BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0111.p (498 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001989750.1| flagellar hook-associated protein FlgK [Rhod... 620 e-175 ref|NP_770343.1| flagellar hook-associated protein [Bradyrhizobi... 620 e-175 ref|NP_946001.1| flagellar hook-associated protein 1 FlgK [Rhodo... 605 e-171 ref|YP_484390.1| flagellar hook-associated protein [Rhodopseudom... 579 e-163 ref|YP_779710.1| flagellar hook-associated protein FlgK [Rhodops... 578 e-163 >ref|YP_001989750.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris TIE-1] gb|ACE99274.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris TIE-1] Length = 587 Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust. Identities = 327/478 (68%), Positives = 401/478 (83%), Gaps = 3/478 (0%) Query: 19 LANTIAAFESALSSLASTPSSASLQSNAVSALAAVTTQLQQTSSGIQTLRSNADQDIASS 78 LANT+A+ ESALSSLASTP+S++LQSN V AL +VT+QL++TSSGIQ LRSNADQDIAS+ Sbjct: 111 LANTLASLESALSSLASTPTSSALQSNVVDALDSVTSQLRETSSGIQKLRSNADQDIASA 170 Query: 79 VTDINSDLQQISDLNKQIKQQAAAGQSTADLEDQRNSALQDLASMMNVSYFTTSSGDLQI 138 V +N D+Q+I+DLN IKQ AAAGQSTADLED+RN+ALQDL+S MNVSY+T S+GDLQ+ Sbjct: 171 VGSVNDDVQKIADLNAAIKQAAAAGQSTADLEDKRNTALQDLSSQMNVSYYTASNGDLQV 230 Query: 139 YTSSGQALVDSTAHPLSYTALPSVTASTTYSAGSSSGFSGISVNGVDITSQISSGKVSAL 198 YT++GQALVDSTAHPLSYT SV+A T+Y +G GFSGI +NGVD+TSQI+SGK+ AL Sbjct: 231 YTATGQALVDSTAHPLSYTTTASVSAVTSYGSG---GFSGIMLNGVDVTSQITSGKIGAL 287 Query: 199 ITLRDQTLPAAQSQLDELARQLAASVNAVSNQGTSVPPPASLTGAATVSSTTPLSATGTV 258 + LRDQTLPAAQSQLDELA+QLA S+NAVSN T++P PASLTG AT+SS+ LSATG+V Sbjct: 288 VALRDQTLPAAQSQLDELAQQLAVSLNAVSNGQTTLPAPASLTGTATLSSSDALSATGSV 347 Query: 259 RIAVADKSGNLVSYQDLDLSSYAMVGDLATAINGISGLSASVDANGHLSISTTTSGNGVA 318 R+AV D SG LVSY DLDLSSY VGDL AING+SGLSAS+D++GHL I+ T S GV+ Sbjct: 348 RLAVTDSSGRLVSYGDLDLSSYTSVGDLVNAINGVSGLSASIDSSGHLKIAATASNTGVS 407 Query: 319 INEMTSAVGSSAQGFSDYFGFNDLITGTGASDIAVRSDILNGTAALPTATLDASSTMAAG 378 I E++S+VGS+ +GFSDYFG NDL+T TGASDIAVRSDIL+G ++L ATL A++ + G Sbjct: 408 IGELSSSVGSAGEGFSDYFGLNDLVTATGASDIAVRSDILSGKSSLSLATLSAAAVLTTG 467 Query: 379 NSVLSPGSATVVNALSSALTGSTNFGMAGGLGATTGSFTDYAAAIVANVAGKATQASAAY 438 +SVLS A+ NAL ALTGST+F GGL A TGSF D+A+ IV++VAGKA+ AS+ Y Sbjct: 468 SSVLSSDGASAANALYDALTGSTSFKAVGGLAAVTGSFADFASTIVSSVAGKASLASSTY 527 Query: 439 TAKQTAQSTYANSLSSQSGVNIDEESANLSALQNKYAAASQIITAVNAMFSALMTAMS 496 + K+ AQSTYANSLSSQSGVN+DEESA LS LQNKY AASQ+I A+NAMF+AL++A+S Sbjct: 528 SVKEAAQSTYANSLSSQSGVNLDEESARLSELQNKYTAASQLIQAINAMFTALVSAVS 585 >ref|NP_770343.1| flagellar hook-associated protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48968.1| flaN [Bradyrhizobium japonicum USDA 110] Length = 582 Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust. Identities = 351/494 (71%), Positives = 418/494 (84%), Gaps = 8/494 (1%) Query: 2 RLYGSTSSSDSSTTGTSLANTIAAFESALSSLASTPSSASLQSNAVSALAAVTTQLQQTS 61 +LYGSTS+SDSS+TGTSLANT+A ESALSSLASTPSSASLQSNAVSAL V +QL++TS Sbjct: 94 KLYGSTSTSDSSSTGTSLANTLADLESALSSLASTPSSASLQSNAVSALNDVVSQLRETS 153 Query: 62 SGIQTLRSNADQDIASSVTDINSDLQQISDLNKQIKQQAAAGQSTADLEDQRNSALQDLA 121 SGIQ LRSNAD+DIASSV D+N DLQQI+++N +IKQ AA+GQSTADLEDQRN+ALQD+A Sbjct: 154 SGIQKLRSNADKDIASSVDDVNKDLQQIANVNAEIKQVAASGQSTADLEDQRNTALQDVA 213 Query: 122 SMMNVSYFTTSSGDLQIYTSSGQALVDSTAHPLSYTALPSVTASTTYSAGSSSGFSGISV 181 S MNVSYFT S+GDLQ+YT+SGQALVDS+AH +SYT +V++ST+ F ISV Sbjct: 214 SKMNVSYFTASNGDLQVYTTSGQALVDSSAHTISYTTAANVSSSTS--------FGAISV 265 Query: 182 NGVDITSQISSGKVSALITLRDQTLPAAQSQLDELARQLAASVNAVSNQGTSVPPPASLT 241 NGVDITSQI+SG + AL+TLRD+TLPAAQSQLD+LA+Q +++N+VSN +SVPPP SLT Sbjct: 266 NGVDITSQITSGDIGALVTLRDKTLPAAQSQLDQLAQQFTSALNSVSNSASSVPPPTSLT 325 Query: 242 GAATVSSTTPLSATGTVRIAVADKSGNLVSYQDLDLSSYAMVGDLATAINGISGLSASVD 301 G V+ST LSATGTV IA D+SGNLVSY DLDLSSYA VGDL TAINGISGLSASVD Sbjct: 326 GTTAVASTDALSATGTVHIAATDQSGNLVSYADLDLSSYATVGDLVTAINGISGLSASVD 385 Query: 302 ANGHLSISTTTSGNGVAINEMTSAVGSSAQGFSDYFGFNDLITGTGASDIAVRSDILNGT 361 +NGHL+IS T SGNGVAINEMTS+VGSS +G SDYFG ND++TGT A+DIAV+S L+G+ Sbjct: 386 SNGHLTISATGSGNGVAINEMTSSVGSSGEGLSDYFGLNDIVTGTSAADIAVKSSFLSGS 445 Query: 362 AALPTATLDASSTMAAGNSVLSPGSATVVNALSSALTGSTNFGMAGGLGATTGSFTDYAA 421 + LP ATLD+SST+ G+ VLS GSATVVN L LTGS +F AGGL +TGSF DYAA Sbjct: 446 SELPLATLDSSSTLTVGSRVLSSGSATVVNNLYDTLTGSRSFASAGGLAESTGSFADYAA 505 Query: 422 AIVANVAGKATQASAAYTAKQTAQSTYANSLSSQSGVNIDEESANLSALQNKYAAASQII 481 IV++VA KA+QAS+AYTAK+TAQSTYA+SLSSQSGVN+DEESA LS LQNKY+AAS +I Sbjct: 506 TIVSDVASKASQASSAYTAKETAQSTYADSLSSQSGVNLDEESARLSTLQNKYSAASALI 565 Query: 482 TAVNAMFSALMTAM 495 A+N M+SAL+ A+ Sbjct: 566 QAINTMYSALLNAV 579 >ref|NP_946001.1| flagellar hook-associated protein 1 FlgK [Rhodopseudomonas palustris CGA009] emb|CAE26092.1| possible flagellar hook-associated protein 1 (HAP1, FlgK protein) [Rhodopseudomonas palustris CGA009] Length = 587 Score = 605 bits (1560), Expect = e-171, Method: Compositional matrix adjust. Identities = 334/495 (67%), Positives = 412/495 (83%), Gaps = 3/495 (0%) Query: 2 RLYGSTSSSDSSTTGTSLANTIAAFESALSSLASTPSSASLQSNAVSALAAVTTQLQQTS 61 +LYGS++S+ S++TGTSLANT+A+ ESALSSLASTP+S++LQSN V AL VT+QL++TS Sbjct: 94 QLYGSSTSATSTSTGTSLANTLASLESALSSLASTPTSSALQSNVVDALDGVTSQLRETS 153 Query: 62 SGIQTLRSNADQDIASSVTDINSDLQQISDLNKQIKQQAAAGQSTADLEDQRNSALQDLA 121 SGIQ LRSNADQDIAS+V +N D+Q+I+DLN IKQ AAAGQSTADLED+RN+ALQDL+ Sbjct: 154 SGIQKLRSNADQDIASAVGSVNDDVQKIADLNAAIKQAAAAGQSTADLEDKRNTALQDLS 213 Query: 122 SMMNVSYFTTSSGDLQIYTSSGQALVDSTAHPLSYTALPSVTASTTYSAGSSSGFSGISV 181 S MNVSY+T S+GDLQ+YT++GQALVDSTAHPLSYT SV+A+T Y +G GFSGI + Sbjct: 214 SQMNVSYYTASNGDLQVYTATGQALVDSTAHPLSYTTTASVSAATNYGSG---GFSGIML 270 Query: 182 NGVDITSQISSGKVSALITLRDQTLPAAQSQLDELARQLAASVNAVSNQGTSVPPPASLT 241 NGVD+TSQI+SGK+ AL+ LRDQTLPAAQSQLDELA+Q S+NAVSN T++P PASLT Sbjct: 271 NGVDVTSQITSGKIGALVALRDQTLPAAQSQLDELAQQFVVSLNAVSNGQTTLPAPASLT 330 Query: 242 GAATVSSTTPLSATGTVRIAVADKSGNLVSYQDLDLSSYAMVGDLATAINGISGLSASVD 301 G ATVSS LSATG+VR+AV D SG L+SY DLDLSSY VGDL AING+SGLSAS+D Sbjct: 331 GTATVSSADALSATGSVRLAVTDSSGKLISYSDLDLSSYTSVGDLVNAINGVSGLSASID 390 Query: 302 ANGHLSISTTTSGNGVAINEMTSAVGSSAQGFSDYFGFNDLITGTGASDIAVRSDILNGT 361 ++GHL I+ T S GV+I E+TS+VGS+ +GFSD FG NDL+T TGASDIAVRSDIL+G Sbjct: 391 SSGHLKIAATASNTGVSIGELTSSVGSAGEGFSDCFGLNDLVTATGASDIAVRSDILSGK 450 Query: 362 AALPTATLDASSTMAAGNSVLSPGSATVVNALSSALTGSTNFGMAGGLGATTGSFTDYAA 421 ++L ATL +++ + G+SVLS A+ NAL LTGST+F GGL A TGSF D A+ Sbjct: 451 SSLSLATLSSAAALTTGSSVLSSDGASAANALYDVLTGSTSFKAVGGLAAVTGSFADIAS 510 Query: 422 AIVANVAGKATQASAAYTAKQTAQSTYANSLSSQSGVNIDEESANLSALQNKYAAASQII 481 IV++V+GKA+QAS+ Y+AK+ AQSTYANSLSSQSGVN+DEESA LS LQNKY AASQ+I Sbjct: 511 TIVSSVSGKASQASSTYSAKEAAQSTYANSLSSQSGVNLDEESARLSELQNKYTAASQLI 570 Query: 482 TAVNAMFSALMTAMS 496 A+NAMF+AL++A+S Sbjct: 571 QAINAMFTALVSAVS 585 >ref|YP_484390.1| flagellar hook-associated protein [Rhodopseudomonas palustris HaA2] gb|ABD05479.1| Flagellar hook-associated protein [Rhodopseudomonas palustris HaA2] Length = 588 Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust. Identities = 321/493 (65%), Positives = 395/493 (80%), Gaps = 3/493 (0%) Query: 3 LYGSTSSSDSSTTGTSLANTIAAFESALSSLASTPSSASLQSNAVSALAAVTTQLQQTSS 62 LYGSTS ++ TGTSLANT+A+ ESA++SLA TPSSASLQ+N VSAL + +QL++TSS Sbjct: 95 LYGSTSGAND--TGTSLANTLASLESAVTSLAGTPSSASLQANVVSALDDLASQLRETSS 152 Query: 63 GIQTLRSNADQDIASSVTDINSDLQQISDLNKQIKQQAAAGQSTADLEDQRNSALQDLAS 122 GIQ+LR++AD +IA+ V ++N+ L+ I DLN QIKQ AA+G STADLEDQRN ALQ +A Sbjct: 153 GIQSLRADADAEIAADVDEVNTALKTIDDLNDQIKQAAASGNSTADLEDQRNVALQTVAG 212 Query: 123 MMNVSYFTTSSGDLQIYTSSGQALVDSTAHPLSYTALPSVTASTTYSAGSSSGFSGISVN 182 MN+SYF +SSGD+Q+YTS GQALVDS+AH LS+TA SV AS+TY G+SSG SGI++N Sbjct: 213 KMNISYFVSSSGDMQVYTSGGQALVDSSAHLLSFTAASSVKASSTYD-GTSSGLSGITLN 271 Query: 183 GVDITSQISSGKVSALITLRDQTLPAAQSQLDELARQLAASVNAVSNQGTSVPPPASLTG 242 GVD+TSQISSG++ AL LRD LPAAQ+QLD+LA LA S+N SN GTS+PPPA+LTG Sbjct: 272 GVDVTSQISSGEIGALFDLRDTELPAAQAQLDQLATTLADSLNTASNAGTSLPPPATLTG 331 Query: 243 AATVSSTTPLSATGTVRIAVADKSGNLVSYQDLDLSSYAMVGDLATAINGISGLSASVDA 302 V+S+T LSATG VRIAVAD+SGNLVSY DLDLSSYA VGDL IN ISGLSA++D+ Sbjct: 332 TTAVTSSTALSATGIVRIAVADQSGNLVSYGDLDLSSYATVGDLVDGINAISGLSAAIDS 391 Query: 303 NGHLSISTTTSGNGVAINEMTSAVGSSAQGFSDYFGFNDLITGTGASDIAVRSDILNGTA 362 +G L IS T SGNGVAINEMT AVG+ G SDYFG NDL+TGTGAS+ AVRSDIL + Sbjct: 392 SGKLVISATGSGNGVAINEMTGAVGADGAGLSDYFGLNDLVTGTGASNFAVRSDILANSG 451 Query: 363 ALPTATLDASSTMAAGNSVLSPGSATVVNALSSALTGSTNFGMAGGLGATTGSFTDYAAA 422 TLD S+T+ G+ VL+ GS+ VV+ L SALT S +FG +GGLG+TTGSF DYAA Sbjct: 452 LFQVTTLDDSATLTTGSKVLTAGSSDVVDGLYSALTESRSFGASGGLGSTTGSFADYAAD 511 Query: 423 IVANVAGKATQASAAYTAKQTAQSTYANSLSSQSGVNIDEESANLSALQNKYAAASQIIT 482 IV+NVA KAT A+ YTAK T QS+ AN+L+SQSGVN+DEE+A +S+LQN+Y AASQ+I Sbjct: 512 IVSNVASKATSAATTYTAKSTTQSSLANALTSQSGVNLDEETAKISSLQNQYTAASQLIQ 571 Query: 483 AVNAMFSALMTAM 495 +N MFS+LMTA+ Sbjct: 572 VINEMFSSLMTAV 584 >ref|YP_779710.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris BisA53] gb|ABJ04730.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris BisA53] Length = 589 Score = 578 bits (1491), Expect = e-163, Method: Compositional matrix adjust. Identities = 315/493 (63%), Positives = 395/493 (80%), Gaps = 2/493 (0%) Query: 3 LYGSTSSSDSSTTGTSLANTIAAFESALSSLASTPSSASLQSNAVSALAAVTTQLQQTSS 62 LYGSTS D S GTSLAN+IAAFE+A++SLA+TP SASLQ+NAVSAL ++ +QL++TSS Sbjct: 95 LYGSTSDDDGS--GTSLANSIAAFETAIASLAATPGSASLQANAVSALDSLASQLRETSS 152 Query: 63 GIQTLRSNADQDIASSVTDINSDLQQISDLNKQIKQQAAAGQSTADLEDQRNSALQDLAS 122 GIQ LRS+ADQ IAS+V D+N L I+ LN QIKQ AA+ Q T DLEDQRN+ALQ++AS Sbjct: 153 GIQDLRSDADQSIASAVDDVNEQLNAIASLNAQIKQAAASNQPTGDLEDQRNTALQEIAS 212 Query: 123 MMNVSYFTTSSGDLQIYTSSGQALVDSTAHPLSYTALPSVTASTTYSAGSSSGFSGISVN 182 +NVSYF +SSGD+QIYTSSGQAL+DS+ H LSYT +V ASTTYS SGFSGI VN Sbjct: 213 RINVSYFISSSGDMQIYTSSGQALLDSSVHELSYTTASTVAASTTYSTTPPSGFSGILVN 272 Query: 183 GVDITSQISSGKVSALITLRDQTLPAAQSQLDELARQLAASVNAVSNQGTSVPPPASLTG 242 G DITSQISSG V ALITLRD TLPAAQ+QLD+LA LA S+NAVSN GTS+PPP +LTG Sbjct: 273 GTDITSQISSGSVGALITLRDTTLPAAQAQLDQLATTLADSLNAVSNLGTSLPPPQTLTG 332 Query: 243 AATVSSTTPLSATGTVRIAVADKSGNLVSYQDLDLSSYAMVGDLATAINGISGLSASVDA 302 V+S+T LSATG+VR+AV D+SG L SY DLDL+SY VG L TAINGISGLSAS+D+ Sbjct: 333 TTAVTSSTALSATGSVRVAVTDQSGALASYADLDLASYTTVGALVTAINGISGLSASIDS 392 Query: 303 NGHLSISTTTSGNGVAINEMTSAVGSSAQGFSDYFGFNDLITGTGASDIAVRSDILNGTA 362 +GH+ I+ ++S NGV+I MT++VGS SD+ G NDL+T TGASD + + IL + Sbjct: 393 SGHVVIAASSSSNGVSIGNMTASVGSDGASLSDWLGLNDLVTATGASDFKLSAAILADPS 452 Query: 363 ALPTATLDASSTMAAGNSVLSPGSATVVNALSSALTGSTNFGMAGGLGATTGSFTDYAAA 422 L T++LD+++T+ G +VLS GSAT+V+ LSSALTGS++F GGLG+TTGS DYA+A Sbjct: 453 KLQTSSLDSAATLTTGGTVLSSGSATIVDKLSSALTGSSSFAAVGGLGSTTGSLADYASA 512 Query: 423 IVANVAGKATQASAAYTAKQTAQSTYANSLSSQSGVNIDEESANLSALQNKYAAASQIIT 482 ++A VA +A+ A AYTAKQT +ST A++++SQSGVN+DEE+A LS LQN+YAAASQ+I Sbjct: 513 LIAKVAAQASAAGDAYTAKQTTRSTLASAMASQSGVNLDEETAKLSTLQNQYAAASQLIQ 572 Query: 483 AVNAMFSALMTAM 495 AVNAMF AL++A+ Sbjct: 573 AVNAMFDALISAV 585