BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0115.0097.p         (159 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771051.1| hypothetical protein blr4411 [Bradyrhizobium ja...   239   7e-62
ref|ZP_08629941.1| exported protein [Bradyrhizobiaceae bacterium...   223   5e-57
ref|YP_532657.1| hypothetical protein RPC_2790 [Rhodopseudomonas...   220   4e-56
ref|YP_577397.1| hypothetical protein Nham_2141 [Nitrobacter ham...   219   8e-56
ref|YP_318221.1| hypothetical protein Nwi_1608 [Nitrobacter wino...   213   8e-54

>ref|NP_771051.1| hypothetical protein blr4411 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49676.1| blr4411 [Bradyrhizobium japonicum USDA 110]
          Length = 161

 Score =  239 bits (611), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 115/149 (77%), Positives = 129/149 (86%)

Query: 11  RSWLMACLVIMFGALLAPAAQAASVQPLEIVTKSGVHVFSVEMATTEQEKETGLMYRKEL 70
           + WL A L+I    +     +AAS QPLEIVTKSGV VFSVEMATTE+EK+TGLMYRKEL
Sbjct: 13  KGWLAAILLIAGVVVAGGPVRAASFQPLEIVTKSGVQVFSVEMATTEEEKQTGLMYRKEL 72

Query: 71  ADGKGMLFDFSPEQEVSMWMKNTYISLDMIFIRADGRILRIAENTEPLSTRIIPSRGLAK 130
           ADGKGMLFDF+PEQEVSMWMKNTY+ LDMIFIRADGRILRIAENTEPLST+II S+G A+
Sbjct: 73  ADGKGMLFDFNPEQEVSMWMKNTYVPLDMIFIRADGRILRIAENTEPLSTKIISSKGPAR 132

Query: 131 GVLEVIAGTAQKYGIQPGDRVAHPLFGGR 159
            VLEV+AGTAQKYGI+PGDRV HPLFG +
Sbjct: 133 AVLEVVAGTAQKYGIRPGDRVGHPLFGSK 161


>ref|ZP_08629941.1| exported protein [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP07310.1| exported protein [Bradyrhizobiaceae bacterium SG-6C]
          Length = 164

 Score =  223 bits (569), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 110/138 (79%), Positives = 118/138 (85%)

Query: 22  FGALLAPAAQAASVQPLEIVTKSGVHVFSVEMATTEQEKETGLMYRKELADGKGMLFDFS 81
           F A     A AA  QPLEIVTKSGVHVF+VEMA TEQE+ TGLMYRKEL +G+GMLFDFS
Sbjct: 27  FIAGFGNGASAAETQPLEIVTKSGVHVFTVEMAKTEQERATGLMYRKELPEGRGMLFDFS 86

Query: 82  PEQEVSMWMKNTYISLDMIFIRADGRILRIAENTEPLSTRIIPSRGLAKGVLEVIAGTAQ 141
           PEQ VSMWMKNT+I LDMIFIR+DGRILRIAENTEP S +II S GLAKGVLEVI GTA+
Sbjct: 87  PEQPVSMWMKNTFIPLDMIFIRSDGRILRIAENTEPHSEKIISSGGLAKGVLEVIGGTAR 146

Query: 142 KYGIQPGDRVAHPLFGGR 159
           KYGIQPGDRVAHPLFG R
Sbjct: 147 KYGIQPGDRVAHPLFGTR 164


>ref|YP_532657.1| hypothetical protein RPC_2790 [Rhodopseudomonas palustris BisB18]
 gb|ABD88338.1| protein of unknown function DUF192 [Rhodopseudomonas palustris
           BisB18]
          Length = 160

 Score =  220 bits (561), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 115/156 (73%), Positives = 125/156 (80%), Gaps = 1/156 (0%)

Query: 4   VRSVGRHRSWLMACLVIMFGALLAPAAQAASVQPLEIVTKSGVHVFSVEMATTEQEKETG 63
           +RS  R  +  +A L +M    L  AA AA +Q LEIVTKSGV VF+VE+ATTEQEK TG
Sbjct: 6   IRSALRVGAGRLAAL-MMLATWLVGAASAAEMQTLEIVTKSGVQVFAVEVATTEQEKTTG 64

Query: 64  LMYRKELADGKGMLFDFSPEQEVSMWMKNTYISLDMIFIRADGRILRIAENTEPLSTRII 123
           LMYRKELADG+GMLFDFSPEQ VSMWMKNT+I LDMIFIRADGRI RIAENT P S  II
Sbjct: 65  LMYRKELADGRGMLFDFSPEQPVSMWMKNTFIPLDMIFIRADGRISRIAENTVPQSLSII 124

Query: 124 PSRGLAKGVLEVIAGTAQKYGIQPGDRVAHPLFGGR 159
           PS   AKGVLEVIAGTA+KYGI PGDRVAHPLF GR
Sbjct: 125 PSGPPAKGVLEVIAGTAKKYGIAPGDRVAHPLFNGR 160


>ref|YP_577397.1| hypothetical protein Nham_2141 [Nitrobacter hamburgensis X14]
 gb|ABE62937.1| protein of unknown function DUF192 [Nitrobacter hamburgensis X14]
          Length = 185

 Score =  219 bits (559), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 114/161 (70%), Positives = 127/161 (78%), Gaps = 8/161 (4%)

Query: 4   VRSVGRHRSWLMACL---VIMFGALLAPAA---QAASVQPLEIVTKSGVHVFSVEMATTE 57
           VR VG    WL A L   ++ +  ++ P      AA  QPLEI T++GV +FSVEMATTE
Sbjct: 26  VRKVGLE--WLRAGLWVALLSWIGMVTPGCAGVHAAEFQPLEIATRAGVKMFSVEMATTE 83

Query: 58  QEKETGLMYRKELADGKGMLFDFSPEQEVSMWMKNTYISLDMIFIRADGRILRIAENTEP 117
           +EK TGLMYRK L DG+GMLFDFSP Q+VSMWMKNTYISLDMIFI  DGRILRIAENTEP
Sbjct: 84  EEKATGLMYRKHLPDGQGMLFDFSPAQQVSMWMKNTYISLDMIFIGPDGRILRIAENTEP 143

Query: 118 LSTRIIPSRGLAKGVLEVIAGTAQKYGIQPGDRVAHPLFGG 158
           LSTRIIPSRG  KGVLEVIAGTA+KYGI PGDRV+HPLF G
Sbjct: 144 LSTRIIPSRGPTKGVLEVIAGTAKKYGIAPGDRVSHPLFNG 184


>ref|YP_318221.1| hypothetical protein Nwi_1608 [Nitrobacter winogradskyi Nb-255]
 gb|ABA04869.1| Protein of unknown function DUF192 [Nitrobacter winogradskyi
           Nb-255]
          Length = 163

 Score =  213 bits (542), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 107/153 (69%), Positives = 124/153 (81%), Gaps = 6/153 (3%)

Query: 13  WLMACL-VIMFG--ALLAP---AAQAASVQPLEIVTKSGVHVFSVEMATTEQEKETGLMY 66
           W  A L +++F    ++AP      AA  QPLEI T++GV +FSVEMATT +EK TGLM+
Sbjct: 11  WFRAGLGIVLFSWIVVVAPDDGGVHAAEFQPLEIATRTGVKIFSVEMATTPEEKATGLMH 70

Query: 67  RKELADGKGMLFDFSPEQEVSMWMKNTYISLDMIFIRADGRILRIAENTEPLSTRIIPSR 126
           RK L DG+GMLFDFSP Q+VSMWMKNTYISLDMIFI ++GRI+RIAENTEPLSTRII SR
Sbjct: 71  RKHLPDGQGMLFDFSPAQQVSMWMKNTYISLDMIFIGSNGRIVRIAENTEPLSTRIISSR 130

Query: 127 GLAKGVLEVIAGTAQKYGIQPGDRVAHPLFGGR 159
           GLAKGVLEVI GTA+KYGI  GDRV+HPLF GR
Sbjct: 131 GLAKGVLEVIGGTAKKYGIATGDRVSHPLFNGR 163