BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0115.0105.p         (132 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_772846.1| hypothetical protein bll6206 [Bradyrhizobium ja...   206   9e-52
ref|YP_783093.1| hypothetical protein RPE_4188 [Rhodopseudomonas...   148   2e-34
ref|YP_001756263.1| signal transduction protein [Methylobacteriu...   140   5e-32
ref|YP_001756951.1| calcium-binding EF-hand-containing protein [...   139   1e-31
ref|YP_003755441.1| Calcium-binding EF-hand-containing protein [...   138   3e-31

>ref|NP_772846.1| hypothetical protein bll6206 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51471.1| bll6206 [Bradyrhizobium japonicum USDA 110]
          Length = 135

 Score =  206 bits (524), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 108/132 (81%), Positives = 117/132 (88%), Gaps = 2/132 (1%)

Query: 1   MISRRSLALTLAMAVLSAPALAASGRKGALKMLDPDNDGTVDLAEAKKAAANLFAKLDPD 60
           M+SRRS+ALTL +A+LS PA +ASG   A+KM D DNDGT+DLAE KKAA  LFAKLDPD
Sbjct: 6   MMSRRSVALTLTVALLSGPAWSASG--NAVKMFDTDNDGTLDLAEVKKAATALFAKLDPD 63

Query: 61  HDGTLDARELRGRLTAKELAAADPDHDGTLTLDEYLVVVEQRFKAADPDNDGTLDAKELN 120
           HDGTLDARELRGRLTAKELAAADPD DGTLTLDEYL VVEQRF AA+PD DGTLDAKELN
Sbjct: 64  HDGTLDARELRGRLTAKELAAADPDRDGTLTLDEYLAVVEQRFNAANPDKDGTLDAKELN 123

Query: 121 SRAGRALLRLLK 132
           SRAGRALLRLL+
Sbjct: 124 SRAGRALLRLLR 135


>ref|YP_783093.1| hypothetical protein RPE_4188 [Rhodopseudomonas palustris BisA53]
 gb|ABJ08113.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
          Length = 129

 Score =  148 bits (374), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/133 (63%), Positives = 110/133 (82%), Gaps = 5/133 (3%)

Query: 1   MISRRSLALTLAMAVL-SAPALAASGRKGALKMLDPDNDGTVDLAEAKKAAANLFAKLDP 59
           M  R S+ L++A+++L +APA +AS    A+KMLDPDNDGT+DLAEAK AAA LF KLDP
Sbjct: 1   MRMRHSVMLSMALSMLATAPAWSAS----AMKMLDPDNDGTMDLAEAKAAAAKLFVKLDP 56

Query: 60  DHDGTLDARELRGRLTAKELAAADPDHDGTLTLDEYLVVVEQRFKAADPDNDGTLDAKEL 119
           D DGTLD RELRGR+ A++ AAA+PD+DGT+  +EY+ +VE+RF AA+PDNDGT+DAKEL
Sbjct: 57  DRDGTLDRRELRGRVNARDFAAANPDNDGTIDKNEYMALVERRFIAANPDNDGTIDAKEL 116

Query: 120 NSRAGRALLRLLK 132
            S AG+ALL+LL+
Sbjct: 117 ASPAGKALLKLLR 129


>ref|YP_001756263.1| signal transduction protein [Methylobacterium radiotolerans JCM
           2831]
 gb|ACB25580.1| putative signal transduction protein with EFhand domain protein
           [Methylobacterium radiotolerans JCM 2831]
          Length = 137

 Score =  140 bits (354), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 76/127 (59%), Positives = 94/127 (74%), Gaps = 2/127 (1%)

Query: 8   ALTLAMAVLSAPALAASGRKGA--LKMLDPDNDGTVDLAEAKKAAANLFAKLDPDHDGTL 65
           A+TLA+  LSAPA  A    GA  +KM+D DNDGTVD+ E +  A+  F +L+ D DGTL
Sbjct: 11  AVTLAVCGLSAPAALAKPVSGASAVKMIDTDNDGTVDMKEVEAVASATFDRLEKDSDGTL 70

Query: 66  DARELRGRLTAKELAAADPDHDGTLTLDEYLVVVEQRFKAADPDNDGTLDAKELNSRAGR 125
           DA+EL+GRL+   +  ADPD+DGTL   EYL  V +RFK ADPDNDGTLDAKELNS+AG+
Sbjct: 71  DAKELKGRLSKAGVQQADPDNDGTLDKKEYLAAVGERFKMADPDNDGTLDAKELNSKAGK 130

Query: 126 ALLRLLK 132
           ALL L+K
Sbjct: 131 ALLALIK 137


>ref|YP_001756951.1| calcium-binding EF-hand-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gb|ACB26268.1| Calcium-binding EF-hand-containing protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 151

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/110 (65%), Positives = 89/110 (80%)

Query: 23  ASGRKGALKMLDPDNDGTVDLAEAKKAAANLFAKLDPDHDGTLDARELRGRLTAKELAAA 82
           +SG + ALKM+D D+DGT+DLAEA+ AA  +F   + D DGT+DA+EL+GRL+ K+L AA
Sbjct: 42  SSGTERALKMVDTDHDGTIDLAEAQAAAGKVFDAAETDKDGTVDAKELKGRLSKKDLKAA 101

Query: 83  DPDHDGTLTLDEYLVVVEQRFKAADPDNDGTLDAKELNSRAGRALLRLLK 132
           D D DGTL   EYL +VEQRFKAADPDNDGTLDA+EL S AGR+LL+LLK
Sbjct: 102 DTDSDGTLDRKEYLALVEQRFKAADPDNDGTLDARELKSPAGRSLLQLLK 151


>ref|YP_003755441.1| Calcium-binding EF-hand-containing protein [Hyphomicrobium
           denitrificans ATCC 51888]
 gb|ADJ23120.1| Calcium-binding EF-hand-containing protein [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 135

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/121 (61%), Positives = 88/121 (72%), Gaps = 7/121 (5%)

Query: 19  PALAASGR-------KGALKMLDPDNDGTVDLAEAKKAAANLFAKLDPDHDGTLDARELR 71
           P LAAS           +L  LDPDNDGTVDL EAK AAA LF KLDPD+DGTLDA+EL 
Sbjct: 15  PGLAASAHLDKAMAASASLTALDPDNDGTVDLQEAKAAAAKLFTKLDPDNDGTLDAKELS 74

Query: 72  GRLTAKELAAADPDHDGTLTLDEYLVVVEQRFKAADPDNDGTLDAKELNSRAGRALLRLL 131
           GR+   EL AADPD+DGTL   EY  +VE RFKAA+PD+DGTLD KEL++ AG+A L L+
Sbjct: 75  GRVDEAELKAADPDNDGTLDQKEYEAIVEARFKAANPDDDGTLDEKELSTDAGKAFLLLV 134

Query: 132 K 132
           +
Sbjct: 135 E 135