BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0115.0077.p         (77 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771031.1| hypothetical protein bll4391 [Bradyrhizobium ja...   105   2e-21
ref|YP_001205597.1| hypothetical protein BRADO3592 [Bradyrhizobi...    77   8e-13
ref|YP_001239992.1| hypothetical protein BBta_4020 [Bradyrhizobi...    76   2e-12
ref|YP_577549.1| hypothetical protein Nham_2297 [Nitrobacter ham...    67   1e-09

>ref|NP_771031.1| hypothetical protein bll4391 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49656.1| bll4391 [Bradyrhizobium japonicum USDA 110]
          Length = 346

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/72 (68%), Positives = 59/72 (81%)

Query: 2   LIGGGAGFAGVSFLLTSLHHWYVNPERNASFILVPIGFTSILIGLALLIATTAVYFLGRN 61
           L GGG GF G++F+LTS+HHW +NPERN +  L+PIGF SIL+GLALLI TTA+Y LGRN
Sbjct: 271 LAGGGVGFLGLAFVLTSIHHWLINPERNLTLALIPIGFVSILLGLALLIVTTAIYILGRN 330

Query: 62  RMRTVSEGFPSA 73
           R+RT  EGF SA
Sbjct: 331 RIRTSGEGFSSA 342


>ref|YP_001205597.1| hypothetical protein BRADO3592 [Bradyrhizobium sp. ORS 278]
 emb|CAL77371.1| conserved hypothetical protein; putative membrane protein
           [Bradyrhizobium sp. ORS 278]
          Length = 342

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 33/59 (55%), Positives = 47/59 (79%)

Query: 9   FAGVSFLLTSLHHWYVNPERNASFILVPIGFTSILIGLALLIATTAVYFLGRNRMRTVS 67
           F G+ F+LTS+ HW +NP+RN + +LVP+G T+I++G+ALLI TT +Y  GRNRMRT +
Sbjct: 284 FIGLGFVLTSVRHWLLNPDRNIAGVLVPLGLTAIVLGVALLIVTTTIYVFGRNRMRTTA 342


>ref|YP_001239992.1| hypothetical protein BBta_4020 [Bradyrhizobium sp. BTAi1]
 gb|ABQ36086.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 335

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/59 (55%), Positives = 46/59 (77%)

Query: 9   FAGVSFLLTSLHHWYVNPERNASFILVPIGFTSILIGLALLIATTAVYFLGRNRMRTVS 67
           F G+ F+LTS+ HW +NP+RN + +LVP+G T+IL+G ALLI TT +Y  GRNR+RT +
Sbjct: 277 FIGLGFVLTSVRHWLLNPDRNVAGVLVPLGLTAILLGAALLIVTTTIYIFGRNRIRTTA 335


>ref|YP_577549.1| hypothetical protein Nham_2297 [Nitrobacter hamburgensis X14]
 gb|ABE63089.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 355

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 48/76 (63%)

Query: 2   LIGGGAGFAGVSFLLTSLHHWYVNPERNASFILVPIGFTSILIGLALLIATTAVYFLGRN 61
           L GGGA F G +F+L+S+  W  + +++ +  LVP+G  +I+IG+ LL+ T+AVY LGRN
Sbjct: 270 LAGGGASFLGAAFILSSIDRWITDADKHIATYLVPVGIVAIVIGIWLLVMTSAVYVLGRN 329

Query: 62  RMRTVSEGFPSAPSQS 77
           R++         P Q 
Sbjct: 330 RLQMTGTSPVFDPDQD 345