BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0101.p (319 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769266.1| chaperone protein [Bradyrhizobium japonicum USD... 462 e-128 ref|ZP_07027924.1| chaperone DnaJ domain protein [Afipia sp. 1NL... 445 e-123 ref|YP_484828.1| heat shock protein DnaJ [Rhodopseudomonas palus... 443 e-122 ref|ZP_01044522.1| Heat shock protein DnaJ [Nitrobacter sp. Nb-3... 439 e-121 ref|YP_004107726.1| heat shock protein DnaJ domain-containing pr... 437 e-120 >ref|NP_769266.1| chaperone protein [Bradyrhizobium japonicum USDA 110] dbj|BAC47891.1| chaperone protein [Bradyrhizobium japonicum USDA 110] Length = 320 Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust. Identities = 259/320 (80%), Positives = 289/320 (90%), Gaps = 1/320 (0%) Query: 1 MRDPYEVLGVQRSASAATIKSAYRKLAKKHHPDNNKNDPKAAARFAEINTANEIVGDEDK 60 MRDPYEVLGV RSA+AA IKSAYRKLAKKHHPD+NK+DPKAA RFAE+N+ANEI+GDEDK Sbjct: 1 MRDPYEVLGVPRSANAAAIKSAYRKLAKKHHPDSNKDDPKAAERFAELNSANEILGDEDK 60 Query: 61 RKQFDRGEIDAEGKPRFQGFPGGGGAGGRAGPGGFE-YSFRSGPGGGMGGGSFEDILNSM 119 RKQFDRGEIDA+GKPRFQGFPGGGG GRAGPGGFE Y+FRSG G G GGG+FEDILNSM Sbjct: 61 RKQFDRGEIDADGKPRFQGFPGGGGPRGRAGPGGFESYTFRSGGGPGQGGGAFEDILNSM 120 Query: 120 FGNAARGGSGRAGRASPFEFDGGGVGVDLDLSVAMTVSLEESVRGGDKRVRLPTGRELNV 179 FG RG AG A FEFD GG+G+DLD++VAM+VSLEESV+GG+KRVRLPTG+ELNV Sbjct: 121 FGGGVRGARPGAGGAGQFEFDTGGIGLDLDVNVAMSVSLEESVKGGEKRVRLPTGKELNV 180 Query: 180 KIPPGVAAGQQIRLKGQGETAQGHPPGDLLITISIAPHPFFKVDGNDLRIDLPITLYEAV 239 KIP GV GQQIRL+GQGE+AQGHPPGDLLITI IAPHP+FKV+G DLRIDLP+TLYEAV Sbjct: 181 KIPAGVTEGQQIRLRGQGESAQGHPPGDLLITIGIAPHPYFKVEGADLRIDLPVTLYEAV 240 Query: 240 LGGKVRVPTLGSAVELSIPKNTSSGRTFRLKGKGLSKTGATGDLYVTTRIILPDGNDAEL 299 LGGKVRVPTLG+AVELS+PKNTSSGRTFRLKGKGL K G TGDL+VT RI+LPDGNDAEL Sbjct: 241 LGGKVRVPTLGNAVELSVPKNTSSGRTFRLKGKGLPKAGGTGDLFVTVRIMLPDGNDAEL 300 Query: 300 EALMQTWRERNPYNPRSDLG 319 EALM+ WR+++PYNPRS LG Sbjct: 301 EALMEKWRDQHPYNPRSGLG 320 >ref|ZP_07027924.1| chaperone DnaJ domain protein [Afipia sp. 1NLS2] gb|EFI50745.1| chaperone DnaJ domain protein [Afipia sp. 1NLS2] Length = 326 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 245/327 (74%), Positives = 269/327 (82%), Gaps = 9/327 (2%) Query: 1 MRDPYEVLGVQRSASAATIKSAYRKLAKKHHPDNNKNDPKAAARFAEINTANEIVGDEDK 60 MRDPYEVLGVQRSASAA IKSA+RKLAKKHHPD NKND KAAARFAEIN+ANEI+GDE K Sbjct: 1 MRDPYEVLGVQRSASAAEIKSAFRKLAKKHHPDANKNDAKAAARFAEINSANEILGDEAK 60 Query: 61 RKQFDRGEIDAEGKPRFQGFPGGG------GAGGRAGPGGFEYSF--RSGPGGGMGGGSF 112 RKQFDRGEIDAEGKPRFQGF G G GA GRAGPGGFEYSF G G SF Sbjct: 61 RKQFDRGEIDAEGKPRFQGFEGAGSPFGARGAQGRAGPGGFEYSFTGGGPGAGAAGANSF 120 Query: 113 EDILNSMFGNAARGGSGRAGRASPFEFDGGGVGVDLDLSVAMTVSLEESVRGGDKRVRLP 172 EDIL+SMFG A G G FEFD G VGVDLD++ M+VSLEE+V G +KR+RLP Sbjct: 121 EDILSSMFGGRAGMGGGARAGRGGFEFDSG-VGVDLDVAATMSVSLEEAVNGANKRIRLP 179 Query: 173 TGRELNVKIPPGVAAGQQIRLKGQGETAQGHPPGDLLITISIAPHPFFKVDGNDLRIDLP 232 G+ELNVKIP GV +GQQIRLKGQG+TA GHPPGD+L+TI+IAPHPFFKVDGNDLR++LP Sbjct: 180 NGKELNVKIPVGVTSGQQIRLKGQGDTAPGHPPGDVLLTINIAPHPFFKVDGNDLRVELP 239 Query: 233 ITLYEAVLGGKVRVPTLGSAVELSIPKNTSSGRTFRLKGKGLSKTGATGDLYVTTRIILP 292 +TLYEAVLGGKVRVPTL AVEL+IPKNTSSGRTFRLKGKG+ GA GDLYVT RI+LP Sbjct: 240 VTLYEAVLGGKVRVPTLKGAVELTIPKNTSSGRTFRLKGKGVPAKGAGGDLYVTIRIVLP 299 Query: 293 DGNDAELEALMQTWRERNPYNPRSDLG 319 DGNDAELEALM+ WR + YNPRS LG Sbjct: 300 DGNDAELEALMEKWRTSHVYNPRSGLG 326 >ref|YP_484828.1| heat shock protein DnaJ [Rhodopseudomonas palustris HaA2] gb|ABD05917.1| Heat shock protein DnaJ [Rhodopseudomonas palustris HaA2] Length = 323 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 242/323 (74%), Positives = 271/323 (83%), Gaps = 4/323 (1%) Query: 1 MRDPYEVLGVQRSASAATIKSAYRKLAKKHHPDNNKNDPKAAARFAEINTANEIVGDEDK 60 MRDPYEVLGVQR ASA+ IKSAYRKLAKKHHPD N NDPKAAARFAE+N+ANEI+GDE K Sbjct: 1 MRDPYEVLGVQRDASASAIKSAYRKLAKKHHPDANANDPKAAARFAEVNSANEIIGDEAK 60 Query: 61 RKQFDRGEIDAEGKPRFQGFPGGGGAGGRAGPGG-FE-YSFRSGPGGGMGGGSF--EDIL 116 RKQ+DRGEIDAEGKPRFQGFPGGGGA G GG FE ++FR+ GG GGG EDIL Sbjct: 61 RKQYDRGEIDAEGKPRFQGFPGGGGARGGRAGGGGFEQHNFRNAGGGFAGGGGAGFEDIL 120 Query: 117 NSMFGNAARGGSGRAGRASPFEFDGGGVGVDLDLSVAMTVSLEESVRGGDKRVRLPTGRE 176 NSMFG AA G G A F+FD GG DLD +VAMTV+LEE+ +G +KRVRLPTG+E Sbjct: 121 NSMFGGAAGMRGGPRGGAQGFDFDTGGFAPDLDQTVAMTVTLEEAAKGTEKRVRLPTGKE 180 Query: 177 LNVKIPPGVAAGQQIRLKGQGETAQGHPPGDLLITISIAPHPFFKVDGNDLRIDLPITLY 236 LNVKIP GV++GQQIRLKGQGE+A GH PGDLLIT++ A HP FKVDGNDLR++LPITLY Sbjct: 181 LNVKIPAGVSSGQQIRLKGQGESAPGHRPGDLLITVNYAAHPHFKVDGNDLRLELPITLY 240 Query: 237 EAVLGGKVRVPTLGSAVELSIPKNTSSGRTFRLKGKGLSKTGATGDLYVTTRIILPDGND 296 EAVLG KVRVPTL A+ELSIPKNTSSGRTFRLKGKGL K GA GDL+VTTRI+LPDG+D Sbjct: 241 EAVLGAKVRVPTLTGAIELSIPKNTSSGRTFRLKGKGLPKNGAAGDLFVTTRIVLPDGHD 300 Query: 297 AELEALMQTWRERNPYNPRSDLG 319 AELEALMQ WR+ +PY+PRSDL Sbjct: 301 AELEALMQKWRDGHPYHPRSDLA 323 >ref|ZP_01044522.1| Heat shock protein DnaJ [Nitrobacter sp. Nb-311A] gb|EAQ37303.1| Heat shock protein DnaJ [Nitrobacter sp. Nb-311A] Length = 313 Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust. Identities = 232/320 (72%), Positives = 262/320 (81%), Gaps = 8/320 (2%) Query: 1 MRDPYEVLGVQRSASAATIKSAYRKLAKKHHPDNNKNDPKAAARFAEINTANEIVGDEDK 60 MRDPYEVLGVQR ASAA IKSA+R+LAKKHHPD NKNDPKAA RFAE+N+ANEI+GDE + Sbjct: 1 MRDPYEVLGVQRGASAAAIKSAFRRLAKKHHPDANKNDPKAAERFAEVNSANEILGDEVR 60 Query: 61 RKQFDRGEIDAEGKPRFQGFPGGGGAGGRAGPGGFEYSFRSGPGGGMGGGSFEDILNSMF 120 RKQFDRGEIDA+GKPRFQGFPGGG AG R G GG G FEDILNSMF Sbjct: 61 RKQFDRGEIDADGKPRFQGFPGGGHAGARPG----GGFGGFRGGGSGSDGGFEDILNSMF 116 Query: 121 GNAARGGSGRAGRASPFEFDGGGVGV-DLDLSVAMTVSLEESVRGGDKRVRLPTGRELNV 179 G AARG R A F+F+ G DLDL+VAMTVSLEESV+GG+KR+RLP+G+ELNV Sbjct: 117 GGAARG---RRPGAQAFDFEASTFGTPDLDLNVAMTVSLEESVKGGEKRIRLPSGKELNV 173 Query: 180 KIPPGVAAGQQIRLKGQGETAQGHPPGDLLITISIAPHPFFKVDGNDLRIDLPITLYEAV 239 KIP GV + QQIRL+GQG+T GH PGDLLIT+++APHPFFKVDG DLR +LPITLYEAV Sbjct: 174 KIPAGVTSDQQIRLRGQGDTVPGHRPGDLLITVTVAPHPFFKVDGGDLRAELPITLYEAV 233 Query: 240 LGGKVRVPTLGSAVELSIPKNTSSGRTFRLKGKGLSKTGATGDLYVTTRIILPDGNDAEL 299 LG KVRVPTLG AVELSIP+NTS GRTFRLKGKG+ K G +GDL+VTTRI+LPDGNDAEL Sbjct: 234 LGSKVRVPTLGGAVELSIPRNTSGGRTFRLKGKGIPKGGTSGDLFVTTRIVLPDGNDAEL 293 Query: 300 EALMQTWRERNPYNPRSDLG 319 EALM+ WR+ + YNPR DLG Sbjct: 294 EALMEKWRDAHSYNPRRDLG 313 >ref|YP_004107726.1| heat shock protein DnaJ domain-containing protein [Rhodopseudomonas palustris DX-1] gb|ADU42993.1| heat shock protein DnaJ domain protein [Rhodopseudomonas palustris DX-1] Length = 323 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 244/326 (74%), Positives = 271/326 (83%), Gaps = 10/326 (3%) Query: 1 MRDPYEVLGVQRSASAATIKSAYRKLAKKHHPDNNKNDPKAAARFAEINTANEIVGDEDK 60 MRDPYEVLGVQR ASAA IKSAYRKLAKKHHPD+NKNDPKAAARFAEIN+ANEI+GDE K Sbjct: 1 MRDPYEVLGVQRDASAAAIKSAYRKLAKKHHPDSNKNDPKAAARFAEINSANEIIGDEAK 60 Query: 61 RKQFDRGEIDAEGKPRFQGFPGGGGAGGRAGPGGFE-YSFRSGPGGGMGGGSF---EDIL 116 RKQ+DRGEIDAEGKPRFQGFPGGGG +G GFE YSFRSG G G G G EDIL Sbjct: 61 RKQYDRGEIDAEGKPRFQGFPGGGGRASGSG--GFEQYSFRSGGGPGGGFGGAAGFEDIL 118 Query: 117 NSMFGNAARGGSGRAGRASP---FEFDGGGVGVDLDLSVAMTVSLEESVRGGDKRVRLPT 173 NSMFG AA + AG F+FD G DLD +V+MTV+LEE+ RG +KRVRLPT Sbjct: 119 NSMFGGAAGARAAGAGPRGRSQGFDFDTG-FAPDLDQTVSMTVTLEEAARGTEKRVRLPT 177 Query: 174 GRELNVKIPPGVAAGQQIRLKGQGETAQGHPPGDLLITISIAPHPFFKVDGNDLRIDLPI 233 G+ELNVKIP GV AGQQIRLKGQGE+A GH GDLLIT++IAPHP+FK+DGNDL+++L + Sbjct: 178 GKELNVKIPAGVGAGQQIRLKGQGESAPGHRAGDLLITVNIAPHPYFKIDGNDLKLELAL 237 Query: 234 TLYEAVLGGKVRVPTLGSAVELSIPKNTSSGRTFRLKGKGLSKTGATGDLYVTTRIILPD 293 TLYEAVLG KVRVPTL A+ELSIPKNTSSGR FRLKGKGL K GATGDL+VTTRIILPD Sbjct: 238 TLYEAVLGAKVRVPTLTGAIELSIPKNTSSGRIFRLKGKGLPKGGATGDLFVTTRIILPD 297 Query: 294 GNDAELEALMQTWRERNPYNPRSDLG 319 G+DAELE LMQ WR+ +PYNPRSDLG Sbjct: 298 GHDAELEKLMQKWRDNHPYNPRSDLG 323