BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0132.p (225 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_879291.1| GntR family transcriptional regulator [Bordetel... 211 5e-53 ref|NP_882820.1| GntR family transcriptional regulator [Bordetel... 211 7e-53 ref|NP_887020.1| GntR family transcriptional regulator [Bordetel... 211 8e-53 ref|YP_004813963.1| GntR family transcriptional regulator [Strep... 146 3e-33 ref|ZP_07309379.1| GntR-family regulatory protein [Streptomyces ... 145 6e-33 >ref|NP_879291.1| GntR family transcriptional regulator [Bordetella pertussis Tohama I] emb|CAE44759.1| putative GntR-family transcriptional regulator [Bordetella pertussis Tohama I] gb|AEE65914.1| GntR family transcriptional regulator [Bordetella pertussis CS] Length = 219 Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 107/206 (51%), Positives = 146/206 (70%) Query: 4 NLREQVLQRVRAEIISGQSLPGTMYSVPSLAASLGVSSTPVREALLELSRGGLVEPMRNR 63 NLRE V+ ++R++I+SG + PG +YSVPSLA LG+S+TPVREALLELSR GLVEP+RNR Sbjct: 14 NLRESVIAQLRSQIVSGAAAPGMIYSVPSLANELGISTTPVREALLELSRSGLVEPLRNR 73 Query: 64 GFKVVEPTLTELRNLFDMREVLELHAAVLVAANPPKDLTIVRGWADQIARAVETDDVQLY 123 GF+V TL +L N FD+R +LE A +A D + AD++A+AV+ DV Y Sbjct: 74 GFRVQAITLQDLENHFDVRVMLESGALATLARQGLTDTAPLVALADEVAQAVKDQDVGQY 133 Query: 124 LEADRNYHREFIAAAGNDLLTDTVMGLRDKMRLYGISSRAGHERQQASVPEHYRLIELAL 183 +E+DR++H ++ AGN LLT +M LR MRLYGI+S G RQ+ASV EHY +I+LA+ Sbjct: 134 IESDRSFHEALVSRAGNPLLTRMIMHLRADMRLYGINSEEGRVRQRASVEEHYEMIDLAV 193 Query: 184 AGETEALTALLRTHIRSWEPIFVDAL 209 + +A+ AL+ HI SW+P+F AL Sbjct: 194 KQQPDAIVALITRHIESWKPLFAAAL 219 >ref|NP_882820.1| GntR family transcriptional regulator [Bordetella parapertussis 12822] emb|CAE36053.1| putative GntR-family transcriptional regulator [Bordetella parapertussis] Length = 214 Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 108/206 (52%), Positives = 144/206 (69%) Query: 4 NLREQVLQRVRAEIISGQSLPGTMYSVPSLAASLGVSSTPVREALLELSRGGLVEPMRNR 63 NLRE V+ ++R+ I+SG + PG +YSVPSLA LG+S+TPVREALLELSR GLVEP+RNR Sbjct: 9 NLRESVIAQLRSRIVSGAAAPGMIYSVPSLANELGISTTPVREALLELSRSGLVEPLRNR 68 Query: 64 GFKVVEPTLTELRNLFDMREVLELHAAVLVAANPPKDLTIVRGWADQIARAVETDDVQLY 123 GF+V T+ +L N FD+R +LE A +A D + AD++A+AV+ DV Y Sbjct: 69 GFRVQAITVQDLENHFDVRVMLESGALATLARQGLTDTAPLVALADEVAQAVKDQDVGQY 128 Query: 124 LEADRNYHREFIAAAGNDLLTDTVMGLRDKMRLYGISSRAGHERQQASVPEHYRLIELAL 183 +E+DR +H +A AGN LLT +M LR MRLYGI+S G RQ+ASV EHY +I+LA+ Sbjct: 129 IESDRRFHEALVARAGNPLLTRMIMHLRADMRLYGINSEEGRVRQRASVDEHYEMIDLAV 188 Query: 184 AGETEALTALLRTHIRSWEPIFVDAL 209 + EA+ AL+ HI SW+P+F AL Sbjct: 189 KQQPEAIVALITRHIESWKPLFAAAL 214 >ref|NP_887020.1| GntR family transcriptional regulator [Bordetella bronchiseptica RB50] emb|CAE30969.1| putative GntR-family transcriptional regulator [Bordetella bronchiseptica RB50] Length = 211 Score = 211 bits (536), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 108/206 (52%), Positives = 144/206 (69%) Query: 4 NLREQVLQRVRAEIISGQSLPGTMYSVPSLAASLGVSSTPVREALLELSRGGLVEPMRNR 63 NLRE V+ ++R+ I+SG + PG +YSVPSLA LG+S+TPVREALLELSR GLVEP+RNR Sbjct: 6 NLRESVIAQLRSRIVSGAAAPGMIYSVPSLANELGISTTPVREALLELSRSGLVEPLRNR 65 Query: 64 GFKVVEPTLTELRNLFDMREVLELHAAVLVAANPPKDLTIVRGWADQIARAVETDDVQLY 123 GF+V T+ +L N FD+R +LE A +A D + AD++A+AV+ DV Y Sbjct: 66 GFRVQAITVQDLENHFDVRVMLESGALATLARQGLTDTAPLVALADEVAQAVKDQDVGQY 125 Query: 124 LEADRNYHREFIAAAGNDLLTDTVMGLRDKMRLYGISSRAGHERQQASVPEHYRLIELAL 183 +E+DR +H +A AGN LLT +M LR MRLYGI+S G RQ+ASV EHY +I+LA+ Sbjct: 126 IESDRRFHEALVARAGNPLLTRMIMHLRADMRLYGINSEEGRVRQRASVDEHYEMIDLAV 185 Query: 184 AGETEALTALLRTHIRSWEPIFVDAL 209 + EA+ AL+ HI SW+P+F AL Sbjct: 186 KQQPEAIVALITRHIESWKPLFAAAL 211 >ref|YP_004813963.1| GntR family transcriptional regulator [Streptomyces violaceusniger Tu 4113] gb|AEM83683.1| transcriptional regulator, GntR family [Streptomyces violaceusniger Tu 4113] Length = 228 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 123/199 (61%), Gaps = 1/199 (0%) Query: 1 MDQNLREQVLQRVRAEIISGQSLPGTMYSVPSLAASLGVSSTPVREALLELSRGGLVEPM 60 + LR+QV ++RA +I+G+ PGT+YS P LAA GVS+TPVREA+L+L+R GLVEP+ Sbjct: 12 VQHRLRDQVAHQLRAALIAGELRPGTVYSAPGLAADFGVSATPVREAMLDLAREGLVEPV 71 Query: 61 RNRGFKVVEPTLTELRNLFDMREVLELHAAVLVAANPPK-DLTIVRGWADQIARAVETDD 119 RN+GF++ E + +L ++R ++E+ V + L +R A +I A D Sbjct: 72 RNKGFRITEVSDRDLDQYTEIRALIEVPVVGRVTRTATRAQLEALRPIALEIVEAATAHD 131 Query: 120 VQLYLEADRNYHREFIAAAGNDLLTDTVMGLRDKMRLYGISSRAGHERQQASVPEHYRLI 179 + YLEADR +H E + +GND L +TV LR + RLYG++ H++ S EH L+ Sbjct: 132 LVGYLEADRRFHLELLGLSGNDRLVETVGDLRKRSRLYGLTWLDEHDQLLPSAEEHVELL 191 Query: 180 ELALAGETEALTALLRTHI 198 ++ LAG+ EA A + H+ Sbjct: 192 DVMLAGDAEAAEACMARHL 210 >ref|ZP_07309379.1| GntR-family regulatory protein [Streptomyces griseoflavus Tu4000] gb|EFL37748.1| GntR-family regulatory protein [Streptomyces griseoflavus Tu4000] Length = 235 Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 88/217 (40%), Positives = 127/217 (58%), Gaps = 3/217 (1%) Query: 4 NLREQVLQRVRAEIISGQSLPGTMYSVPSLAASLGVSSTPVREALLELSRGGLVEPMRNR 63 +LR+QV +RA +I+G+ PG +YS P+LAA LGVS+TPVREA+L+L+R GLVE +RN+ Sbjct: 14 HLRDQVADALRAALIAGELRPGVVYSAPTLAAELGVSATPVREAMLDLAREGLVEAVRNK 73 Query: 64 GFKVVEPTLTELRNLFDMREVLELHAAVLVAANPP-KDLTIVRGWADQIARAVETDDVQL 122 GF+V E T +L ++R ++E+ VAA + L +R A +I A + DV Sbjct: 74 GFRVTEMTEQDLDEFTEIRTLIEVPTVGRVAATAAVEQLESLRPLAQRIVTAAQEHDVLK 133 Query: 123 YLEADRNYHREFIAAAGNDLLTDTVMGLRDKMRLYGISSRAGHERQQASVPEHYRLIELA 182 YLEAD +H E +A AGN L + V LR + RL+G+ S R AS EH L++L Sbjct: 134 YLEADHRFHLELLALAGNRHLVEVVSDLRKRSRLFGLGSLNETGRLVASAQEHVELLDLM 193 Query: 183 LAGETEALTALLRTHIRSWEPIFVDALLRSKEHAREP 219 +AG +R H+ ++ D R+ REP Sbjct: 194 VAGRIREAEECMRRHLAHVRSLWADG--RADAAEREP 228