BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0115.0137.p         (127 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770579.1| transcriptional regulator [Bradyrhizobium japon...   111   3e-23
ref|YP_485729.1| IclR family transcriptional regulator [Rhodopse...   111   4e-23
ref|YP_001992917.1| IclR family transcriptional regulator [Rhodo...   111   4e-23
ref|YP_004108263.1| IclR family transcriptional regulator [Rhodo...   111   4e-23
ref|YP_001239568.1| IclR family transcriptional regulator [Brady...   109   1e-22

>ref|NP_770579.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49204.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
           110]
          Length = 328

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/74 (68%), Positives = 62/74 (83%)

Query: 13  VIQVVSRAFDIVRCFEGRSIRLGNREIADRCGLPRSTVSRLTLTLTQIGQLIYLPQEQKY 72
           VIQVVSRAFD++RCFEG   RLGN EI++RCGLPRSTVSRLT TLT++GQL+YLP++QKY
Sbjct: 27  VIQVVSRAFDVLRCFEGHEARLGNLEISNRCGLPRSTVSRLTHTLTRMGQLVYLPRDQKY 86

Query: 73  ALGPHAAAAGAPLF 86
            +GP A A  A + 
Sbjct: 87  RIGPSAVAMSASMM 100


>ref|YP_485729.1| IclR family transcriptional regulator [Rhodopseudomonas palustris
          HaA2]
 gb|ABD06818.1| transcriptional regulator, IclR family [Rhodopseudomonas
          palustris HaA2]
          Length = 322

 Score =  111 bits (278), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/74 (68%), Positives = 62/74 (83%)

Query: 13 VIQVVSRAFDIVRCFEGRSIRLGNREIADRCGLPRSTVSRLTLTLTQIGQLIYLPQEQKY 72
          VIQVVSRAFD++RCFEG   RLGN EI++RCGLPRSTVSRLT TLT++GQL+YLP++QKY
Sbjct: 22 VIQVVSRAFDVLRCFEGAETRLGNLEISNRCGLPRSTVSRLTHTLTRMGQLVYLPRDQKY 81

Query: 73 ALGPHAAAAGAPLF 86
           +GP A A G  + 
Sbjct: 82 RIGPSAVAMGTAMM 95


>ref|YP_001992917.1| IclR family transcriptional regulator [Rhodopseudomonas palustris
          TIE-1]
 gb|ACF02442.1| transcriptional regulator, IclR family [Rhodopseudomonas
          palustris TIE-1]
          Length = 321

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 61/68 (89%)

Query: 13 VIQVVSRAFDIVRCFEGRSIRLGNREIADRCGLPRSTVSRLTLTLTQIGQLIYLPQEQKY 72
          VIQVVSRAFD++RCFEG  +RLGN EI++RCGLPRSTVSRLT TLT++GQL+YLP++QKY
Sbjct: 20 VIQVVSRAFDVLRCFEGHDVRLGNLEISNRCGLPRSTVSRLTHTLTRMGQLVYLPRDQKY 79

Query: 73 ALGPHAAA 80
           +GP A A
Sbjct: 80 RIGPSAVA 87


>ref|YP_004108263.1| IclR family transcriptional regulator [Rhodopseudomonas palustris
          DX-1]
 gb|ADU43530.1| transcriptional regulator, IclR family [Rhodopseudomonas
          palustris DX-1]
          Length = 321

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 61/68 (89%)

Query: 13 VIQVVSRAFDIVRCFEGRSIRLGNREIADRCGLPRSTVSRLTLTLTQIGQLIYLPQEQKY 72
          VIQVVSRAFD++RCFEG  +RLGN EI++RCGLPRSTVSRLT TLT++GQL+YLP++QKY
Sbjct: 20 VIQVVSRAFDVLRCFEGHDVRLGNLEISNRCGLPRSTVSRLTHTLTRMGQLVYLPRDQKY 79

Query: 73 ALGPHAAA 80
           +GP A A
Sbjct: 80 RIGPSAVA 87


>ref|YP_001239568.1| IclR family transcriptional regulator [Bradyrhizobium sp. BTAi1]
 gb|ABQ35662.1| transcriptional regulator, IclR family [Bradyrhizobium sp. BTAi1]
          Length = 328

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 60/68 (88%)

Query: 13 VIQVVSRAFDIVRCFEGRSIRLGNREIADRCGLPRSTVSRLTLTLTQIGQLIYLPQEQKY 72
          VIQVVSRAFD++RCFEG   RLGN EI++RCGLPRSTVSRLT TLT++GQL+YLP++QKY
Sbjct: 24 VIQVVSRAFDVLRCFEGHEARLGNLEISNRCGLPRSTVSRLTHTLTRMGQLVYLPRDQKY 83

Query: 73 ALGPHAAA 80
           +GP A A
Sbjct: 84 RIGPSAVA 91