BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0115.0081.p         (114 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EGG23421.1| hypothetical protein DFA_05553 [Dictyostelium fas...    40   0.14 
ref|ZP_08025470.1| proteasome accessory factor PafA2 [Actinomyce...    34   8.6  

>gb|EGG23421.1| hypothetical protein DFA_05553 [Dictyostelium fasciculatum]
          Length = 1806

 Score = 39.7 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 16/80 (20%)

Query: 6   NWARKAAVLFLPIALGACAQ---VSQQYSMTTPPPGTGPLAWDGAGQDPNLPQPRRHARN 62
           NW R   V   PI++ A A+    S   S    PP             P +P P  HA  
Sbjct: 877 NWGRINVVFAPPISMKAYAEDMTASVSASRRLNPP-------------PTVPAPSAHANP 923

Query: 63  ASPAVADTSPAQLSEADADE 82
           A+ + A T+PA +SE D ++
Sbjct: 924 ATASPAPTTPANISEGDFEQ 943


>ref|ZP_08025470.1| proteasome accessory factor PafA2 [Actinomyces sp. oral taxon 178
          str. F0338]
 gb|EFW10950.1| proteasome accessory factor PafA2 [Actinomyces sp. oral taxon 178
          str. F0338]
          Length = 504

 Score = 33.9 bits (76), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 10/77 (12%)

Query: 17 PIALGAC-----AQVSQQYSMTTPPPGTGPLAWDGAGQDP--NLPQPRRHARNASPAVAD 69
          PIAL A      AQVS++    TP  G  P+ WD  G+DP  +L   R     A P++  
Sbjct: 25 PIALSAAVVDAYAQVSRE---RTPARGAPPVRWDYTGEDPLNDLRGMRMSRAAADPSLLT 81

Query: 70 TSPAQLSEADADERLAR 86
            P  L+ +   ER+AR
Sbjct: 82 DDPYHLAPSGGHERVAR 98