BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0078.p (268 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771031.1| hypothetical protein bll4391 [Bradyrhizobium ja... 398 e-109 ref|YP_001239992.1| hypothetical protein BBta_4020 [Bradyrhizobi... 364 6e-99 ref|YP_001205597.1| hypothetical protein BRADO3592 [Bradyrhizobi... 353 2e-95 ref|YP_577549.1| hypothetical protein Nham_2297 [Nitrobacter ham... 306 2e-81 ref|ZP_08111317.1| hypothetical protein DND132_1996 [Desulfovibr... 80 2e-13 >ref|NP_771031.1| hypothetical protein bll4391 [Bradyrhizobium japonicum USDA 110] dbj|BAC49656.1| bll4391 [Bradyrhizobium japonicum USDA 110] Length = 346 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 201/269 (74%), Positives = 231/269 (85%), Gaps = 1/269 (0%) Query: 1 MLLLESLPTVIGAAAIAPALLVLWLVIAADERPGPPVQVWLAFVLGAASISLLGLARIPF 60 M L+E+LPTVIG AAIAPALL+LWLVIAA+ERPGPP QVW AF+LGAASISLLGLAR PF Sbjct: 1 MYLIEALPTVIGTAAIAPALLMLWLVIAAEERPGPPAQVWTAFLLGAASISLLGLARAPF 60 Query: 61 NALLAIPDNPWATQAVRAAFGVAAPEEIVKVLVIVAIS-TRRRAFADPMDTVVYGAAAGL 119 ++A PDNPWA A+ + FGVA PEE VKV+ IV +S T+RR FA+PMDTVVYGAA GL Sbjct: 61 AKMVAAPDNPWAALAMHSIFGVALPEEAVKVVAIVLVSSTKRRTFANPMDTVVYGAAVGL 120 Query: 120 GFAAYENLAYLVQHKDMWRALAALRSVLTVPFHGALGIIAGAYLAIARSGGALGAYRGHR 179 GFAAYENLAYLVQH +MWR+LAALRSVLTVPFHGALGIIAGAYL IAR+G ALGA R HR Sbjct: 121 GFAAYENLAYLVQHAEMWRSLAALRSVLTVPFHGALGIIAGAYLTIARAGTALGANRHHR 180 Query: 180 DWARITNWALVLVAPVALHAAFDFPLLALQRIPDLGSTTRLLLGSASVLIGFSSIGFAIR 239 DWAR+++ L+ P+ALH+AFDFPLL LQR+PDL T R+ LG+AS+L+GFSSI FAIR Sbjct: 181 DWARLSSRLLIFAGPLALHSAFDFPLLTLQRMPDLDPTLRMWLGAASLLVGFSSIAFAIR 240 Query: 240 LVHRLGKHHAPRTDIARERLSQLRRMWAC 268 LV R+ +HHAPRTD+ARERLSQLRRMWA Sbjct: 241 LVRRVARHHAPRTDVARERLSQLRRMWAL 269 >ref|YP_001239992.1| hypothetical protein BBta_4020 [Bradyrhizobium sp. BTAi1] gb|ABQ36086.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 335 Score = 364 bits (935), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 184/266 (69%), Positives = 215/266 (80%) Query: 1 MLLLESLPTVIGAAAIAPALLVLWLVIAADERPGPPVQVWLAFVLGAASISLLGLARIPF 60 M L+E++PTVIG AAIAPALL+LWLV+AA + GPP+++W AF+LGAAS+ LLG+ R PF Sbjct: 1 MNLIEAIPTVIGTAAIAPALLILWLVVAAGDNAGPPLKIWTAFLLGAASVLLLGIVRAPF 60 Query: 61 NALLAIPDNPWATQAVRAAFGVAAPEEIVKVLVIVAISTRRRAFADPMDTVVYGAAAGLG 120 + DNPW Q VRA FGV+ PEEI K+ VI A+S+RRR F + MDTV YGAA GLG Sbjct: 61 RDVGLQLDNPWMAQLVRAIFGVSIPEEIAKIAVIAAMSSRRRQFGNAMDTVFYGAAVGLG 120 Query: 121 FAAYENLAYLVQHKDMWRALAALRSVLTVPFHGALGIIAGAYLAIARSGGALGAYRGHRD 180 FAAYENLAYLVQH +MWR+LA LRS+LTVPFHGALGIIAGAYLAIAR+G ALGA+R +RD Sbjct: 121 FAAYENLAYLVQHAEMWRSLAVLRSILTVPFHGALGIIAGAYLAIARTGTALGAHRHNRD 180 Query: 181 WARITNWALVLVAPVALHAAFDFPLLALQRIPDLGSTTRLLLGSASVLIGFSSIGFAIRL 240 WAR ++W LVL APVALHAAFD+PLL LQR L T RL LG SVLIGFSSI A+RL Sbjct: 181 WARWSSWVLVLAAPVALHAAFDYPLLMLQRGSGLDPTARLWLGGVSVLIGFSSIALAVRL 240 Query: 241 VHRLGKHHAPRTDIARERLSQLRRMW 266 V R+ +HH PRTD+AR RLSQLRRMW Sbjct: 241 VRRVARHHTPRTDVARARLSQLRRMW 266 >ref|YP_001205597.1| hypothetical protein BRADO3592 [Bradyrhizobium sp. ORS 278] emb|CAL77371.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 342 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 180/266 (67%), Positives = 212/266 (79%) Query: 1 MLLLESLPTVIGAAAIAPALLVLWLVIAADERPGPPVQVWLAFVLGAASISLLGLARIPF 60 M LLE+L TV+G AAIAPALL+LWLV+AA + GPP+++W AF+LGAAS+ LLG+ R PF Sbjct: 8 MNLLEALATVVGTAAIAPALLILWLVVAAGDNSGPPLKIWTAFLLGAASVLLLGIVRAPF 67 Query: 61 NALLAIPDNPWATQAVRAAFGVAAPEEIVKVLVIVAISTRRRAFADPMDTVVYGAAAGLG 120 + +NPW QAVRA F VA PEEI KV VI + +RRR + MDTV YGAA GLG Sbjct: 68 QNVGLGIENPWLAQAVRALFSVALPEEIAKVAVIAVLWSRRRQVGNAMDTVFYGAAVGLG 127 Query: 121 FAAYENLAYLVQHKDMWRALAALRSVLTVPFHGALGIIAGAYLAIARSGGALGAYRGHRD 180 FAAYENLAYLVQH +MWR+LA LRSVLTVPFHGALGIIAGAYLAIAR+ ALGA R +RD Sbjct: 128 FAAYENLAYLVQHAEMWRSLAILRSVLTVPFHGALGIIAGAYLAIARTSTALGANRHNRD 187 Query: 181 WARITNWALVLVAPVALHAAFDFPLLALQRIPDLGSTTRLLLGSASVLIGFSSIGFAIRL 240 WAR+++WALVL APV LHAAFD+PLL LQR +L T+RL LG+ SVLIGFSSI A+RL Sbjct: 188 WARMSSWALVLAAPVMLHAAFDYPLLLLQRASNLDPTSRLWLGAVSVLIGFSSIALAVRL 247 Query: 241 VHRLGKHHAPRTDIARERLSQLRRMW 266 V R+ HH PRT++A+ RLSQLRRMW Sbjct: 248 VRRVAHHHTPRTEMAKARLSQLRRMW 273 >ref|YP_577549.1| hypothetical protein Nham_2297 [Nitrobacter hamburgensis X14] gb|ABE63089.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 355 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 178/267 (66%), Positives = 213/267 (79%) Query: 1 MLLLESLPTVIGAAAIAPALLVLWLVIAADERPGPPVQVWLAFVLGAASISLLGLARIPF 60 M LLE+ PTVIGAAAIAPALL+LWLVIAA+ERPGPP VW AFVLGA SISLLG AR PF Sbjct: 1 MHLLETFPTVIGAAAIAPALLLLWLVIAANERPGPPAMVWAAFVLGAVSISLLGFARAPF 60 Query: 61 NALLAIPDNPWATQAVRAAFGVAAPEEIVKVLVIVAISTRRRAFADPMDTVVYGAAAGLG 120 +L +P+ PW +++ FG+AAPEE+VK+ I A++ RR +DPMD VVYGAAAGLG Sbjct: 61 APMLNVPEPPWLALMLQSVFGIAAPEELVKIAAIAAVTAMRRKSSDPMDAVVYGAAAGLG 120 Query: 121 FAAYENLAYLVQHKDMWRALAALRSVLTVPFHGALGIIAGAYLAIARSGGALGAYRGHRD 180 FAAYENLAYLVQH D+WR+LA LRSVLTVPFHGALG+IAGAY+AIARSG ALGA+R RD Sbjct: 121 FAAYENLAYLVQHADIWRSLAVLRSVLTVPFHGALGVIAGAYIAIARSGTALGAHRHARD 180 Query: 181 WARITNWALVLVAPVALHAAFDFPLLALQRIPDLGSTTRLLLGSASVLIGFSSIGFAIRL 240 WARI N + P+ALHA+FD PLLALQ+ PDL ++ LL +A++L+GF +I FA L Sbjct: 181 WARIRNRVAIFAVPIALHASFDAPLLALQQHPDLNGSSAFLLEAAAMLVGFGAILFAAYL 240 Query: 241 VHRLGKHHAPRTDIARERLSQLRRMWA 267 V R+G HHAPR++ +RERL LR MWA Sbjct: 241 VRRVGAHHAPRSETSRERLRNLRGMWA 267 >ref|ZP_08111317.1| hypothetical protein DND132_1996 [Desulfovibrio sp. ND132] gb|EGB15202.1| hypothetical protein DND132_1996 [Desulfovibrio desulfuricans ND132] Length = 345 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 19/193 (9%) Query: 15 AIAPALLVLWLVIAADERPGPPVQVWLAFVLGAASISLLGLARI-PFNALLA--IP-DNP 70 A+ P+ ++LWL +++D+ P P + +F+LG + +LG+ + PF +L+A +P DNP Sbjct: 9 AVVPSAVLLWLFVSSDKYPEPAGALVSSFLLGV--LIVLGIYLLFPFLSLVASGLPADNP 66 Query: 71 WATQAVRAAFGVAAPEEIVKVLVIVAISTRRRAFADPMDTVVYGAAAGLGFAAYENLAYL 130 + A A A PEE +K +V+ AF +PMD +VYG LGFA ENL Y+ Sbjct: 67 YIVGASHAFLMAALPEEALKFIVLRRYCVNHPAFDEPMDGIVYGVTVSLGFATAENLLYV 126 Query: 131 VQHKDMWRALAALRSVLTVPFHGALGIIAGAYLAIARSGGALGAYRGHRDWARITNWALV 190 + D +A R+ L VP H +G + G ++ G RG R + Sbjct: 127 L---DGGLHVAVGRAFLAVPCHALVGAVMGYHV------GQAAFSRGERSGLYVK----A 173 Query: 191 LVAPVALHAAFDF 203 L+ + H +DF Sbjct: 174 LLLSILFHGLYDF 186