BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0058.p (283 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769281.1| hypothetical protein blr2641 [Bradyrhizobium ja... 484 e-135 ref|YP_779995.1| hypothetical protein RPE_1061 [Rhodopseudomonas... 427 e-117 ref|YP_001238544.1| hypothetical protein BBta_2473 [Bradyrhizobi... 426 e-117 ref|ZP_08628760.1| metal ion dependent adhesion motif-containing... 421 e-116 ref|YP_001204244.1| hypothetical protein BRADO2156 [Bradyrhizobi... 410 e-112 >ref|NP_769281.1| hypothetical protein blr2641 [Bradyrhizobium japonicum USDA 110] dbj|BAC47906.1| blr2641 [Bradyrhizobium japonicum USDA 110] Length = 285 Score = 484 bits (1245), Expect = e-135, Method: Compositional matrix adjust. Identities = 234/285 (82%), Positives = 260/285 (91%), Gaps = 2/285 (0%) Query: 1 MRWYVSIGAVLVAGMLASGDVAGVAAPGPGTQP--GHRLAEKESTPSVDIELIIAVDVSY 58 MR SIGAVLVAG+LA GDVAG+AAPGP +P RLA + +VD+ELI+AVDVSY Sbjct: 1 MRLLFSIGAVLVAGVLAGGDVAGIAAPGPKFEPPRTQRLAADKDAQTVDVELILAVDVSY 60 Query: 59 SMDMDELAIQREGYAQAIVSKDFLQALKAGPNGKISITYFEWAASNDQKIIIPWRVIDGP 118 SMDMDELAIQREGYAQAI SK+FLQALK GPNG+I++TYFEWAAS DQKIIIPWR+IDGP Sbjct: 61 SMDMDELAIQREGYAQAIQSKEFLQALKMGPNGRIAVTYFEWAASTDQKIIIPWRLIDGP 120 Query: 119 ESADAVAAEIMKTPVRRASRTSISGAIYFAIPMFDENPHRGLRRVIDISGDGPNNNGTPI 178 E+ADAVA EIMKTP+RRASRTSISGAI FA+P+FDE+P+RGLRRVIDISGDGPNNNG P+ Sbjct: 121 ETADAVATEIMKTPIRRASRTSISGAITFAMPLFDEDPYRGLRRVIDISGDGPNNNGGPV 180 Query: 179 TPARDAALDKGIVINGLPIMVKEPSYSTMDIENLDWYYEDCVIGGPGSFVVTIKDREKFK 238 T ARDAAL+KGIVINGLPIMVKEPSYSTMDI+NLD+YYEDCVIGGPGSFV+TIKDREKFK Sbjct: 181 TVARDAALEKGIVINGLPIMVKEPSYSTMDIDNLDYYYEDCVIGGPGSFVITIKDREKFK 240 Query: 239 EAIRTKLLLEVAGRTPERPIMRTADKEPRVNCLIGEKIWQDRWGR 283 EAIRTKLL+EVAGR PERP+MR ADKEPRV+CLIGEKIW DRWGR Sbjct: 241 EAIRTKLLMEVAGRVPERPVMRVADKEPRVSCLIGEKIWSDRWGR 285 >ref|YP_779995.1| hypothetical protein RPE_1061 [Rhodopseudomonas palustris BisA53] gb|ABJ05015.1| protein of unknown function DUF1194 [Rhodopseudomonas palustris BisA53] Length = 285 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 208/288 (72%), Positives = 245/288 (85%), Gaps = 8/288 (2%) Query: 1 MRWYVSIGAVLVAGMLASGDVAGVAAPGPGTQPGHRLAEKESTPS--VDIELIIAVDVSY 58 MRW S+G VLVA ++ GDVAG A P Q R P+ VD+EL++AVD+SY Sbjct: 1 MRWCASLGLVLVAAVMIGGDVAGNATPNALMQ---RADSNGPDPASVVDVELVLAVDISY 57 Query: 59 SMDMDELAIQREGYAQAIVSKDFLQALKAGPNGKISITYFEWAASNDQKIIIPWRVIDGP 118 SMD+DELA+QREGYA+AI SK+FLQALK+GP G+I++TYFEWAAS+DQKI++ W+VIDGP Sbjct: 58 SMDLDELALQREGYAEAIASKEFLQALKSGPTGRIAVTYFEWAASSDQKIVLAWQVIDGP 117 Query: 119 ESADAVAAEIMKTPVRRASRTSISGAIYFAIPMFDENPHRGLRRVIDISGDGPNNNGTPI 178 ESADAVAAEI+KTP+RRASRTSISGAI FA+P+ +EN + GLRRVIDISGDGPNNNG P+ Sbjct: 118 ESADAVAAEILKTPIRRASRTSISGAISFAVPLLEENAYHGLRRVIDISGDGPNNNGMPV 177 Query: 179 TPARDAALDKGIVINGLPIMVKEPSYSTMDIENLDWYYEDCVIGGPGSFVVTIKDREKFK 238 T ARDAAL+KGIVINGLPIMVKEPSYSTMDI+NLD+YYEDCVIGGPGSFVVTIKDR+KFK Sbjct: 178 TMARDAALEKGIVINGLPIMVKEPSYSTMDIDNLDYYYEDCVIGGPGSFVVTIKDRDKFK 237 Query: 239 EAIRTKLLLEVAGRTPER---PIMRTADKEPRVNCLIGEKIWQDRWGR 283 EAIRTKL++EVAGR PER P+ +EPRV+CL+GE IWQDRWGR Sbjct: 238 EAIRTKLVMEVAGRVPERRVVPVAAPEPREPRVSCLVGETIWQDRWGR 285 >ref|YP_001238544.1| hypothetical protein BBta_2473 [Bradyrhizobium sp. BTAi1] gb|ABQ34638.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 284 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 216/287 (75%), Positives = 250/287 (87%), Gaps = 7/287 (2%) Query: 1 MRWYVSIGAVLVAGMLASGDVAGVAAPGPGTQPGHRLAEKESTPSVDIELIIAVDVSYSM 60 MRW++SIG +AG LA GDVA VAA +L++K++ SVD+ELI+AVDVSYSM Sbjct: 1 MRWWISIGVACLAGALAGGDVASVAAAPGAQAA-QQLSDKDA--SVDVELILAVDVSYSM 57 Query: 61 DMDELAIQREGYAQAIVSKDFLQALKAGPNGKISITYFEWAASNDQKIIIPWRVIDGPES 120 D+DELAIQREGYAQA+ S++FLQALK G +G+I++TYFEWAAS+DQKIIIPWR+IDGPES Sbjct: 58 DLDELAIQREGYAQALSSREFLQALKNGVHGRIAVTYFEWAASSDQKIIIPWRLIDGPES 117 Query: 121 ADAVAAEIMKTPVRRASRTSISGAIYFAIPMFDENPHRGLRRVIDISGDGPNNNG-TPIT 179 ADAVAAEIMKTP+RRASRTSISGAIYFA+P+FDENP+RGLRRVIDISGDGPNNNG +P+T Sbjct: 118 ADAVAAEIMKTPIRRASRTSISGAIYFAMPLFDENPYRGLRRVIDISGDGPNNNGPSPVT 177 Query: 180 PARDAALDKGIVINGLPIMVKEPSYSTMDIENLDWYYEDCVIGGPGSFVVTIKDREKFKE 239 ARD A+ KGI INGLPIMVKEPSYSTMDIENLD YY+DCV GG GSFVVTIK R++FKE Sbjct: 178 MARDEAVAKGITINGLPIMVKEPSYSTMDIENLDLYYKDCVTGGRGSFVVTIKSRDEFKE 237 Query: 240 AIRTKLLLEVAGRTPER---PIMRTADKEPRVNCLIGEKIWQDRWGR 283 AIRTKLL+EVAGRTP P+ A+KEPRV+CLIGEKIWQDRWGR Sbjct: 238 AIRTKLLMEVAGRTPPAKIVPVADDANKEPRVSCLIGEKIWQDRWGR 284 >ref|ZP_08628760.1| metal ion dependent adhesion motif-containing protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08565.1| metal ion dependent adhesion motif-containing protein [Bradyrhizobiaceae bacterium SG-6C] Length = 277 Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust. Identities = 207/283 (73%), Positives = 239/283 (84%), Gaps = 6/283 (2%) Query: 1 MRWYVSIGAVLVAGMLASGDVAGVAAPGPGTQPGHRLAEKESTPSVDIELIIAVDVSYSM 60 MRW VSIGAVLVAGM+A GDV G+AAP + P A+ VD+ELI+AVDVSYSM Sbjct: 1 MRWCVSIGAVLVAGMVAGGDVPGLAAPAAPSVPVAAEAK------VDVELILAVDVSYSM 54 Query: 61 DMDELAIQREGYAQAIVSKDFLQALKAGPNGKISITYFEWAASNDQKIIIPWRVIDGPES 120 DMDELA+QREGYA A+ SK+FLQALK GP GK+++TYFEWAAS DQKII+PWRVIDGPES Sbjct: 55 DMDELALQREGYALAVTSKEFLQALKTGPTGKVAVTYFEWAASTDQKIIVPWRVIDGPES 114 Query: 121 ADAVAAEIMKTPVRRASRTSISGAIYFAIPMFDENPHRGLRRVIDISGDGPNNNGTPITP 180 A A+A EI+K P+RRASRTSISGAI FA+P+F+ N ++GLRRVIDISGDGPNNNG P+T Sbjct: 115 AGALAEEILKAPLRRASRTSISGAINFAMPLFEANEYQGLRRVIDISGDGPNNNGEPVTI 174 Query: 181 ARDAALDKGIVINGLPIMVKEPSYSTMDIENLDWYYEDCVIGGPGSFVVTIKDREKFKEA 240 ARDAAL KG+ INGLPIM KE +Y+TMDIENLD+YYEDCVIGGPGSFVV IK REKFKEA Sbjct: 175 ARDAALAKGLTINGLPIMAKETNYATMDIENLDFYYEDCVIGGPGSFVVPIKTREKFKEA 234 Query: 241 IRTKLLLEVAGRTPERPIMRTADKEPRVNCLIGEKIWQDRWGR 283 IRTKL++EVA R PE I+ A +EPRV+C IGEKIWQ+RWGR Sbjct: 235 IRTKLVMEVAYRAPEPRIVPAATREPRVSCTIGEKIWQERWGR 277 >ref|YP_001204244.1| hypothetical protein BRADO2156 [Bradyrhizobium sp. ORS 278] emb|CAL76007.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 259 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 204/260 (78%), Positives = 232/260 (89%), Gaps = 7/260 (2%) Query: 28 GPGTQPGHRLAEKESTPSVDIELIIAVDVSYSMDMDELAIQREGYAQAIVSKDFLQALKA 87 P QP L+EKE+ SVD+ELI+AVDVSYSMD+DELAIQREGYAQA+ S++FLQALK Sbjct: 3 APRAQPAQ-LSEKEA--SVDVELILAVDVSYSMDLDELAIQREGYAQALSSREFLQALKN 59 Query: 88 GPNGKISITYFEWAASNDQKIIIPWRVIDGPESADAVAAEIMKTPVRRASRTSISGAIYF 147 G +G+I++TYFEWAA++DQKIIIPWRVIDGPESADAVAAEIMKTP+RRASRTSISGAIYF Sbjct: 60 GVHGRIAVTYFEWAAASDQKIIIPWRVIDGPESADAVAAEIMKTPIRRASRTSISGAIYF 119 Query: 148 AIPMFDENPHRGLRRVIDISGDGPNNNG-TPITPARDAALDKGIVINGLPIMVKEPSYST 206 A+P+FDENP+RGLR+VIDISGDGPNNNG +P+T ARD A++KGI INGLPIMVKEPSYST Sbjct: 120 AMPLFDENPYRGLRKVIDISGDGPNNNGPSPVTMARDEAVNKGITINGLPIMVKEPSYST 179 Query: 207 MDIENLDWYYEDCVIGGPGSFVVTIKDREKFKEAIRTKLLLEVAGRTPERPIMRTAD--- 263 MDIENLD YY+DCV GG GSFVVTIK RE+FKEAIRTKLL+EVAGR P I+ AD Sbjct: 180 MDIENLDLYYKDCVTGGRGSFVVTIKSREEFKEAIRTKLLMEVAGRQPPPSIVPVADDGN 239 Query: 264 KEPRVNCLIGEKIWQDRWGR 283 KEPRV+CLIGEKIWQDRWGR Sbjct: 240 KEPRVSCLIGEKIWQDRWGR 259