKPPVLIDEADIEPLMNAGRYTFIIDIPPNFQRDVLAGRQPALQIN 120 Query: 121 VDATAMVQAGLGSGYAEQIINTEIARFVSHAEHVPLSPVNLAVRIAFNPNVATSWFTGVM 180 VDATAMVQAGLGSGYA+QII+TEIA+F+S E PLSPVNLA+RIAFNPNV TSWFTGVM Sbjct: 121 VDATAMVQAGLGSGYAQQIISTEIAQFLSRREGTPLSPVNLAIRIAFNPNVTTSWFTGVM 180 Query: 181 GIISSVTMLAIILAGAALVREREHGTMDHLMVMPLSPLEIAISKIWANGFVIAVAVGLSL 240 II SV +LAIILAGAALVREREHGTMDHLMVMP++P EIA+SKIWANG VIAVAV L++ Sbjct: 181 SIIGSVNILAIILAGAALVREREHGTMDHLMVMPITPFEIAMSKIWANGLVIAVAVALAI 240 Query: 241 HLVVRTLLQVPIAGSIPLFMFGTTLYLFFATAIGLFLGTVVRSMPQLGLLYMLVAVPMNI 300 +LV+R LLQ+PIAGSIPLF+FGT LYLFFATA+GLFLGTV RSMPQLGLL+MLVA PMNI Sbjct: 241 YLVIRLLLQIPIAGSIPLFLFGTILYLFFATALGLFLGTVARSMPQLGLLFMLVATPMNI 300 Query: 301 LSGNATPLESMPHWLAIAMQASPSTHFVLFAQAILYRGAGLDVVWPQFVAVAAIASLFLM 360 LSG+ATPLESMP WLA MQASPSTHFV AQAILYRGAG D+VWP+F+A++ I LF+ Sbjct: 301 LSGSATPLESMPPWLATMMQASPSTHFVALAQAILYRGAGFDIVWPEFLAISGIGVLFVW 360 Query: 361 LSLIRFRASLSSA 373 L L+RFR+++ SA Sbjct: 361 LVLMRFRSAIGSA 373 >ref|YP_001208917.1| putative ABC transporter permease [Bradyrhizobium sp. ORS 278] emb|CAL80702.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. ORS 278] Length = 376 Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust. Identities = 272/373 (72%), Positives = 323/373 (86%) Query: 1 MRLLSNIFWLGTKELRSFFSDWVLLGFVIYSFSLAVISQAQSNSQELYHASIAVVDEDHS 60 +R L+NIFWLGTKELRS F D VL+G VIYSF++AVISQAQSNSQEL+ ASIAVVDED+S Sbjct: 2 LRSLANIFWLGTKELRSLFGDVVLIGLVIYSFTVAVISQAQSNSQELHRASIAVVDEDNS 61 Query: 61 ELSRRITHAFLMPYFKPPVAIREADVERLMNAGKYTFVMDIPPDFQQDLLAGRQPRLQIN 120 ELSRRI AFL PYF+ PV + + +VE MN+G++TFV+DIPP+FQ+D+LA R+P +Q+N Sbjct: 62 ELSRRIAAAFLPPYFQNPVFVTQREVEPRMNSGRFTFVLDIPPNFQRDMLARRKPSVQVN 121 Query: 121 VDATAMVQAGLGSGYAEQIINTEIARFVSHAEHVPLSPVNLAVRIAFNPNVATSWFTGVM 180 VDATAM+QAG+GSGYA QII+TE+ FV+ ++ SPVNL RIAFNPNV T+WF GVM Sbjct: 122 VDATAMIQAGIGSGYALQIISTEVGWFVARSDASVESPVNLVTRIAFNPNVTTAWFEGVM 181 Query: 181 GIISSVTMLAIILAGAALVREREHGTMDHLMVMPLSPLEIAISKIWANGFVIAVAVGLSL 240 GII+SVTMLAIILAGAALVREREHGTMDHL+VMPLSP EIAISKIWAN VIAVAVG++L Sbjct: 182 GIINSVTMLAIILAGAALVREREHGTMDHLLVMPLSPFEIAISKIWANALVIAVAVGVAL 241 Query: 241 HLVVRTLLQVPIAGSIPLFMFGTTLYLFFATAIGLFLGTVVRSMPQLGLLYMLVAVPMNI 300 ++VVR LQVPI GSIPLF+ GT LYLFFATA+GLFLGT+ RSMPQLGLLY+LVAVP+N+ Sbjct: 242 YVVVRWYLQVPIMGSIPLFLAGTALYLFFATAVGLFLGTIARSMPQLGLLYILVAVPINM 301 Query: 301 LSGNATPLESMPHWLAIAMQASPSTHFVLFAQAILYRGAGLDVVWPQFVAVAAIASLFLM 360 LSG TP+ES P WL+ M+ASPSTHFV FAQ+ILYRGAG+DVVWPQFVAV AI +L L Sbjct: 302 LSGGMTPVESQPVWLSTIMKASPSTHFVSFAQSILYRGAGIDVVWPQFVAVGAIGALVLA 361 Query: 361 LSLIRFRASLSSA 373 L+L RFRA+++SA Sbjct: 362 LTLRRFRAAIASA 374 >ref|YP_004676836.1| putative ABC transporter permease [Hyphomicrobium sp. MC1] emb|CCB66268.1| putative ABC-2 transporter, permease [Hyphomicrobium sp. MC1] Length = 375 Score = 548 bits (1412), Expect = e-154, Method: Compositional matrix adjust. Identities = 266/373 (71%), Positives = 312/373 (83%) Query: 1 MRLLSNIFWLGTKELRSFFSDWVLLGFVIYSFSLAVISQAQSNSQELYHASIAVVDEDHS 60 MR LSNI+WLG KELRSFF DWVLL V YSFS+AV++QAQSNSQEL++ASIA+VDEDHS Sbjct: 1 MRKLSNIYWLGLKELRSFFRDWVLLALVTYSFSIAVMAQAQSNSQELHNASIAIVDEDHS 60 Query: 61 ELSRRITHAFLMPYFKPPVAIREADVERLMNAGKYTFVMDIPPDFQQDLLAGRQPRLQIN 120 +LS RI AFL PYFK P + E DV+RLMN G+YTFV+DIPP F+ D+L GR+P LQ+N Sbjct: 61 DLSWRIAGAFLPPYFKTPQYVEERDVDRLMNTGRYTFVIDIPPRFESDVLGGRKPALQVN 120 Query: 121 VDATAMVQAGLGSGYAEQIINTEIARFVSHAEHVPLSPVNLAVRIAFNPNVATSWFTGVM 180 VDATAMVQAG+GS YAEQII+TEI +FVS E VP V L+VRIAFNPNV T+WFT VM Sbjct: 121 VDATAMVQAGIGSSYAEQIISTEINKFVSRIEDVPPPAVTLSVRIAFNPNVTTAWFTAVM 180 Query: 181 GIISSVTMLAIILAGAALVREREHGTMDHLMVMPLSPLEIAISKIWANGFVIAVAVGLSL 240 GIISSV MLAIILAGAA+VREREHGT+DHL+VMPL+P EIA+SK+WAN VI +AVGLSL Sbjct: 181 GIISSVNMLAIILAGAAVVREREHGTLDHLLVMPLTPFEIAMSKVWANAVVITIAVGLSL 240 Query: 241 HLVVRTLLQVPIAGSIPLFMFGTTLYLFFATAIGLFLGTVVRSMPQLGLLYMLVAVPMNI 300 VV+ LL +PIAGSIPLFM G +YLFF+TA+G+FL T+ R+MPQLGLLY+LVAVP+N+ Sbjct: 241 FFVVQRLLHIPIAGSIPLFMCGVMIYLFFSTAVGIFLATIARTMPQLGLLYILVAVPLNL 300 Query: 301 LSGNATPLESMPHWLAIAMQASPSTHFVLFAQAILYRGAGLDVVWPQFVAVAAIASLFLM 360 LSG TPLESMP +L MQ SPSTHFV FAQAILYRGAG DVVWP+FVAV AI +FL Sbjct: 301 LSGANTPLESMPPFLRTIMQVSPSTHFVAFAQAILYRGAGFDVVWPRFVAVGAIGGIFLF 360 Query: 361 LSLIRFRASLSSA 373 L+L+RFR ++ A Sbjct: 361 LALLRFRRVMAIA 373 >ref|YP_001243579.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gb|ABQ39673.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. BTAi1] Length = 376 Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust. Identities = 271/367 (73%), Positives = 319/367 (86%) Query: 1 MRLLSNIFWLGTKELRSFFSDWVLLGFVIYSFSLAVISQAQSNSQELYHASIAVVDEDHS 60 +R LSNIFWLGTKELRS F D VL+G VIYSF++AVISQAQS+SQEL+ ASIAVVDED+S Sbjct: 2 VRSLSNIFWLGTKELRSLFGDVVLIGLVIYSFTVAVISQAQSSSQELHRASIAVVDEDNS 61 Query: 61 ELSRRITHAFLMPYFKPPVAIREADVERLMNAGKYTFVMDIPPDFQQDLLAGRQPRLQIN 120 ELSRRI AFL PYF+ P++I + +VE LMN+G++TFV+DIPP+FQ+D+LAGR+P +Q+N Sbjct: 62 ELSRRIAAAFLPPYFQRPISITQREVEPLMNSGRFTFVLDIPPNFQRDVLAGRKPSVQVN 121 Query: 121 VDATAMVQAGLGSGYAEQIINTEIARFVSHAEHVPLSPVNLAVRIAFNPNVATSWFTGVM 180 VDATAM+QAG+GSGYA QII TE+A FV+ +E +PVNL RIAFNPN+ T+WF GVM Sbjct: 122 VDATAMIQAGIGSGYALQIITTEVAWFVARSEVPVQAPVNLVTRIAFNPNITTAWFEGVM 181 Query: 181 GIISSVTMLAIILAGAALVREREHGTMDHLMVMPLSPLEIAISKIWANGFVIAVAVGLSL 240 GII+SVTMLAIILAGAALVREREHGTMDHL+VMPLSP EIA+SKIWAN VIAVAV ++L Sbjct: 182 GIINSVTMLAIILAGAALVREREHGTMDHLLVMPLSPFEIAMSKIWANALVIAVAVAVAL 241 Query: 241 HLVVRTLLQVPIAGSIPLFMFGTTLYLFFATAIGLFLGTVVRSMPQLGLLYMLVAVPMNI 300 ++VVR LQVPI GS+PLF+ GT LYLFFATA+GLFLGT+ RSMPQLGLLY+LVAVPMN+ Sbjct: 242 YVVVRWYLQVPINGSVPLFLSGTVLYLFFATAVGLFLGTIARSMPQLGLLYILVAVPMNL 301 Query: 301 LSGNATPLESMPHWLAIAMQASPSTHFVLFAQAILYRGAGLDVVWPQFVAVAAIASLFLM 360 LSG TP+ES P WLA MQASPSTHFV FAQ+ILYRGAGLDVVWPQF+AVA I +L L Sbjct: 302 LSGAMTPVESQPVWLATIMQASPSTHFVSFAQSILYRGAGLDVVWPQFLAVAGIGALVLA 361 Query: 361 LSLIRFR 367 L+L RFR Sbjct: 362 LTLRRFR 368 >ref|YP_001831950.1| ABC-2 type transporter [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB94461.1| ABC-2 type transporter [Beijerinckia indica subsp. indica ATCC 9039] Length = 375 Score = 504 bits (1299), Expect = e-141, Method: Compositional matrix adjust. Identities = 241/368 (65%), Positives = 309/368 (83%), Gaps = 1/368 (0%) Query: 1 MRLLSNIFWLGTKELRSFFSDWVLLGFVIYSFSLAVISQAQSNSQELYHASIAVVDEDHS 60 MR L+NIFWLGTKELRSFF D+VL+G VI++FSLAV +QAQS SQELY+A+IA++DED S Sbjct: 1 MRSLANIFWLGTKELRSFFQDYVLVGLVIWAFSLAVYAQAQSRSQELYNAAIAIIDEDDS 60 Query: 61 ELSRRITHAFLMP-YFKPPVAIREADVERLMNAGKYTFVMDIPPDFQQDLLAGRQPRLQI 119 +LS I F++P YFK P I +DV RLM+ G+YTF++DIP F++D+LAGRQP +Q+ Sbjct: 61 QLSHFIREGFILPPYFKRPQTIALSDVNRLMDNGRYTFILDIPLHFERDILAGRQPSIQV 120 Query: 120 NVDATAMVQAGLGSGYAEQIINTEIARFVSHAEHVPLSPVNLAVRIAFNPNVATSWFTGV 179 NVDAT MVQAG+G+GY +QI+ +I F+SH+E P S V+L VR+AFNPNV TSWFT V Sbjct: 121 NVDATVMVQAGIGAGYIQQILMNQINDFLSHSEISPPSSVSLDVRVAFNPNVTTSWFTSV 180 Query: 180 MGIISSVTMLAIILAGAALVREREHGTMDHLMVMPLSPLEIAISKIWANGFVIAVAVGLS 239 MGII++VTMLAIIL+GAA++REREHGTM+HL+VMP++P EIA+SK+WANG VI +AVGLS Sbjct: 181 MGIINNVTMLAIILSGAAVIREREHGTMEHLLVMPVTPFEIAMSKVWANGLVITLAVGLS 240 Query: 240 LHLVVRTLLQVPIAGSIPLFMFGTTLYLFFATAIGLFLGTVVRSMPQLGLLYMLVAVPMN 299 L ++VR LL +P+AGS+PLF+ G +YLFFATA+G+FL T+ R+MPQLGLLY+LVA+PMN Sbjct: 241 LAVIVRGLLGIPVAGSVPLFLGGVVIYLFFATAVGIFLATIARTMPQLGLLYLLVAIPMN 300 Query: 300 ILSGNATPLESMPHWLAIAMQASPSTHFVLFAQAILYRGAGLDVVWPQFVAVAAIASLFL 359 ILSG+ TPLESMP L + M+ SPST+FV +AQAILYRGAGL+VVW +F+AVA + LF Sbjct: 301 ILSGSMTPLESMPWLLQMIMRFSPSTYFVSYAQAILYRGAGLEVVWQEFLAVALMGGLFF 360 Query: 360 MLSLIRFR 367 L+L+RFR Sbjct: 361 SLALLRFR 368