BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0129.p (287 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_882819.1| short-chain fatty acids transporter [Bordetella... 400 e-109 ref|NP_879293.1| short-chain fatty acids transporter [Bordetella... 400 e-109 ref|NP_887019.1| short-chain fatty acids transporter [Bordetella... 399 e-109 ref|ZP_02885570.1| short chain fatty acid transporter [Burkholde... 332 3e-89 ref|YP_001925001.1| short chain fatty acid transporter [Methylob... 321 7e-86 >ref|NP_882819.1| short-chain fatty acids transporter [Bordetella parapertussis 12822] emb|CAE36052.1| short-chain fatty acids transporter [Bordetella parapertussis] Length = 487 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 200/287 (69%), Positives = 239/287 (83%) Query: 1 VIGFSETILTWQNMVTVVMVTVVSAAICYFTTPAPDRARTAEDLSVALGDDRIEARKPAR 60 VIGFSETILTWQN+V V++VTVVS +CYFT P+P+R+ TA+DL V L + +A + R Sbjct: 199 VIGFSETILTWQNLVVVILVTVVSGLVCYFTAPSPERSLTAQDLGVDLTEPEAQAAQRQR 258 Query: 61 PGDWLEFSPLLTILIALLAAGWLWQTFQSGNPLITLSGLNTYNFVFLILGIVLHWRPRSL 120 PGD+LEFSP LT+ + LA+GWL+ TF+SGNP IT+S LNTYNFVFL+LG++LHWRPRS Sbjct: 259 PGDYLEFSPWLTVAVVGLASGWLYLTFRSGNPFITMSQLNTYNFVFLLLGLLLHWRPRSF 318 Query: 121 IESFSKAMPSVSGVLLQFPFYAGIAQILTKVPNSSGTTLSDTIAHWFVGASSNSTVFSFL 180 +ESF +AMPS+ GV+LQFPFY GI +LTKV N G TLSD IAHWFV + +S+VFS L Sbjct: 319 LESFGRAMPSIGGVMLQFPFYGGIGYVLTKVANVQGHTLSDAIAHWFVSLAHDSSVFSIL 378 Query: 181 VGIYSALLGFFVPSAGGKWIIEAPYIMKAANDIGAHLGWTVMVYNIAETLPNFINPFWML 240 V IYSA LGFF+PSAGGKW+IEAPYIM AAN I AHLGWTVMVYNIAETLPNFINPFWML Sbjct: 379 VSIYSAFLGFFIPSAGGKWVIEAPYIMDAANQIQAHLGWTVMVYNIAETLPNFINPFWML 438 Query: 241 PLLGILGLKSKDLIGYTSVQFFIHFPIVMLLAAILMATFTYHPPILP 287 PLLGIL LKSKDL+GYT++QF +HFPIV+ AILM TF+Y PP++P Sbjct: 439 PLLGILRLKSKDLVGYTAMQFLVHFPIVVAAGAILMHTFSYVPPVIP 485 >ref|NP_879293.1| short-chain fatty acids transporter [Bordetella pertussis Tohama I] emb|CAE44761.1| short-chain fatty acids transporter [Bordetella pertussis Tohama I] gb|AEE65916.1| short-chain fatty acids transporter [Bordetella pertussis CS] Length = 487 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 200/287 (69%), Positives = 239/287 (83%) Query: 1 VIGFSETILTWQNMVTVVMVTVVSAAICYFTTPAPDRARTAEDLSVALGDDRIEARKPAR 60 VIGFSETILTWQN+V V++VTVVS +CYFT P+P+R+ TA+DL V L + +A + R Sbjct: 199 VIGFSETILTWQNLVVVILVTVVSGLVCYFTAPSPERSLTAQDLGVDLTEPEAQAAQRQR 258 Query: 61 PGDWLEFSPLLTILIALLAAGWLWQTFQSGNPLITLSGLNTYNFVFLILGIVLHWRPRSL 120 PGD+LEFSP LT+ + LA+GWL+ TF+SGNP IT+S LNTYNFVFL+LG++LHWRPRS Sbjct: 259 PGDYLEFSPWLTVAVVGLASGWLYLTFRSGNPFITMSQLNTYNFVFLLLGLLLHWRPRSF 318 Query: 121 IESFSKAMPSVSGVLLQFPFYAGIAQILTKVPNSSGTTLSDTIAHWFVGASSNSTVFSFL 180 +ESF +AMPS+ GV+LQFPFY GI +LTKV N G TLSD IAHWFV + +S+VFS L Sbjct: 319 LESFGRAMPSIGGVMLQFPFYGGIGYVLTKVANVQGHTLSDAIAHWFVSLAHDSSVFSIL 378 Query: 181 VGIYSALLGFFVPSAGGKWIIEAPYIMKAANDIGAHLGWTVMVYNIAETLPNFINPFWML 240 V IYSA LGFF+PSAGGKW+IEAPYIM AAN I AHLGWTVMVYNIAETLPNFINPFWML Sbjct: 379 VSIYSAFLGFFIPSAGGKWVIEAPYIMDAANQIQAHLGWTVMVYNIAETLPNFINPFWML 438 Query: 241 PLLGILGLKSKDLIGYTSVQFFIHFPIVMLLAAILMATFTYHPPILP 287 PLLGIL LKSKDL+GYT++QF +HFPIV+ AILM TF+Y PP++P Sbjct: 439 PLLGILRLKSKDLVGYTAMQFLVHFPIVVAAGAILMHTFSYVPPVIP 485 >ref|NP_887019.1| short-chain fatty acids transporter [Bordetella bronchiseptica RB50] emb|CAE30968.1| short-chain fatty acids transporter [Bordetella bronchiseptica RB50] Length = 487 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 202/287 (70%), Positives = 240/287 (83%) Query: 1 VIGFSETILTWQNMVTVVMVTVVSAAICYFTTPAPDRARTAEDLSVALGDDRIEARKPAR 60 VIGFSETILTWQN+V VV+VTVVS +CYFT P+P+R+ TA+DL V L + +A + R Sbjct: 199 VIGFSETILTWQNLVVVVLVTVVSGLVCYFTAPSPERSLTAQDLGVDLTEPEAQAAQRQR 258 Query: 61 PGDWLEFSPLLTILIALLAAGWLWQTFQSGNPLITLSGLNTYNFVFLILGIVLHWRPRSL 120 PGD+LEFSP LT+ + LA+GWL+ TF+SGNP IT+S LNTYNFVFL+LG++LHWRPRS Sbjct: 259 PGDYLEFSPWLTVAVVGLASGWLYLTFRSGNPFITMSQLNTYNFVFLLLGLLLHWRPRSF 318 Query: 121 IESFSKAMPSVSGVLLQFPFYAGIAQILTKVPNSSGTTLSDTIAHWFVGASSNSTVFSFL 180 +ESF +AMPS+SGV+LQFPFY GI +LTKV N G TLSD IAHWFV + +S+VFS L Sbjct: 319 LESFGRAMPSISGVMLQFPFYGGIGYVLTKVANVQGHTLSDAIAHWFVSLAHDSSVFSIL 378 Query: 181 VGIYSALLGFFVPSAGGKWIIEAPYIMKAANDIGAHLGWTVMVYNIAETLPNFINPFWML 240 V IYSA LGFF+PSAGGKW+IEAPYIM AAN I AHLGWTVMVYNIAETLPNFINPFWML Sbjct: 379 VSIYSAFLGFFIPSAGGKWVIEAPYIMDAANQIQAHLGWTVMVYNIAETLPNFINPFWML 438 Query: 241 PLLGILGLKSKDLIGYTSVQFFIHFPIVMLLAAILMATFTYHPPILP 287 PLLGIL LKSKDL+GYT++QF +HFPIV+ AILM TF+Y PP++P Sbjct: 439 PLLGILRLKSKDLVGYTAMQFLVHFPIVVAAGAILMHTFSYVPPVIP 485 >ref|ZP_02885570.1| short chain fatty acid transporter [Burkholderia graminis C4D1M] gb|EDT08726.1| short chain fatty acid transporter [Burkholderia graminis C4D1M] Length = 483 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 154/287 (53%), Positives = 213/287 (74%), Gaps = 1/287 (0%) Query: 1 VIGFSETILTWQNMVTVVMVTVVSAAICYFTTPAPDRARTAEDLSVALGDDRIEARKPAR 60 VI FSETI Q+++ V +TVVS I Y + P +RA+TA+ L ++L + +E P+R Sbjct: 198 VIPFSETIFLPQSLLIVAALTVVSLLIAYLSAPGTERAKTAQHLGISLNEAELEVAAPSR 257 Query: 61 PGDWLEFSPLLTILIALLAAGWLWQTFQSGNPLITLSGLNTYNFVFLILGIVLHWRPRSL 120 PGDWLE+SPL+TILI L + W W F + NP++ +S LNTYNFVFL+ G++L+WRPR Sbjct: 258 PGDWLEYSPLITILIVALGSVWAWHEFTAKNPVLAISNLNTYNFVFLLAGMLLNWRPRRF 317 Query: 121 IESFSKAMPSVSGVLLQFPFYAGIAQILTKVPNSSGTTLSDTIAHWFVGASSNSTVFSFL 180 + + +K++PSV+GVL+QFP Y GIA +LTK SG L+D ++H+FV SS+++ F L Sbjct: 318 LNAVAKSVPSVAGVLIQFPLYGGIAYMLTKASAPSGLPLADHLSHFFVAVSSHAS-FPAL 376 Query: 181 VGIYSALLGFFVPSAGGKWIIEAPYIMKAANDIGAHLGWTVMVYNIAETLPNFINPFWML 240 +GIYSA+LGFFVPS GGKWI EAPY++ AA ++ HLGW V VYN AE LPN INPFWML Sbjct: 377 MGIYSAVLGFFVPSGGGKWINEAPYVIAAARELQVHLGWAVTVYNAAEALPNLINPFWML 436 Query: 241 PLLGILGLKSKDLIGYTSVQFFIHFPIVMLLAAILMATFTYHPPILP 287 PLLG+LGL+++D++G+T QF +H P+V+ + IL T T+HPP++P Sbjct: 437 PLLGVLGLRARDVVGFTFTQFIVHLPLVIFMLWILAGTLTFHPPVMP 483 >ref|YP_001925001.1| short chain fatty acid transporter [Methylobacterium populi BJ001] gb|ACB80466.1| short chain fatty acid transporter [Methylobacterium populi BJ001] Length = 479 Score = 321 bits (823), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 152/287 (52%), Positives = 206/287 (71%), Gaps = 1/287 (0%) Query: 1 VIGFSETILTWQNMVTVVMVTVVSAAICYFTTPAPDRARTAEDLSVALGDDRIEARKPAR 60 VI FSETI WQ+++ ++ V+SA I + P D A TA+DL V + P + Sbjct: 193 VIPFSETIFLWQSILIAAILVVMSALIALASAPGRDTAVTAQDLGVDVAKAEDSVAPPKQ 252 Query: 61 PGDWLEFSPLLTILIALLAAGWLWQTFQSGNPLITLSGLNTYNFVFLILGIVLHWRPRSL 120 PG+WLE +P+LTILI LLAAGWL Q F + +I +S LNTYNF+FL+ G VLHWRP+ Sbjct: 253 PGEWLEHAPVLTILIGLLAAGWLIQEFARQDWMIAISNLNTYNFLFLMAGFVLHWRPKRF 312 Query: 121 IESFSKAMPSVSGVLLQFPFYAGIAQILTKVPNSSGTTLSDTIAHWFVGASSNSTVFSFL 180 + + +KA+P+ +G+L+QFPFYA IA ILT N++G +LSD IAH FV ++ + F Sbjct: 313 LNALAKAVPATAGILIQFPFYAAIAAILTGAKNAAGHSLSDVIAHAFVALNTQGS-FPLA 371 Query: 181 VGIYSALLGFFVPSAGGKWIIEAPYIMKAANDIGAHLGWTVMVYNIAETLPNFINPFWML 240 +G+YSALLGFF+PS GGKW++EAPY+M+AAN++ HLGW V VYN AE LPN INPF+ML Sbjct: 372 MGVYSALLGFFIPSGGGKWLLEAPYVMQAANELKVHLGWAVQVYNAAEALPNLINPFFML 431 Query: 241 PLLGILGLKSKDLIGYTSVQFFIHFPIVMLLAAILMATFTYHPPILP 287 PLLGILGLK++D++G++ +Q +H P+V+ L L T YHPP+LP Sbjct: 432 PLLGILGLKARDIVGFSFLQLIVHLPVVLFLLWALAFTLEYHPPVLP 478