BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0151.p (343 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01442935.1| transcriptional regulator, AraC family protei... 217 2e-54 ref|YP_003693498.1| AraC family transcriptional regulator [Stark... 124 3e-26 ref|ZP_06483186.1| AraC family transcriptional regulator [Xantho... 114 3e-23 ref|ZP_08873673.1| helix-turn-helix domain-containing protein [V... 113 6e-23 ref|YP_001261491.1| AraC family transcriptional regulator [Sphin... 110 5e-22 >ref|ZP_01442935.1| transcriptional regulator, AraC family protein [Pelagibaca bermudensis HTCC2601] gb|EAU46822.1| transcriptional regulator, AraC family protein [Roseovarius sp. HTCC2601] Length = 288 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 115/272 (42%), Positives = 161/272 (59%) Query: 25 GLTQDWRTRIGRLDLELIGPDHAFARNWERVACIHDAAYVLVFPLTGCVAFSQDSRIGIA 84 GL+ +R+ +E++ +R+ + Y L+FP G ++F Q G Sbjct: 7 GLSLPPESRMALGPIEILRQGQGLSRHINGETPVAAPGYDLIFPAHGSLSFCQAGLTGEV 66 Query: 85 RPGEYVLLSELAFYELSSDKTARFLMLRIPAAELRGRLVSVEDHISRRFKPNEQMTHLLA 144 PG YVLL FYEL + +R+PAA L RLV+V+ H+ RF P+ QM L+A Sbjct: 67 GPGGYVLLRSDRFYELRAQGDLSQWRVRLPAAALEDRLVAVDTHVGARFAPHPQMAALVA 126 Query: 145 GMIRSVAELFVASPPPNPQALATEMISFVALTIGSEDRGAATDVRNARYHLRRRIVDFIE 204 + + ++F SP P P+ALA E+++ +AL IGSE R R R+RIV IE Sbjct: 127 RTLSATLQVFRQSPAPRPEALAGELVALIALMIGSEGEQEGNLGRTGRNRTRQRIVAHIE 186 Query: 205 SHLGDQSLSPKKIAASSRISLSYLYSLFNDNETTVSQFVQTKRLQRAYEILVADPKGRRT 264 HLGD L+P+ IA + +S SYLY+LF + TV+ F++T+RLQ AYE+L+AD +G Sbjct: 187 RHLGDPGLAPEGIARAMGVSRSYLYALFAEGNETVAGFIRTRRLQAAYEMLLADSRGGLA 246 Query: 265 VSEVAYEVGFKNVSHFSRCFSRHFKVAPRDVR 296 +SEVAY GFK+VSHFSR FSRHF+ PR VR Sbjct: 247 ISEVAYRTGFKSVSHFSRSFSRHFQATPRSVR 278 >ref|YP_003693498.1| AraC family transcriptional regulator [Starkeya novella DSM 506] gb|ADH88879.1| transcriptional regulator, AraC family [Starkeya novella DSM 506] Length = 319 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/240 (30%), Positives = 121/240 (50%), Gaps = 7/240 (2%) Query: 60 DAAYVLVFPLTGCVAFSQDSRIGIARPGEYVLLSELAFYELSSDKTARFLMLRIPAAELR 119 + +Y++ P V F QD R RPG +++ YE S A +L++PAA LR Sbjct: 76 EESYLITVPELAEVRFEQDGREVCCRPGAFLIERSHLPYEFSHRDPAALWVLKVPAAVLR 135 Query: 120 GRLVSVEDHISRRFKPNEQMTHLLAGMIRSVAELFVASPPPNPQALATEMISFVALTIGS 179 R+V E + +F + + + M+R P + +++ +A+ I + Sbjct: 136 TRIVRPERLATLQFDASRSVGAIFVDMLRLTGARIDEMDEPARALMGKQLVDLLAMAIEA 195 Query: 180 EDR---GAATDVRNARYHLRRRIVDFIESHLGDQSLSPKKIAASSRISLSYLYSLFNDNE 236 ++R G ++ VRNA H R FI S LGD LSP+ +A IS+ YL+ +F Sbjct: 196 DERVLAGHSSSVRNAHLH---RCEHFIRSRLGDVRLSPQMVAEGCGISVRYLHQIFEGEN 252 Query: 237 TTVSQFVQTKRLQRAYEILVADPKGRRTVSEVAYEVGFKNVSHFSRCFSRHFKVAPRDVR 296 TV +++ +RL A E ++ DP R+++SE+AYE GF + + FSR + F P + R Sbjct: 253 ITVGAYIRNQRLL-ACEAMLRDPNCRKSISEIAYEWGFGDQAQFSRNYRTRFGCTPSETR 311 >ref|ZP_06483186.1| AraC family transcriptional regulator [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 310 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 124/239 (51%), Gaps = 3/239 (1%) Query: 63 YVLVFPLTGCVAFSQDSRIGIARPGEYVLLSELAFYELSSDKTARFLMLRIPAAELRGRL 122 + + ++G V SQ S RPG+ + Y + + L + +P L GRL Sbjct: 73 FAIALLISGSVTLSQGSSQAFLRPGDMAIFDSSREYAIEVSRGFDALWMGVPRHRLEGRL 132 Query: 123 VSVEDHISRRFKPNEQMTHLLAGMIRSVAELFVASPPPNPQALATEMISFVALTIGSEDR 182 V + +++R + H+ + M+R+ + P +A ++ + L + S D Sbjct: 133 VVATEVLAQRIDGGCGVGHVASSMLRAALDEAHQLRPAEANRMANHLLDLLGLALASPDP 192 Query: 183 GA--ATDVRNARYHLRRRIVDFIESHLGDQSLSPKKIAASSRISLSYLYSLFNDNETTVS 240 A A+ R A LRR + FIE+HL D+ L+P+ IA + +S+ YL LF T+V+ Sbjct: 193 DAPQASQSRYASSTLRR-VQGFIENHLDDEMLTPEVIAQAHYVSVRYLNKLFEREGTSVA 251 Query: 241 QFVQTKRLQRAYEILVADPKGRRTVSEVAYEVGFKNVSHFSRCFSRHFKVAPRDVRQTP 299 ++++ +RL+R + + + R+ +S++AY GFKNVS F+R F HF +PR +R TP Sbjct: 252 RWMRLRRLERCRSDIESGSQVRQKISDIAYSHGFKNVSSFNRIFKSHFGCSPRALRDTP 310 >ref|ZP_08873673.1| helix-turn-helix domain-containing protein [Verminephrobacter sp. At4] Length = 332 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 81/248 (32%), Positives = 130/248 (52%), Gaps = 9/248 (3%) Query: 60 DAAYVLVFPLTGCVAFSQDSRIGIARPGEYVLLSELAFYELSSDKTARFLMLRIPAAELR 119 D ++ PL G V FSQ R PG+++L S Y+ + +L++P A L+ Sbjct: 84 DRQLLVTLPLHGEVGFSQLGRSTRCAPGQFLLESSEEPYDFGYRQPNAMWVLKLPVAALK 143 Query: 120 GRLVSVEDHISRRFKPNEQMTHLLAGMIRSVAELFVASPPPNPQAL-ATEMISFVALTIG 178 R+ +R++ + M L ++ V +AL AT++I +AL++ Sbjct: 144 ARIGEPGRFCARQYDNRQGMGRLFHDYLQWVTRHCDTDHGSAARALMATQLIDLLALSLR 203 Query: 179 SED---RGAATDVRNARYHLRRRIVDFIESHLGDQSLSPKKIAASSRISLSYLYSLFNDN 235 + A + VR+A HL R I + HL D +LSP++IA +S ISL YL+ LF D Sbjct: 204 QHPDALQSAHSAVRDA--HLAR-IEAHVRQHLSDPALSPERIAQASGISLRYLHQLFKDT 260 Query: 236 ETTVSQFVQTKRLQRAYEILVADPKGRRTVSEVAYEVGFKNVSHFSRCFSRHFKVAPRDV 295 +V+Q+V+ RLQ A+E L + GR TV+++AY GF + + FS F + F AP ++ Sbjct: 261 GQSVAQWVRELRLQSAHEAL-SRANGRTTVAQIAYGAGFGDQAQFSHAFRKKFGHAPSEM 319 Query: 296 RQTPVAAP 303 + P+ AP Sbjct: 320 LR-PLRAP 326 >ref|YP_001261491.1| AraC family transcriptional regulator [Sphingomonas wittichii RW1] gb|ABQ67353.1| transcriptional regulator, AraC family [Sphingomonas wittichii RW1] Length = 329 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 71/249 (28%), Positives = 121/249 (48%), Gaps = 1/249 (0%) Query: 50 RNWERVACIHDAAYVLVFPLTGCVAFSQDSRIGIARPGEYVLLSELAFYELSSDKTARFL 109 R R+A ++L L G A QDSR+ PG++ L YEL D + + Sbjct: 76 RTRSRIAGSTRDHFLLSLQLRGTGAICQDSRVAKLSPGDFALYDSTRPYELRFDDSFSQV 135 Query: 110 MLRIPAAELRGRLVSVEDHISRRFKPNEQMTHLLAGMIRSVAELFVASPPPNPQALATEM 169 +LR+P + GRL+ +RR + L + IR + E + L Sbjct: 136 VLRLPRETVTGRLIDSHMLTARRIDGQRGVGLLASSFIRQLHEQRADIDDLSLGRLQANA 195 Query: 170 ISFVALTIGSEDRGAATDVRNARYHLRRRIVDFIESHLGDQSLSPKKIAASSRISLSYLY 229 + +A + +E G + +R+R+ FI+ +LGD L+ + IA++ IS YL Sbjct: 196 VDLMATAL-AEQTGGQARTNEGQAIIRQRVCAFIDRNLGDHRLTCEGIASAHGISQRYLR 254 Query: 230 SLFNDNETTVSQFVQTKRLQRAYEILVADPKGRRTVSEVAYEVGFKNVSHFSRCFSRHFK 289 +F + TTVS ++ ++RL++A L +V+ + ++VGFK+ +HFSR F F Sbjct: 255 KIFESSSTTVSDWIWSRRLEQAKADLSDPLLAHVSVTAIGFDVGFKDAAHFSRAFRSRFG 314 Query: 290 VAPRDVRQT 298 ++PR+ R + Sbjct: 315 MSPREWRNS 323