BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0080.p (410 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242826.1| allantoate amidohydrolase [Bradyrhizobium sp... 667 0.0 ref|NP_772889.1| allantoate amidohydrolase [Bradyrhizobium japon... 662 0.0 ref|YP_001203165.1| allantoate amidohydrolase [Bradyrhizobium sp... 655 0.0 ref|YP_002498921.1| allantoate amidohydrolase [Methylobacterium ... 408 e-112 ref|YP_001769429.1| allantoate amidohydrolase [Methylobacterium ... 404 e-110 >ref|YP_001242826.1| allantoate amidohydrolase [Bradyrhizobium sp. BTAi1] gb|ABQ38920.1| Putative N-carbamoyl-L-amino acid hydrolase(L-carbamoylase) [Bradyrhizobium sp. BTAi1] Length = 419 Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/403 (81%), Positives = 352/403 (87%) Query: 7 RFDGKRVLADLNALRAIGAYKTGVHKPTFSEPHLRSLDWLAARLPDADLTATIDGIGNVL 66 R DG RVLADLNALRA G YKTGVH+PTFSE H +SL WLA RLPDA LT TIDGIGNVL Sbjct: 7 RADGARVLADLNALRAFGRYKTGVHRPTFSEAHRQSLSWLAERLPDAQLTPTIDGIGNVL 66 Query: 67 GSSAKAGPKLLAGSHLESQNHAGWLDGPLGVIYALEAARVINTDPDANGAVEVAAWCDEE 126 G+SAK GPKLLAGSHLESQNHAGWLDGPLGVIYALEAARV+N DP GAVEVA+WCDEE Sbjct: 67 GTSAKPGPKLLAGSHLESQNHAGWLDGPLGVIYALEAARVLNPDPSIPGAVEVASWCDEE 126 Query: 127 GHFGSFLGSRSFVGAVTEADIDAARDRSSDRTMRDALRDAGFAGRPRLNAEAGRHVGYLE 186 GHFGSFLGSRS+VG V+EADIDAARDRSS R+MR+AL + G AGRPRL AE GRH+GYLE Sbjct: 127 GHFGSFLGSRSYVGQVSEADIDAARDRSSPRSMREALTEMGLAGRPRLQAERGRHIGYLE 186 Query: 187 AHIEQGDMLESSGLKIGVVTSIVGIWQYRITFTGEQNHAGTTRMAVRRDAGLALARFCVA 246 AHIEQGD LE S LKIG+VTSIVGIWQYRI FTGEQNHAGTTRMAVR+DAGLALARFCVA Sbjct: 187 AHIEQGDTLEHSELKIGIVTSIVGIWQYRIVFTGEQNHAGTTRMAVRKDAGLALARFCVA 246 Query: 247 IDDSFPALSGPRTVWTTGRITLDPGAPSIIPGHADMLFQIRDDNSEVIARLEQQLHRLAT 306 ID FPA GPRTVWTTGRITLDPGAPSIIPG A+MLFQIRDD+ VIARLEQ LH LA Sbjct: 247 IDARFPAACGPRTVWTTGRITLDPGAPSIIPGRAEMLFQIRDDDPAVIARLEQLLHALAD 306 Query: 307 EATAQGRCGVKVERIRTGVPAMMTPAFQDAIEAASAACAGGKSIRMPSGAGHDAQVLATI 366 +A G C + VERIRTG PAMM AFQD IEAAS AGG+S+RMPSGAGHDAQVLATI Sbjct: 307 ADSASGSCQIAVERIRTGAPAMMDAAFQDTIEAASRDLAGGRSLRMPSGAGHDAQVLATI 366 Query: 367 MPAAMLFVPSIGGISHHWSENTDEADIVTGAEVFVETCRRLLA 409 MPA MLFVPSIGG+SHHW+ENT +ADIVTGA+VFVETCRRLLA Sbjct: 367 MPAGMLFVPSIGGVSHHWTENTADADIVTGADVFVETCRRLLA 409 >ref|NP_772889.1| allantoate amidohydrolase [Bradyrhizobium japonicum USDA 110] dbj|BAC51514.1| blr6249 [Bradyrhizobium japonicum USDA 110] Length = 410 Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/410 (77%), Positives = 351/410 (85%) Query: 1 MPGINGRFDGKRVLADLNALRAIGAYKTGVHKPTFSEPHLRSLDWLAARLPDADLTATID 60 MP FDG RVLADLNALRAIGAYKTGVHKPTFSEPH +SL+WL +LPDA L+A +D Sbjct: 1 MPDNGPSFDGARVLADLNALRAIGAYKTGVHKPTFSEPHKQSLEWLVQKLPDASLSAAVD 60 Query: 61 GIGNVLGSSAKAGPKLLAGSHLESQNHAGWLDGPLGVIYALEAARVINTDPDANGAVEVA 120 GIGNV G+S K GPKLLAGSHLESQN+AGWLDGPLGV+YALEAARV+N DP NGAVEVA Sbjct: 61 GIGNVFGTSTKPGPKLLAGSHLESQNYAGWLDGPLGVVYALEAARVLNADPSVNGAVEVA 120 Query: 121 AWCDEEGHFGSFLGSRSFVGAVTEADIDAARDRSSDRTMRDALRDAGFAGRPRLNAEAGR 180 AWCDEEGHFGSFLGSRS+VG VTEADID+ARDR++ R MRDAL D G AGR R+ AE GR Sbjct: 121 AWCDEEGHFGSFLGSRSYVGQVTEADIDSARDRTNGRPMRDALADMGLAGRSRITAEKGR 180 Query: 181 HVGYLEAHIEQGDMLESSGLKIGVVTSIVGIWQYRITFTGEQNHAGTTRMAVRRDAGLAL 240 HVGYLEAHIEQGD LES L +GVVTSIVGIWQYRI F GEQNHAGTTRMA R+DAGLAL Sbjct: 181 HVGYLEAHIEQGDTLESGQLAVGVVTSIVGIWQYRINFVGEQNHAGTTRMAARKDAGLAL 240 Query: 241 ARFCVAIDDSFPALSGPRTVWTTGRITLDPGAPSIIPGHADMLFQIRDDNSEVIARLEQQ 300 A+FCVAID+ FPA GPRTVWTTGRITLDPGAPSIIPG A+MLFQIRDDN VIARLE+ Sbjct: 241 AKFCVAIDERFPAACGPRTVWTTGRITLDPGAPSIIPGGAEMLFQIRDDNPAVIARLEEL 300 Query: 301 LHRLATEATAQGRCGVKVERIRTGVPAMMTPAFQDAIEAASAACAGGKSIRMPSGAGHDA 360 L ++ E A G C V VE+IRTG PA+M FQDAI+AAS A AGG+SIRMPSGAGHDA Sbjct: 301 LKAMSDEVNASGPCSVTVEKIRTGAPALMDSGFQDAIDAASKAVAGGRSIRMPSGAGHDA 360 Query: 361 QVLATIMPAAMLFVPSIGGISHHWSENTDEADIVTGAEVFVETCRRLLAG 410 Q+LATIMPA MLFVPSIGGISHHW+ENT +ADIVTGA+VFV+ CRR+L G Sbjct: 361 QMLATIMPAGMLFVPSIGGISHHWTENTADADIVTGAQVFVDACRRILGG 410 >ref|YP_001203165.1| allantoate amidohydrolase [Bradyrhizobium sp. ORS 278] emb|CAL74928.1| Putative N-carbamoyl-L-amino acid hydrolase(L-carbamoylase) [Bradyrhizobium sp. ORS 278] Length = 419 Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/404 (79%), Positives = 350/404 (86%) Query: 7 RFDGKRVLADLNALRAIGAYKTGVHKPTFSEPHLRSLDWLAARLPDADLTATIDGIGNVL 66 R DG RVLADLNALRA G YKTGVH+PTFS+ H +SL WLAARLPDA LT IDGIGNVL Sbjct: 14 RADGARVLADLNALRAFGTYKTGVHRPTFSDAHRQSLHWLAARLPDAQLTPEIDGIGNVL 73 Query: 67 GSSAKAGPKLLAGSHLESQNHAGWLDGPLGVIYALEAARVINTDPDANGAVEVAAWCDEE 126 G+SAK GPKLLAGSHLESQN+AGWLDGPLGV+YALEAARV+N DP GAVEVA+WCDEE Sbjct: 74 GTSAKPGPKLLAGSHLESQNYAGWLDGPLGVVYALEAARVLNADPSIAGAVEVASWCDEE 133 Query: 127 GHFGSFLGSRSFVGAVTEADIDAARDRSSDRTMRDALRDAGFAGRPRLNAEAGRHVGYLE 186 GHFG+FLGSRS+VG V+EADIDAARDRSS RTMR+AL + AGRPRL+A GRH+GYLE Sbjct: 134 GHFGAFLGSRSYVGDVSEADIDAARDRSSPRTMREALAEMSLAGRPRLHAARGRHIGYLE 193 Query: 187 AHIEQGDMLESSGLKIGVVTSIVGIWQYRITFTGEQNHAGTTRMAVRRDAGLALARFCVA 246 AHIEQGD LE LK+G+VTSIVGIWQYRI FTG QNHAGTTRMAVR+DAGLALA+FCVA Sbjct: 194 AHIEQGDTLEQGALKVGIVTSIVGIWQYRIVFTGAQNHAGTTRMAVRKDAGLALAKFCVA 253 Query: 247 IDDSFPALSGPRTVWTTGRITLDPGAPSIIPGHADMLFQIRDDNSEVIARLEQQLHRLAT 306 ID FP+ GPRTVWTTGRITLDPGAPSIIPG A+MLFQIRDDN VI RLE L LA Sbjct: 254 IDAHFPSACGPRTVWTTGRITLDPGAPSIIPGQAEMLFQIRDDNPAVIDRLEALLRELAA 313 Query: 307 EATAQGRCGVKVERIRTGVPAMMTPAFQDAIEAASAACAGGKSIRMPSGAGHDAQVLATI 366 +ATA G C V VERIRTG PAMM FQDAIEAAS A A GKS+RMPSGAGHDAQVLATI Sbjct: 314 QATAAGPCPVVVERIRTGAPAMMDDRFQDAIEAASGALADGKSLRMPSGAGHDAQVLATI 373 Query: 367 MPAAMLFVPSIGGISHHWSENTDEADIVTGAEVFVETCRRLLAG 410 MPAAMLFVPSIGGISHHW+ENT +ADIVTGA+VFV+TCRRLLAG Sbjct: 374 MPAAMLFVPSIGGISHHWTENTSDADIVTGADVFVDTCRRLLAG 417 >ref|YP_002498921.1| allantoate amidohydrolase [Methylobacterium nodulans ORS 2060] gb|ACL58618.1| amidase, hydantoinase/carbamoylase family [Methylobacterium nodulans ORS 2060] Length = 400 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 216/404 (53%), Positives = 270/404 (66%), Gaps = 10/404 (2%) Query: 8 FDGKRVLADLNALRAIGAYKTGVHKPTFSEPHLRSLDWLAARLPDADLTATIDGIGNVLG 67 D L DL+ LR IG +KTGVH+PT+S +++ WL RL L A+IDG+G VLG Sbjct: 4 IDTDAFLRDLHELRTIGRFKTGVHRPTYSPQDMQARRWLMDRLESCGLEASIDGVGTVLG 63 Query: 68 SSAKAGPKLLAGSHLESQNHAGWLDGPLGVIYALEAARVINTDPDANGAVEVAAWCDEEG 127 GP LL GSH+ESQN AGWLDG LGV+ + AR A V+V A+ DEEG Sbjct: 64 RHRGPGPHLLVGSHIESQNEAGWLDGALGVVAGVALAR-------AGLPVDVCAFADEEG 116 Query: 128 HFG-SFLGSRSFVGAVTEADIDAARDRSSDRTMRDALRDAGFAGRPRLNAEAGRHVGYLE 186 HF FLGSRS +G V+EA+ID AR+RS +R+AL AG AG PR+ + R+ G+LE Sbjct: 117 HFDVGFLGSRSAIGEVSEAEIDRARNRSDGTPLREALAQAGLAGLPRMRLDPARYRGFLE 176 Query: 187 AHIEQGDMLESSGLKIGVVTSIVGIWQYRITFTGEQNHAGTTRMAVRRDAGLALARFCVA 246 HIEQG LE +GL +G+VT IV IWQ+RI G+Q+HAG T MA RRDAGL R A Sbjct: 177 MHIEQGTQLERAGLHLGIVTGIVAIWQWRIVIEGQQDHAGGTTMAERRDAGLTAVRLLAA 236 Query: 247 IDDSFPALSGPRTVWTTGRITLDPGAPSIIPGHADMLFQIRDDNSEVIARLEQQLHRLAT 306 ID +FP + G R+ WTTGRITLDPGAPSIIPG A++LFQ RD ++EV+ R+E +L L Sbjct: 237 IDAAFPRVCGERSTWTTGRITLDPGAPSIIPGRAEVLFQFRDVSAEVLERMEAELRALIR 296 Query: 307 EATAQGRCGVKVERIRTGVPAMMTPAFQDAI-EAASAACAGGKSIRMPSGAGHDAQVLAT 365 E+ + RC + + VPA+ PA A+ EAA A C GG MPSGAGHDAQ +A Sbjct: 297 ESNRRERCPAVLVAVSRAVPALCDPALMRALSEAAEALCPGGWQA-MPSGAGHDAQNMAR 355 Query: 366 IMPAAMLFVPSIGGISHHWSENTDEADIVTGAEVFVETCRRLLA 409 +MP+AMLFVPSIGGISHHW+E+T EAD+ G V + RR+LA Sbjct: 356 VMPSAMLFVPSIGGISHHWAEDTHEADLALGVRVLGDAARRILA 399 >ref|YP_001769429.1| allantoate amidohydrolase [Methylobacterium sp. 4-46] gb|ACA16995.1| amidase, hydantoinase/carbamoylase family [Methylobacterium sp. 4-46] Length = 403 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 217/405 (53%), Positives = 266/405 (65%), Gaps = 10/405 (2%) Query: 8 FDGKRVLADLNALRAIGAYKTGVHKPTFSEPHLRSLDWLAARLPDADLTATIDGIGNVLG 67 D L DL+ALRAIG +KTGVH+PT+S + + WLA RL + L ATIDG+G VLG Sbjct: 5 IDTDAFLRDLHALRAIGRFKTGVHRPTYSPEDMEARRWLADRLTECGLDATIDGLGTVLG 64 Query: 68 SSAKAGPKLLAGSHLESQNHAGWLDGPLGVIYALEAARVINTDPDANGAVEVAAWCDEEG 127 GP LL GSH+ESQN AGWLDG LGV+ L AR A V+V A+ DEEG Sbjct: 65 RHPGPGPHLLVGSHIESQNEAGWLDGALGVVAGLALAR-------AGLPVDVCAFADEEG 117 Query: 128 HFG-SFLGSRSFVGAVTEADIDAARDRSSDRTMRDALRDAGFAGRPRLNAEAGRHVGYLE 186 HF FLGSR+ +G V+EA+ID AR+R+ +R AL AG AGRPRL + R+ G+LE Sbjct: 118 HFDVGFLGSRAALGEVSEAEIDGARNRTDGTPLRAALERAGLAGRPRLRLDPARYRGFLE 177 Query: 187 AHIEQGDMLESSGLKIGVVTSIVGIWQYRITFTGEQNHAGTTRMAVRRDAGLALARFCVA 246 HIEQG LE +GL +G+VT IV IWQYRI G Q+HAG T MA RRDAGL R A Sbjct: 178 LHIEQGTQLERAGLHLGIVTGIVAIWQYRIVVEGRQDHAGGTTMAERRDAGLTAVRLLAA 237 Query: 247 IDDSFPALSGPRTVWTTGRITLDPGAPSIIPGHADMLFQIRDDNSEVIARLEQQLHRLAT 306 ID +FP + G + WTTGRI LDPGAPSIIPG A++LFQ RD ++ V+ R+E +L L Sbjct: 238 IDAAFPRVCGEASTWTTGRIALDPGAPSIIPGRAEVLFQFRDVSTAVLERMEAELRALIR 297 Query: 307 EATAQGRCGVKVERIRTGVPAMMTPAFQDAI-EAASAACAGGKSIRMPSGAGHDAQVLAT 365 E+ + RC V++ + VPA P A+ EAA C GG MPSGAGHDAQ +A Sbjct: 298 ESNRRERCAVELVTVSRAVPAACDPGLMRALSEAAEEVCPGGWRT-MPSGAGHDAQNMAR 356 Query: 366 IMPAAMLFVPSIGGISHHWSENTDEADIVTGAEVFVETCRRLLAG 410 MPAAMLFVPSIGGISHHW+E+T E+D+V G RR++ G Sbjct: 357 AMPAAMLFVPSIGGISHHWAEDTAESDLVLGLRALDGAARRIMQG 401