BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0069.p (207 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001239986.1| putative lysyl-tRNA synthetase (lysine--tRNA... 297 8e-79 ref|YP_001205592.1| putative lysyl-tRNA synthetase [Bradyrhizobi... 291 3e-77 ref|NP_771027.1| lysyl-tRNA synthetase [Bradyrhizobium japonicum... 291 4e-77 ref|YP_577553.1| lysine--tRNA ligase [Nitrobacter hamburgensis X... 269 1e-70 ref|ZP_08630025.1| lysyl-tRNA synthetase-related protein [Bradyr... 265 3e-69 >ref|YP_001239986.1| putative lysyl-tRNA synthetase (lysine--tRNA ligase) [Bradyrhizobium sp. BTAi1] gb|ABQ36080.1| Putative lysyl-tRNA synthetase (Lysine--tRNA ligase) [Bradyrhizobium sp. BTAi1] Length = 351 Score = 297 bits (760), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 144/175 (82%), Positives = 155/175 (88%) Query: 1 MTAHDRPSPWWTPQRYADRRPFLQARTAITRAVRAWFEEQGFAEVETAILQISPGNETHL 60 M+ +PSPWW+PQR+AD RPFLQAR AI RAVRAWF EQGF EVET ILQ+SPGNETHL Sbjct: 2 MSGEPKPSPWWSPQRHADVRPFLQARAAIMRAVRAWFAEQGFTEVETGILQVSPGNETHL 61 Query: 61 HAPRTELRQADGSLAPRYLRTSPEFACKKLLAAGEPKIYEFARVFRDRERGDLHLPEFTM 120 HAP TEL ADG+ RYLRTSPEFACKKLLAAGE +I+EFARVFRDRERGDLHLPEFTM Sbjct: 62 HAPATELTGADGTRLKRYLRTSPEFACKKLLAAGERRIFEFARVFRDRERGDLHLPEFTM 121 Query: 121 LEWYRANAGYDAIMADTIVVIAHAAQATGIGRFSFRGRTADPFAEPELLTVAAAF 175 LEWYRA A YDAIMAD +V+IAHAAQATGI +FSFRGRTADPFAEPELLTVAAAF Sbjct: 122 LEWYRAEAPYDAIMADAVVLIAHAAQATGIQQFSFRGRTADPFAEPELLTVAAAF 176 >ref|YP_001205592.1| putative lysyl-tRNA synthetase [Bradyrhizobium sp. ORS 278] emb|CAL77366.1| Putative lysyl-tRNA synthetase (Lysine--tRNA ligase) [Bradyrhizobium sp. ORS 278] Length = 351 Score = 291 bits (746), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 143/176 (81%), Positives = 155/176 (88%), Gaps = 1/176 (0%) Query: 7 PSPWWTPQRYADRRPFLQARTAITRAVRAWFEEQGFAEVETAILQISPGNETHLHAPRTE 66 PSPWW+PQR+AD RPFLQAR AITRA+R WFEEQGF EVET ILQ+SPGNETHLHAP T Sbjct: 8 PSPWWSPQRHADVRPFLQARAAITRALRGWFEEQGFTEVETGILQLSPGNETHLHAPATA 67 Query: 67 LRQADGSLAPRYLRTSPEFACKKLLAAGEPKIYEFARVFRDRERGDLHLPEFTMLEWYRA 126 L ADG RYLRTSPEFACKKLLAAGE +I+EFARVFRDRERGDLHLPEFTMLEWYRA Sbjct: 68 LMAADGVQHKRYLRTSPEFACKKLLAAGERRIFEFARVFRDRERGDLHLPEFTMLEWYRA 127 Query: 127 NAGYDAIMADTIVVIAHAAQATGIGRFSFRGRTADPFAEPELLTVAAAFDXRHRSV 182 A YDAIMADT+VVIAHAAQATGI +F+FRGRTADP+AEPELLTVA AF+ RH + Sbjct: 128 EAPYDAIMADTVVVIAHAAQATGIRQFAFRGRTADPYAEPELLTVAGAFE-RHAGI 182 >ref|NP_771027.1| lysyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] dbj|BAC49652.1| lysyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] Length = 354 Score = 291 bits (745), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 146/202 (72%), Positives = 166/202 (82%), Gaps = 6/202 (2%) Query: 3 AHDRP-SPWWTPQRYADRRPFLQARTAITRAVRAWFEEQGFAEVETAILQISPGNETHLH 61 A D+P SP+W+P+R+ DRRPFLQAR A+T A+R +F EQGF EVET++LQ+SPGNETHLH Sbjct: 2 AGDKPISPFWSPERHLDRRPFLQARGAVTGALRGFFAEQGFMEVETSVLQVSPGNETHLH 61 Query: 62 APRTELRQADGSLAPRYLRTSPEFACKKLLAAGEPKIYEFARVFRDRERGDLHLPEFTML 121 APRTE+ + DGS A RYLRTSPEFACKKLLAAGEP+I+EFARVFRDRERGDLHLPEFTML Sbjct: 62 APRTEIVRPDGSRASRYLRTSPEFACKKLLAAGEPRIFEFARVFRDRERGDLHLPEFTML 121 Query: 122 EWYRANAGYDAIMADTIVVIAHAAQATGIGRFSFRGRTADPFAEPELLTVAAAFD----- 176 EWYRA A YDAIMADT+VVIA AAQATGIG FSFRGRTADPFAEPELLTVA AF+ Sbjct: 122 EWYRAGAPYDAIMADTVVVIARAAQATGIGTFSFRGRTADPFAEPELLTVAGAFERFAGI 181 Query: 177 XRHRSVADDHGRRGRSRGACGG 198 +++ D G R GG Sbjct: 182 DLLSTISGDEGNRAALAQMAGG 203 >ref|YP_577553.1| lysine--tRNA ligase [Nitrobacter hamburgensis X14] gb|ABE63093.1| Lysine--tRNA ligase [Nitrobacter hamburgensis X14] Length = 345 Score = 269 bits (688), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 133/172 (77%), Positives = 141/172 (81%) Query: 5 DRPSPWWTPQRYADRRPFLQARTAITRAVRAWFEEQGFAEVETAILQISPGNETHLHAPR 64 +R SPWW R+ADRR FLQAR A+TRA+RAWF+ QGF EVET +LQ SPGNETHLHAPR Sbjct: 2 NRISPWWDRARHADRRAFLQARVAVTRALRAWFDAQGFVEVETGVLQASPGNETHLHAPR 61 Query: 65 TELRQADGSLAPRYLRTSPEFACKKLLAAGEPKIYEFARVFRDRERGDLHLPEFTMLEWY 124 T L G RYLRTSPEFACKKLLAAGE K+ EFARVFRDRERGDLHL EFTMLEWY Sbjct: 62 TTLTSPAGDQVTRYLRTSPEFACKKLLAAGEQKVVEFARVFRDRERGDLHLAEFTMLEWY 121 Query: 125 RANAGYDAIMADTIVVIAHAAQATGIGRFSFRGRTADPFAEPELLTVAAAFD 176 RA YD IMAD I VIA AA+ATGIG FSFRGR ADPFAEPELLTVAAAFD Sbjct: 122 RAGRSYDVIMADCIAVIARAAKATGIGAFSFRGRHADPFAEPELLTVAAAFD 173 >ref|ZP_08630025.1| lysyl-tRNA synthetase-related protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07394.1| lysyl-tRNA synthetase-related protein [Bradyrhizobiaceae bacterium SG-6C] Length = 350 Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 136/196 (69%), Positives = 147/196 (75%), Gaps = 7/196 (3%) Query: 1 MTAHDRPSPWWTPQRYADRRPFLQARTAITRAVRAWFEEQGFAEVETAILQISPGNETHL 60 M A SPWWTP R+ DR+PFLQAR A+TRA RAWF +GF EVET ILQ SPGNETHL Sbjct: 1 MNAGQELSPWWTPDRHHDRKPFLQARNAVTRATRAWFAGEGFTEVETGILQKSPGNETHL 60 Query: 61 HAPRTELRQADGSLAPRYLRTSPEFACKKLLAAGEPKIYEFARVFRDRERGDLHLPEFTM 120 HAP +L G YLRTSPEFACKKLLA+GE KI EFARVFRDRERG LHLPEFTM Sbjct: 61 HAPFADLTSGSGERTRCYLRTSPEFACKKLLASGETKIVEFARVFRDRERGPLHLPEFTM 120 Query: 121 LEWYRANAGYDAIMADTIVVIAHAAQATGIGRFSFRGRTADPFAEPELLTVAAAFDXRHR 180 LEWYRAN Y+A+MAD +VVIA AAQ TGIG FSF GRTADPFA PELLTVA AF R+ Sbjct: 121 LEWYRANESYEAVMADCVVVIARAAQETGIGTFSFLGRTADPFATPELLTVADAF-SRYA 179 Query: 181 S------VADDHGRRG 190 S + D HG RG Sbjct: 180 SIDLLATIVDGHGLRG 195