BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0123.p (349 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_945990.1| hypothetical protein RPA0637 [Rhodopseudomonas ... 338 9e-91 ref|YP_001989739.1| hypothetical protein Rpal_0704 [Rhodopseudom... 338 1e-90 ref|NP_770331.1| hypothetical protein bll3691 [Bradyrhizobium ja... 325 5e-87 ref|YP_001239178.1| hypothetical protein BBta_3157 [Bradyrhizobi... 319 5e-85 ref|YP_001206823.1| hypothetical protein BRADO4894 [Bradyrhizobi... 312 5e-83 >ref|NP_945990.1| hypothetical protein RPA0637 [Rhodopseudomonas palustris CGA009] emb|CAE26081.1| hypothetical protein RPA0637 [Rhodopseudomonas palustris CGA009] Length = 442 Score = 338 bits (866), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 174/330 (52%), Positives = 220/330 (66%), Gaps = 6/330 (1%) Query: 15 NFDQLLAANGIRMSAAQRRRLAWLSERLGPAVVHQAGSVPARDHGVIILVEPPSGPAAEM 74 +LL A+G+R+ +QRRRL WL++R+GP + + G P RD G++I+ EP SG AE+ Sbjct: 9 KLTELLQASGLRLGTSQRRRLDWLADRVGPVRLQRPGEAPDRDAGLVIVTEPMSGAGAEL 68 Query: 75 LYRSLRADCAVVVPFGENPAFDFLKSKLTDFGTIGP-SFDGPHEMWWGGL-NWRPIAPEQ 132 +L DC VV+PFGENP FDFLKSKLT+FGT+GP +GPHEMWWGG+ + + + Sbjct: 69 FCNALPGDCVVVLPFGENPDFDFLKSKLTEFGTVGPCGAEGPHEMWWGGVGDAETLVADA 128 Query: 133 GSRSEASLRVVSCYPRACGDDRARALRDKLAEFRIACDIAPIDTADGEHMRAADKSGFML 192 G A R+VSCY C DD LR F +A I P+ + + + A +K+ F+L Sbjct: 129 GE--TARPRIVSCYQHGC-DDLVWPLRQAAESFGLAAHIGPLMSECDDRVLAYEKAEFIL 185 Query: 193 RMWEQHREPLLFIEADAVLSEPPLLPSHLDCDVALHKWNRWEMSARTLYLGRSPAAETVL 252 + WE EPLL+IEA A+L PPLLP+ LDCDVALH+WNRWE+SARTLY GRS AA+ +L Sbjct: 186 QAWELFPEPLLYIEAGALLQAPPLLPAQLDCDVALHRWNRWELSARTLYFGRSDAAKALL 245 Query: 253 RNWHHIASAHPAVWEGYSLDQAWSLTSSQMALDTVWLPRSYHAPAEDAGTPRHTTIVHNL 312 W +A AHPAVW+GY LDQAWSL S+ ALDTVWLPRSYH D P IVH+L Sbjct: 246 LGWRRLAKAHPAVWDGYLLDQAWSLALSRSALDTVWLPRSYHTLHGDPAQP-SAVIVHDL 304 Query: 313 PTDSSDLGPDAEFGVAMRAARRASRXHDRD 342 P S+DLGPD F +R ARRA R RD Sbjct: 305 PGTSADLGPDPGFASLVRTARRAGRTGGRD 334 >ref|YP_001989739.1| hypothetical protein Rpal_0704 [Rhodopseudomonas palustris TIE-1] gb|ACE99263.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 442 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 175/330 (53%), Positives = 221/330 (66%), Gaps = 6/330 (1%) Query: 15 NFDQLLAANGIRMSAAQRRRLAWLSERLGPAVVHQAGSVPARDHGVIILVEPPSGPAAEM 74 +LL A+G+R+ +QRRRL WL++R+GPA + + G P RD G++I+ EP SG AE+ Sbjct: 9 KLTELLQASGLRLGTSQRRRLDWLADRVGPARLQRPGEAPHRDAGLVIVTEPMSGAGAEL 68 Query: 75 LYRSLRADCAVVVPFGENPAFDFLKSKLTDFGTIGP-SFDGPHEMWWGGL-NWRPIAPEQ 132 +L DC VV+PFGENP FDFLKSKLT+FGT+GP +GPHEMWWGG+ + + + Sbjct: 69 FCNALPRDCMVVLPFGENPDFDFLKSKLTEFGTVGPCGAEGPHEMWWGGVGDAETLVADA 128 Query: 133 GSRSEASLRVVSCYPRACGDDRARALRDKLAEFRIACDIAPIDTADGEHMRAADKSGFML 192 G A R+VSCY C DD LR F +A I P+ + + + A +K+ F+L Sbjct: 129 GE--TARPRIVSCYQHGC-DDLVWPLRQAAESFGLAAHIGPLMSECDDRVLAYEKAEFIL 185 Query: 193 RMWEQHREPLLFIEADAVLSEPPLLPSHLDCDVALHKWNRWEMSARTLYLGRSPAAETVL 252 + WE EPLL+IEA A+L PPLLP+ LDCDVALH+WNRWE+SARTLY GRS AA+ +L Sbjct: 186 QAWELFPEPLLYIEAGALLQAPPLLPAQLDCDVALHRWNRWELSARTLYFGRSDAAKALL 245 Query: 253 RNWHHIASAHPAVWEGYSLDQAWSLTSSQMALDTVWLPRSYHAPAEDAGTPRHTTIVHNL 312 W +A AHPAVW+GY LDQAWSL S+ ALDTVWLPRSYH D P IVH+L Sbjct: 246 LGWRRLAKAHPAVWDGYLLDQAWSLALSRSALDTVWLPRSYHTLHGDPAQP-SAVIVHDL 304 Query: 313 PTDSSDLGPDAEFGVAMRAARRASRXHDRD 342 P S+DLGPD F +R ARRA R RD Sbjct: 305 PGTSADLGPDPGFASLVRTARRAGRTGGRD 334 >ref|NP_770331.1| hypothetical protein bll3691 [Bradyrhizobium japonicum USDA 110] dbj|BAC48956.1| bll3691 [Bradyrhizobium japonicum USDA 110] Length = 411 Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 161/289 (55%), Positives = 202/289 (69%), Gaps = 6/289 (2%) Query: 56 RDHGVIILVEPPSGPAAEMLYRSLRADCAVVVPFGENPAFDFLKSKLTDFGTIGPSFDGP 115 R GVI+L EPPSG AAE+ YRSL + CAV +PFGENP FDFLKSKLT+FGT+ PS +GP Sbjct: 17 RHGGVIVLTEPPSGAAAELFYRSLHSGCAVAIPFGENPGFDFLKSKLTEFGTVSPSAEGP 76 Query: 116 HEMWWGGLNWRPIAPEQGSRSEASLR--VVSCYPRACGDDRARALRDKLAEFRIACDIAP 173 HE+WWGG+ W ++ S A++R +VS YP D R+LR L E + I P Sbjct: 77 HELWWGGIGWSKLS---ASADGATIRPRIVSYYPFGSDPDDIRSLRRSLDELELDSHIEP 133 Query: 174 IDTADGEHMRAADKSGFMLRMWEQHREPLLFIEADAVLSEPPLLPSHLDCDVALHKWNRW 233 + GE + +K+ F+ RMW+++ EPLLF+EA A L E PLLPS L CDVALHKWNRW Sbjct: 134 VAAELGEQVLCFEKAEFLARMWQRYSEPLLFVEAGATLCEAPLLPSALGCDVALHKWNRW 193 Query: 234 EMSARTLYLGRSPAAETVLRNWHHIASAHPAVWEGYSLDQAWSLTSSQMALDTVWLPRSY 293 EMSARTLYLGR+ A +LR+WHH+A+++P++W+GY LDQAW LTSS+ LDTVWLPRSY Sbjct: 194 EMSARTLYLGRTARAGQLLRSWHHLAASYPSIWDGYLLDQAWGLTSSEGPLDTVWLPRSY 253 Query: 294 HAPAEDAGTPRHTTIVHNLPTDSSDLGPDAEFGVAMRAARRASRXHDRD 342 HA D R TI+H+ T ++ LGPD F +RAARRA R RD Sbjct: 254 HAMKGDLAAAR-ATILHSEQTTTTSLGPDPGFAGLVRAARRAGRTGARD 301 >ref|YP_001239178.1| hypothetical protein BBta_3157 [Bradyrhizobium sp. BTAi1] gb|ABQ35272.1| hypothetical protein BBta_3157 [Bradyrhizobium sp. BTAi1] Length = 444 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 167/320 (52%), Positives = 208/320 (65%), Gaps = 5/320 (1%) Query: 18 QLLAANGIRMSAAQRRRLAWLSERLGPAVVHQAGSVPARDHGVIILVEPPSGPAAEMLYR 77 Q L A+G+ + Q RRL W+S GP V S +++L +PP+G AE+L Sbjct: 15 QTLRADGVWLGEHQARRLRWVSRTFGPPVRWDRLSEACGGRTILVL-DPPTGAGAELLVS 73 Query: 78 SLRADCAVVVPFGENPAFDFLKSKLTDFGTIGPSFDGPHEMWWGGLNWRPIAPEQGSRSE 137 SL + AVV+P GENPAFDFLKSKLT+FGT+G S DGPHE+WWGGL W AP R + Sbjct: 74 SLTSHDAVVIPLGENPAFDFLKSKLTEFGTVGASADGPHELWWGGLGWP--APVGAHRPD 131 Query: 138 ASLRVVSCYPRACGDDRARALRDKLAEFRIACDIAPIDTADGEHMRAADKSGFMLRMWEQ 197 A LRVVSC+ R GD LR L +A +I ID+ G+ + AAD++ F+ RMW++ Sbjct: 132 A-LRVVSCHARTIGDLHIYHLRRSLERLGLAFEIEAIDSGSGDRLTAADRADFVTRMWQR 190 Query: 198 HREPLLFIEADAVLSEPPLLPSHLDCDVALHKWNRWEMSARTLYLGRSPAAETVLRNWHH 257 H++PLLF+E D +L P LP CD A+HKWN WEMSARTLY GRS AAET+LR W Sbjct: 191 HKQPLLFVEPDVMLQAVPDLPELTGCDFAVHKWNGWEMSARTLYFGRSKAAETMLRTWSE 250 Query: 258 IASAHPAVWEGYSLDQAWSLTSSQMALDTVWLPRSYHAPAEDAGTPRHTTIVHNLPTDSS 317 +A P VW+GY +DQAWS +SQ+ALDTVWLPRSYHA A R +VHNL S Sbjct: 251 LARTFPDVWDGYLIDQAWSAVTSQIALDTVWLPRSYHAVAGQLAA-RSAVVVHNLKPTSG 309 Query: 318 DLGPDAEFGVAMRAARRASR 337 DLGPD +F +R ARRA R Sbjct: 310 DLGPDPDFATMVRPARRAGR 329 >ref|YP_001206823.1| hypothetical protein BRADO4894 [Bradyrhizobium sp. ORS 278] emb|CAL78606.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 442 Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 165/325 (50%), Positives = 204/325 (62%), Gaps = 5/325 (1%) Query: 20 LAANGIRMSAAQRRRLAWLSERLGPAVVHQAGSVPARDHGVIILVEPPSGPAAEMLYRSL 79 L A G+R+S Q RRL WLS GP +V A + +++++PP+GP AE+LY L Sbjct: 16 LRAVGVRLSTQQERRLQWLSRTFGP-LVSSANGLSTAAGRTLVVIDPPTGPGAELLYGRL 74 Query: 80 RADCAVVVPFGENPAFDFLKSKLTDFGTIGPSFDGPHEMWWGGLNWRPIAPEQGSRSEAS 139 AD AVV+PFGENPAFDFLKSKLT+FGT+G GPHE+WWGGL W+ PE S +A Sbjct: 75 TADDAVVIPFGENPAFDFLKSKLTEFGTVGACAAGPHELWWGGLGWK--LPEAASARDAP 132 Query: 140 LRVVSCYPRACGDDRARALRDKLAEFRIACDIAPIDTADGEHMRAADKSGFMLRMWEQHR 199 RVV C+P GD LR L + DI PI T + + A+K F+ RMW +H Sbjct: 133 -RVVCCHPSDTGDLHIYHLRRSLQRLGLPFDIEPIQTRRPDVVSTAEKIAFIQRMWRRHA 191 Query: 200 EPLLFIEADAVLSEPPLLPSHLDCDVALHKWNRWEMSARTLYLGRSPAAETVLRNWHHIA 259 PLLF+ D +L P LP D HKWN WEMSARTLY G+S AAE +L W IA Sbjct: 192 APLLFVAPDVMLQSVPSLPLLAGRDFGAHKWNGWEMSARTLYFGQSSAAEMLLSAWGEIA 251 Query: 260 SAHPAVWEGYSLDQAWSLTSSQMALDTVWLPRSYHAPAEDAGTPRHTTIVHNLPTDSSDL 319 S++P VWEGY +DQAWS SSQ+ LDT+WLPRSYHA A + G + IVHNL + DL Sbjct: 252 SSYPDVWEGYLIDQAWSSVSSQLPLDTIWLPRSYHAVAGEPGA-GNAVIVHNLNPSTVDL 310 Query: 320 GPDAEFGVAMRAARRASRXHDRDPV 344 GPD F +R+AR A R RDP+ Sbjct: 311 GPDPSFAEMVRSARHAGRAGGRDPL 335