BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0115.0138.p         (135 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004688357.1| 2,4-dienoyl-CoA reductase [NADPH] [Cupriavid...    57   8e-07
ref|ZP_01225272.1| 2,4-dienoyl-CoA reductase [marine gamma prote...    53   2e-05
ref|ZP_01892276.1| NADH:flavin oxidoreductase, Old Yellow Enzyme...    51   5e-05
ref|ZP_01897520.1| 2,4-dienoyl-CoA reductase [Moritella sp. PE36...    51   5e-05
gb|ADP96822.1| 2,4-dienoyl-CoA reductase [Marinobacter adhaerens...    51   6e-05

>ref|YP_004688357.1| 2,4-dienoyl-CoA reductase [NADPH] [Cupriavidus necator N-1]
 gb|AEI82319.1| 2,4-dienoyl-CoA reductase [NADPH] [Cupriavidus necator N-1]
          Length = 706

 Score = 57.4 bits (137), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 8/88 (9%)

Query: 1   MLAGRRHPKLLAPRGRGFTRLENQVFVHSVRSGVEGAENDLGERAARFAERS---VGVIT 57
           M+   R+P + +P   GFT+L+N+V + S+ +G+E  EN +   A  +AER+   VG+I 
Sbjct: 29  MIGHNRYPHMFSPLDLGFTKLKNRVLMGSMHTGLEETENGIERLATFYAERARGGVGMII 88

Query: 58  AGG--PN-AGATGHRVRPSIPEQAVQHR 82
            GG  PN  G  G ++  S PE+A +HR
Sbjct: 89  TGGFSPNDEGGIGSKL--STPEEAAEHR 114


>ref|ZP_01225272.1| 2,4-dienoyl-CoA reductase [marine gamma proteobacterium HTCC2207]
 gb|EAS46194.1| 2,4-dienoyl-CoA reductase [marine gamma proteobacterium HTCC2207]
          Length = 458

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 64/137 (46%), Gaps = 29/137 (21%)

Query: 6   RHPKLLAPRGRGFTRLENQVFVHSVRSGVEGAENDLGERAARFAERS---VGVITAGG-- 60
           ++PKL +P   GFT+L+N+  + S+ +G+E  E      AA FAER+   VG++  GG  
Sbjct: 6   KYPKLFSPLDLGFTQLKNRALMGSMHTGLEEVEGGFERLAAYFAERARGGVGMMITGGIS 65

Query: 61  PN-AGATGHRVRPSIPEQAVQHR---------------CPRGARRGPLPPNPAHEFARAS 104
           PN  G+ G ++  S PE A  HR               C +    GPL   P        
Sbjct: 66  PNEEGSMGSQM--STPEHAEGHRQVTEAVHAVDPDIKICMQILHAGPLAHTP------TM 117

Query: 105 VARPAVVSRIGGCRPKQ 121
           VA  AV SR+    P +
Sbjct: 118 VAPTAVASRLSRMTPNE 134


>ref|ZP_01892276.1| NADH:flavin oxidoreductase, Old Yellow Enzyme family protein
          [Marinobacter algicola DG893]
 gb|EDM49655.1| NADH:flavin oxidoreductase, Old Yellow Enzyme family protein
          [Marinobacter algicola DG893]
          Length = 688

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)

Query: 5  RRHPKLLAPRGRGFTRLENQVFVHSVRSGVEGAENDLGERAARFAERS---VGVITAGGP 61
          +R+P LL P   GFTRL N+  + S+ +G+E A+N     AA +AER+    G+I  GG 
Sbjct: 9  KRYPHLLEPLDLGFTRLRNRTLMGSMHTGLEEAKNGFDRLAAFYAERARGGAGLIVTGGI 68

Query: 62 NAGATG----HRVRPSIPEQAVQHRC 83
          +    G    H  + +  E+A +HR 
Sbjct: 69 SPNVEGAVFQHAAKMNTREEADKHRV 94


>ref|ZP_01897520.1| 2,4-dienoyl-CoA reductase [Moritella sp. PE36]
 gb|EDM68075.1| 2,4-dienoyl-CoA reductase [Moritella sp. PE36]
          Length = 680

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 5/67 (7%)

Query: 1  MLAGRRHPKLLAPRGRGFTRLENQVFVHSVRSGVEGAENDLGERAARFAERS---VGVIT 57
          M A   +P LL P   GFT+L+N+V + S+ +G+E   N     AA FAER+   VG+I 
Sbjct: 1  MSAQNNYPNLLTPLDLGFTQLKNRVLMGSMHTGLEEVSNGFTRMAAYFAERAAGGVGLIV 60

Query: 58 AG--GPN 62
           G  GPN
Sbjct: 61 TGGIGPN 67


>gb|ADP96822.1| 2,4-dienoyl-CoA reductase [Marinobacter adhaerens HP15]
          Length = 689

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 7/92 (7%)

Query: 6   RHPKLLAPRGRGFTRLENQVFVHSVRSGVEGAENDLGERAARFAERS---VGVITAGG-- 60
           ++P LL P   GFT+L N+  + S+ +G+E A+N     AA +AER+    G+I  GG  
Sbjct: 11  KYPNLLEPLDLGFTKLRNRTLMGSMHTGLEEAKNGFERLAAFYAERARGGAGLIVTGGIA 70

Query: 61  PNA--GATGHRVRPSIPEQAVQHRCPRGARRG 90
           PN   G   H  + +  E+  +HR    A  G
Sbjct: 71  PNVEGGVFQHAAKMTTEEEVEKHRVITDAVHG 102