BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0158.p (312 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_764676.1| putative permease component of ABC transporter ... 378 e-103 ref|YP_004280664.1| oligopeptide ABC transporter transmembrane p... 368 e-100 ref|YP_002539658.1| ABC transporter membrane spanning protein (o... 365 4e-99 ref|YP_002542374.1| dipeptide ABC transporter [Agrobacterium rad... 364 8e-99 ref|YP_001238649.1| ABC transporter permease [Bradyrhizobium sp.... 358 9e-97 >ref|YP_764676.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] emb|CAK11876.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 326 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 192/325 (59%), Positives = 246/325 (75%), Gaps = 14/325 (4%) Query: 1 MLILEFLVKRIAQGILIVFITSLII--------------XVGGMAPADVVEKVATKMGLR 46 M IL FLV+R+AQG LIVF+ +L+I GGMAP ++E++A MGLR Sbjct: 1 MFILSFLVRRLAQGALIVFLVTLLIFTLLRVVPGDPVRLMAGGMAPEALIEQIAKDMGLR 60 Query: 47 DPIIVQYGRYMRGLVQGDLGQSYLRPRSGMIATGGQYVDPTKSDMAPVIDLILERLPFTL 106 DPI+VQ+GRYM G+V+GDLGQS++RP SG G + D T+ + A V+ LI + LP TL Sbjct: 61 DPILVQFGRYMSGVVRGDLGQSFVRPASGASTGGSSFGDSTRGERAEVLTLIADTLPMTL 120 Query: 107 QLGGMALVFALLLSFPIGIAGGLHQHRWQNALAFGMQSLFVSIPNFWLAIVLILFLSVKL 166 QLGG+A+ FAL+ SF +GI GGL RW + +AF + S+F+S+PNFWL IVL + LSVKL Sbjct: 121 QLGGLAIFFALVFSFLVGIPGGLAPGRWPDRVAFYISSIFISLPNFWLGIVLAMLLSVKL 180 Query: 167 KLLPALGYQGFSYVILPAFVLAVEIAPFIIRTLTTSLGEVMQAPFIDEARVRGMSRRRIV 226 LPA+GY GF+Y ILPA VLAVE+AP +IRTLT S+ VM PFI VRG+SR RI+ Sbjct: 181 GWLPAIGYSGFAYTILPAIVLAVELAPVLIRTLTGSVATVMMEPFIAVGNVRGLSRSRII 240 Query: 227 YSHALRNAAVPLVNLLGIQLSTLIGGVLVIEYIFDYPGLGNLTVVSVVGRDFPVIQGIAI 286 +HALRNA+VPL+NL+GIQ+S L+GGVLV+E+IFDYPGLG LT+ +V+ RDFP+IQGIAI Sbjct: 241 VAHALRNASVPLLNLIGIQISGLLGGVLVVEFIFDYPGLGLLTINAVLQRDFPLIQGIAI 300 Query: 287 TTSAVFVFINIIVDLVAYLIDPRVE 311 TSA+FVFINI VDL+A +IDPR+E Sbjct: 301 VTSAIFVFINIAVDLIATMIDPRLE 325 >ref|YP_004280664.1| oligopeptide ABC transporter transmembrane protein [Agrobacterium sp. H13-3] gb|ADY68286.1| oligopeptide ABC transporter membrane spanning protein [Agrobacterium sp. H13-3] Length = 326 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 185/325 (56%), Positives = 241/325 (74%), Gaps = 14/325 (4%) Query: 1 MLILEFLVKRIAQGILIVFITSLII--------------XVGGMAPADVVEKVATKMGLR 46 M + FL++R+ QG +I+F+ SL+I GGMAP ++EK+AT MGLR Sbjct: 1 MFAVNFLMRRLMQGAIIIFLVSLLIFTLLRVVPGDPVRLMAGGMAPEALIEKIATDMGLR 60 Query: 47 DPIIVQYGRYMRGLVQGDLGQSYLRPRSGMIATGGQYVDPTKSDMAPVIDLILERLPFTL 106 DPI+VQ+GRYM G+V+GDLGQS++RP +G G + D T+ + A V DLI + LP TL Sbjct: 61 DPILVQFGRYMGGVVRGDLGQSFVRPANGASTGGATFNDSTRGERAKVFDLIFDALPMTL 120 Query: 107 QLGGMALVFALLLSFPIGIAGGLHQHRWQNALAFGMQSLFVSIPNFWLAIVLILFLSVKL 166 QL + LV AL+ S IGIAGGL RW + LAF + S+F+S+PNFWL IVL L SVKL Sbjct: 121 QLAAVTLVIALIFSAIIGIAGGLAIGRWPDKLAFYISSIFISLPNFWLGIVLALLFSVKL 180 Query: 167 KLLPALGYQGFSYVILPAFVLAVEIAPFIIRTLTTSLGEVMQAPFIDEARVRGMSRRRIV 226 LPA+GYQGF+Y ILPA VLAVE++P +IRTL +S+ M P++ RVRG+SR RI+ Sbjct: 181 GWLPAIGYQGFAYTILPAIVLAVELSPVLIRTLVSSVSSQMMEPYVAVGRVRGLSRSRII 240 Query: 227 YSHALRNAAVPLVNLLGIQLSTLIGGVLVIEYIFDYPGLGNLTVVSVVGRDFPVIQGIAI 286 +HALRNA+VPL+NLLG+Q S+L+GGV+++EYIFDYPGLG LT+ +V+ RDFP+IQGIAI Sbjct: 241 SNHALRNASVPLLNLLGVQFSSLLGGVIIVEYIFDYPGLGLLTINAVLQRDFPLIQGIAI 300 Query: 287 TTSAVFVFINIIVDLVAYLIDPRVE 311 TSA+FV INI+VDLVA IDPR+E Sbjct: 301 VTSAIFVLINIVVDLVATTIDPRLE 325 >ref|YP_002539658.1| ABC transporter membrane spanning protein (oligopeptide) [Agrobacterium vitis S4] gb|ACM39953.1| ABC transporter membrane spanning protein (oligopeptide) [Agrobacterium vitis S4] Length = 326 Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 183/325 (56%), Positives = 238/325 (73%), Gaps = 14/325 (4%) Query: 1 MLILEFLVKRIAQGILIVFITSLII--------------XVGGMAPADVVEKVATKMGLR 46 M L FLV+R+ QG +I+F+ SL+I GGMAP ++EK+A MGLR Sbjct: 1 MFALNFLVRRLFQGAIIIFLVSLLIFTLLRVVPGDPVRMMAGGMAPEALIEKIAKDMGLR 60 Query: 47 DPIIVQYGRYMRGLVQGDLGQSYLRPRSGMIATGGQYVDPTKSDMAPVIDLILERLPFTL 106 DPI+VQ+GRYM G+VQGDLG+S++RP +G G + D T+ + A V LI + LP TL Sbjct: 61 DPILVQFGRYMSGVVQGDLGESFVRPANGAATGGSSFNDTTRGERAKVFTLIFDALPMTL 120 Query: 107 QLGGMALVFALLLSFPIGIAGGLHQHRWQNALAFGMQSLFVSIPNFWLAIVLILFLSVKL 166 QL + LV AL+ S +G+AGGL RW + LAF + S+F+S+PNFWL IVL L SVKL Sbjct: 121 QLAAVTLVIALVFSSIVGVAGGLAPGRWPDKLAFYISSIFISLPNFWLGIVLALLFSVKL 180 Query: 167 KLLPALGYQGFSYVILPAFVLAVEIAPFIIRTLTTSLGEVMQAPFIDEARVRGMSRRRIV 226 LPA+GYQGF+Y ILPA VLAVE+AP +IRTL +S+ M P++ RVRG+S RI+ Sbjct: 181 GWLPAIGYQGFAYTILPAIVLAVELAPVLIRTLVSSVSAQMMEPYVSVGRVRGLSNTRII 240 Query: 227 YSHALRNAAVPLVNLLGIQLSTLIGGVLVIEYIFDYPGLGNLTVVSVVGRDFPVIQGIAI 286 +HALRNA+VPL+NLLG+Q S+L+GGV+++EYIFDYPGLG LT+ +V+ RDFP+IQGIAI Sbjct: 241 ANHALRNASVPLLNLLGVQFSSLLGGVIIVEYIFDYPGLGLLTINAVLQRDFPLIQGIAI 300 Query: 287 TTSAVFVFINIIVDLVAYLIDPRVE 311 TSA+FV INI+VDLVA IDPR+E Sbjct: 301 VTSAIFVLINILVDLVATTIDPRLE 325 >ref|YP_002542374.1| dipeptide ABC transporter [Agrobacterium radiobacter K84] gb|ACM30777.1| dipeptide ABC transporter [Agrobacterium radiobacter K84] Length = 326 Score = 364 bits (935), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 188/325 (57%), Positives = 239/325 (73%), Gaps = 14/325 (4%) Query: 1 MLILEFLVKRIAQGILIVFITSLII--------------XVGGMAPADVVEKVATKMGLR 46 M L FLV+R+ QG+ I+F+ SL+I GGMAP +++EK+A MGLR Sbjct: 1 MFALSFLVRRLIQGVGIIFVVSLLIFTLLRVVPGDPVRLMAGGMAPEELIEKIAKDMGLR 60 Query: 47 DPIIVQYGRYMRGLVQGDLGQSYLRPRSGMIATGGQYVDPTKSDMAPVIDLILERLPFTL 106 DPIIVQ+GRYM G+V+GDLGQS++RP +G G + D T+ + A V+DLI++ LP TL Sbjct: 61 DPIIVQFGRYMGGVVRGDLGQSFVRPANGAATGGSSFNDTTRGERAKVLDLIVDALPMTL 120 Query: 107 QLGGMALVFALLLSFPIGIAGGLHQHRWQNALAFGMQSLFVSIPNFWLAIVLILFLSVKL 166 QL + LV AL+ S IGIAGGL RW + LAF + S+F+S+PNFWL IVL L LSVKL Sbjct: 121 QLAAVTLVIALVFSSIIGIAGGLAIGRWPDKLAFYISSIFISLPNFWLGIVLALLLSVKL 180 Query: 167 KLLPALGYQGFSYVILPAFVLAVEIAPFIIRTLTTSLGEVMQAPFIDEARVRGMSRRRIV 226 LPA+GY GFSY ILPA VLAVE++P +IRTL TS+ M + RVRG+SR RI+ Sbjct: 181 GWLPAIGYGGFSYTILPAIVLAVELSPVLIRTLATSVSTQMMESYALVGRVRGLSRTRII 240 Query: 227 YSHALRNAAVPLVNLLGIQLSTLIGGVLVIEYIFDYPGLGNLTVVSVVGRDFPVIQGIAI 286 +H LRNA+VPL+NLLG+Q S L+GGV+++EYIFDYPGLG LT+ +V+ RDFP+IQGIAI Sbjct: 241 ANHVLRNASVPLLNLLGVQFSGLLGGVIIVEYIFDYPGLGLLTINAVLQRDFPLIQGIAI 300 Query: 287 TTSAVFVFINIIVDLVAYLIDPRVE 311 TSA+FV INI VDLVA LIDPR+E Sbjct: 301 VTSAIFVLINIAVDLVATLIDPRLE 325 >ref|YP_001238649.1| ABC transporter permease [Bradyrhizobium sp. BTAi1] gb|ABQ34743.1| Putative ABC transporter, permease protein [Bradyrhizobium sp. BTAi1] Length = 326 Score = 358 bits (918), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 180/325 (55%), Positives = 236/325 (72%), Gaps = 14/325 (4%) Query: 1 MLILEFLVKRIAQGILIVFITSLII--------------XVGGMAPADVVEKVATKMGLR 46 M L FL++R+ QG++I+ + SL+I GGMAP ++EK+A MGLR Sbjct: 1 MFTLNFLIRRLTQGVVIIGLVSLLIFTLLRVVPGDPVRLMAGGMAPEALIEKIAKDMGLR 60 Query: 47 DPIIVQYGRYMRGLVQGDLGQSYLRPRSGMIATGGQYVDPTKSDMAPVIDLILERLPFTL 106 DPIIVQ+GRYM ++QGDLGQS++RP +G G + D T+ + A V+ LILE LP TL Sbjct: 61 DPIIVQFGRYMGSVLQGDLGQSFVRPANGAATGGANFNDTTRGERAKVLTLILEALPMTL 120 Query: 107 QLGGMALVFALLLSFPIGIAGGLHQHRWQNALAFGMQSLFVSIPNFWLAIVLILFLSVKL 166 QL + L ALL S +GIAGGL+ W + LAF + S+F+S+PNFWL IVL L LSVKL Sbjct: 121 QLAAVTLAIALLFSAVVGIAGGLNPSGWPDKLAFYISSVFISLPNFWLGIVLTLLLSVKL 180 Query: 167 KLLPALGYQGFSYVILPAFVLAVEIAPFIIRTLTTSLGEVMQAPFIDEARVRGMSRRRIV 226 LPA+GY GF+Y ILPA VLAVE++P +IRTL ++ M P++ RVRG+ R RI+ Sbjct: 181 GWLPAIGYHGFAYTILPAVVLAVEMSPVLIRTLVGAVSSQMTEPYVSVGRVRGLGRTRII 240 Query: 227 YSHALRNAAVPLVNLLGIQLSTLIGGVLVIEYIFDYPGLGNLTVVSVVGRDFPVIQGIAI 286 +H +RNA+VPL+NLLGIQ S+L+GGV+++EYIFDYPGLG LT+ +V+ RDFP+IQGIAI Sbjct: 241 ANHVMRNASVPLLNLLGIQFSSLLGGVIIVEYIFDYPGLGLLTINAVLQRDFPLIQGIAI 300 Query: 287 TTSAVFVFINIIVDLVAYLIDPRVE 311 TSA+FV INIIVDLVA IDPR++ Sbjct: 301 VTSAIFVVINIIVDLVATTIDPRLD 325