BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0115.0175.p         (150 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771285.1| hypothetical protein bll4645 [Bradyrhizobium ja...   194   4e-48
ref|YP_577197.1| hypothetical protein Nham_1930 [Nitrobacter ham...   179   1e-43
ref|ZP_01045916.1| hypothetical protein NB311A_11182 [Nitrobacte...   177   5e-43
ref|NP_774600.1| hypothetical protein bll7960 [Bradyrhizobium ja...   164   4e-39
ref|ZP_08630799.1| hypothetical protein CSIRO_3909 [Bradyrhizobi...   152   2e-35

>ref|NP_771285.1| hypothetical protein bll4645 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49910.1| bll4645 [Bradyrhizobium japonicum USDA 110]
          Length = 149

 Score =  194 bits (493), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 96/148 (64%), Positives = 113/148 (76%)

Query: 1   MTKVPHDAVVFVGDGRKALFLRNEGDAQSLNLKAEAVFEHQSPATRMQGTDRPGRLSKGP 60
           M ++PH A+VFVGDGRKALFLRNEGD +  NLK EAVFE ++P    QG+DRPGR+SKG 
Sbjct: 1   MIRIPHRAIVFVGDGRKALFLRNEGDEKFPNLKTEAVFEEENPPAHSQGSDRPGRISKGS 60

Query: 61  HSGQRSAVESPNWHDIEEHRFTKQVAIAAEQLLRSGSAKMFVIVAPPRTLGELRMALHAD 120
           HS QRSAVE  +WH+ EE RF +QVA AAE+LLRS  A   ++VAPPRTL ELR A HAD
Sbjct: 61  HSEQRSAVEMTDWHEFEEKRFARQVAAAAERLLRSEHATSLIVVAPPRTLAELRSAFHAD 120

Query: 121 VCRHVVAEIPKDLTKLPVWEIEKHLLEA 148
           V   +V E+ KDLTK PV EIEKHL +A
Sbjct: 121 VRCRIVGELDKDLTKHPVAEIEKHLRDA 148


>ref|YP_577197.1| hypothetical protein Nham_1930 [Nitrobacter hamburgensis X14]
 gb|ABE62737.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 151

 Score =  179 bits (455), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 86/146 (58%), Positives = 109/146 (74%)

Query: 1   MTKVPHDAVVFVGDGRKALFLRNEGDAQSLNLKAEAVFEHQSPATRMQGTDRPGRLSKGP 60
           M ++P DA+VFVGDGRKALFLRN GDA S+NLK E VFE  +P TR QG+DRPGR+ +  
Sbjct: 1   MFRIPRDALVFVGDGRKALFLRNVGDALSVNLKTEKVFEDTNPMTREQGSDRPGRVIESS 60

Query: 61  HSGQRSAVESPNWHDIEEHRFTKQVAIAAEQLLRSGSAKMFVIVAPPRTLGELRMALHAD 120
              ++SAVE  +WHDIEEH+F + VA A EQ++R+  A   ++VAPP+TLG+LR A H +
Sbjct: 61  PPNRKSAVEQTDWHDIEEHQFARTVAAAMEQMIRTSKATTLIVVAPPKTLGDLRTAFHPE 120

Query: 121 VCRHVVAEIPKDLTKLPVWEIEKHLL 146
           V   +VAEI KDLTK  V EIEKHL+
Sbjct: 121 VKACIVAEINKDLTKHSVGEIEKHLM 146


>ref|ZP_01045916.1| hypothetical protein NB311A_11182 [Nitrobacter sp. Nb-311A]
 gb|EAQ36000.1| hypothetical protein NB311A_11182 [Nitrobacter sp. Nb-311A]
          Length = 151

 Score =  177 bits (448), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 86/146 (58%), Positives = 107/146 (73%)

Query: 1   MTKVPHDAVVFVGDGRKALFLRNEGDAQSLNLKAEAVFEHQSPATRMQGTDRPGRLSKGP 60
           M K+P DA+VFVGDGRKALFLRN GDA S NLK E VFE  +P T  QG+DRPGR+ +  
Sbjct: 1   MFKIPRDALVFVGDGRKALFLRNAGDAISPNLKTEKVFEDTNPMTHEQGSDRPGRVIEAS 60

Query: 61  HSGQRSAVESPNWHDIEEHRFTKQVAIAAEQLLRSGSAKMFVIVAPPRTLGELRMALHAD 120
             G+RSAVE  +WHDIEEHRF + VA A E ++R+   K+ ++VAPP+TL +LR A H +
Sbjct: 61  LPGRRSAVEQTDWHDIEEHRFAQTVAAAMEHMVRTSKTKVLIVVAPPKTLADLRTAFHPE 120

Query: 121 VCRHVVAEIPKDLTKLPVWEIEKHLL 146
           +   +VAEI KDLTK  V EIEKHL+
Sbjct: 121 IKACIVAEIDKDLTKHSVAEIEKHLM 146


>ref|NP_774600.1| hypothetical protein bll7960 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53225.1| bll7960 [Bradyrhizobium japonicum USDA 110]
          Length = 159

 Score =  164 bits (415), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 81/145 (55%), Positives = 109/145 (75%), Gaps = 2/145 (1%)

Query: 1   MTKVPHDAVVFVGDGRKALFLRNEGDAQSLNLKAEAVFEHQSPATRMQGTDRPGRLSKGP 60
           +  +PH+A+VFVGDGRKALFLRN+G++   +LK E V E ++P TR QGTDRPGRL+   
Sbjct: 13  LLNIPHNALVFVGDGRKALFLRNDGNSLHPSLKMEQVHEDENPPTREQGTDRPGRLNSP- 71

Query: 61  HSGQRSAVESPNWHDIEEHRFTKQVAIAAEQLLRSGSAKMFVIVAPPRTLGELRMALHAD 120
             GQR+AVE+ +WH +E+HRF ++VA A +QL+R    K  V+VAPPRTL +LR ALHAD
Sbjct: 72  -MGQRTAVEAADWHHLEQHRFARRVAGAMQQLVRERDVKALVVVAPPRTLADLREALHAD 130

Query: 121 VCRHVVAEIPKDLTKLPVWEIEKHL 145
           V   ++AE+ KDLT+ P+ EI +HL
Sbjct: 131 VKARIIAEVHKDLTRHPIDEIAQHL 155


>ref|ZP_08630799.1| hypothetical protein CSIRO_3909 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP06516.1| hypothetical protein CSIRO_3909 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 152

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/145 (53%), Positives = 98/145 (67%), Gaps = 1/145 (0%)

Query: 1   MTKVPHDAVVFVGDGRKALFLRNEGDAQSLNLKAEAVFEHQSPATRMQGTDRPGRLSKGP 60
           M ++PH+  V VGDGRKALFLRNEG+  +L+LK E +  + +P TR QG+ RPGR  +  
Sbjct: 7   MIRIPHNTYVLVGDGRKALFLRNEGNGAALDLKTERILTNDNPPTREQGSGRPGRSFQSV 66

Query: 61  HSGQRSAVESPNWHDIEEHRFTKQVAIAAEQLLRSGSAKMFVIVAPPRTLGELRMALHAD 120
            SG RSAVE  +WH+I E RF K +A A E L R      FVIVAPPRTL +LR +L AD
Sbjct: 67  GSG-RSAVEQTDWHEIGEQRFAKTIADALEALARDREIPGFVIVAPPRTLADLRHSLGAD 125

Query: 121 VCRHVVAEIPKDLTKLPVWEIEKHL 145
               V+AEI KDLT  P+ +IE+HL
Sbjct: 126 TKSRVIAEIDKDLTGHPIKDIERHL 150