BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0044.p (213 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_531016.1| putative xanthine dehydrogenase iron-sulfur-bin... 315 3e-84 ref|YP_002419959.1| (2Fe-2S)-binding domain-containing protein [... 314 6e-84 ref|YP_004444403.1| putative xanthine dehydrogenase yagT iron-su... 311 5e-83 ref|YP_003067060.1| oxidoreductase, 2Fe-2S subunit [Methylobacte... 310 8e-83 ref|ZP_00209023.1| COG2080: Aerobic-type carbon monoxide dehydro... 309 2e-82 >ref|YP_531016.1| putative xanthine dehydrogenase iron-sulfur-binding subunit [Rhodopseudomonas palustris BisB18] gb|ABD86697.1| Twin-arginine translocation pathway signal [Rhodopseudomonas palustris BisB18] Length = 218 Score = 315 bits (807), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 159/222 (71%), Positives = 179/222 (80%), Gaps = 13/222 (5%) Query: 1 MQISGRLELSRRHLLIVGAASLA---------ASSIATPPPAAAQAAPTGAPVMTRVSFD 51 M G L+LSRRH+L+ A +LA A + P P A GAP + VSF Sbjct: 1 MPPFGELKLSRRHVLMATAGTLALGAMPGHARAQDLGRPTPPLA----VGAPSLANVSFT 56 Query: 52 VNGETHQLELDTRTTLLDALREHLHLTGTKKGCDHGQCGACTVLVDGRRINSCLTLAVMH 111 VNG +HQL+LDTRTTLLDALREHL+LTG+KKGCD GQCGACTV+V+GRRI SCL+LA+MH Sbjct: 57 VNGVSHQLDLDTRTTLLDALREHLNLTGSKKGCDQGQCGACTVIVEGRRIASCLSLAIMH 116 Query: 112 QGDEITTIEGLGTPDGLHPLQAAFVEHDGYQCGYCTPGQICSAVAVLAEVKAGIPSHVTA 171 QGD ITTIEGLGTPD +HP+QAAFV+HDGYQCGYCTPGQICSAVA L E+KAGIPSHVTA Sbjct: 117 QGDAITTIEGLGTPDNMHPMQAAFVKHDGYQCGYCTPGQICSAVAELDEIKAGIPSHVTA 176 Query: 172 DLNAPLRLTNAELRERMSGNICRCGAYSNIAEAISEVAGRSA 213 DL A +LTNAELRERMSGNICRCGAYSNIAEAIS+VAGR A Sbjct: 177 DLEAMPQLTNAELRERMSGNICRCGAYSNIAEAISDVAGRPA 218 >ref|YP_002419959.1| (2Fe-2S)-binding domain-containing protein [Methylobacterium chloromethanicum CM4] gb|ACK82031.1| (2Fe-2S)-binding domain protein [Methylobacterium chloromethanicum CM4] Length = 211 Score = 314 bits (804), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 153/207 (73%), Positives = 175/207 (84%), Gaps = 2/207 (0%) Query: 7 LELSRRHLLIVGAASLAASSIATPPPAAAQAAPTGAPVMTRVSFDVNGETHQLELDTRTT 66 LEL+RR L++ A+ A+ P A A+ T APV+ +VS VNG+ LELDTRT+ Sbjct: 7 LELNRRDLMV--GATATAALATVPSAAGAKPGGTDAPVLAKVSLTVNGQRRDLELDTRTS 64 Query: 67 LLDALREHLHLTGTKKGCDHGQCGACTVLVDGRRINSCLTLAVMHQGDEITTIEGLGTPD 126 LLDA EHLHLTG+KKGCDHGQCGACT++VDGRRINSCLTLAVMHQG EITTIEGLG PD Sbjct: 65 LLDAAHEHLHLTGSKKGCDHGQCGACTMIVDGRRINSCLTLAVMHQGAEITTIEGLGQPD 124 Query: 127 GLHPLQAAFVEHDGYQCGYCTPGQICSAVAVLAEVKAGIPSHVTADLNAPLRLTNAELRE 186 LHP+QAAFV+HDGYQCGYCTPGQICSAVAVLAE+KAGIPSHVTADLNAP+++T AE+RE Sbjct: 125 NLHPMQAAFVKHDGYQCGYCTPGQICSAVAVLAEIKAGIPSHVTADLNAPMQVTEAEIRE 184 Query: 187 RMSGNICRCGAYSNIAEAISEVAGRSA 213 RMSGNICRCGAYSNI EA++EV GR A Sbjct: 185 RMSGNICRCGAYSNIVEAMTEVTGRPA 211 >ref|YP_004444403.1| putative xanthine dehydrogenase yagT iron-sulfur-binding subunit [Agrobacterium sp. H13-3] gb|ADY67312.1| putative xanthine dehydrogenase yagT iron-sulfur-binding subunit [Agrobacterium sp. H13-3] Length = 212 Score = 311 bits (796), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 149/213 (69%), Positives = 174/213 (81%), Gaps = 1/213 (0%) Query: 1 MQISGRLELSRRHLLIVGAASLAASSIATPPPAAAQAAPTGAPVMTRVSFDVNGETHQLE 60 M+ LELSRR LL+ AA++A + +A AAAQ++ T VSF VNGE H LE Sbjct: 1 MRDHSHLELSRRDLLVSSAAAIAVTGVA-AKGAAAQSSGEEMNFKTSVSFKVNGEMHDLE 59 Query: 61 LDTRTTLLDALREHLHLTGTKKGCDHGQCGACTVLVDGRRINSCLTLAVMHQGDEITTIE 120 LD RT+LLDALREHLHLTGTKKGCDHGQCGACTV+VDGRRINSCLTLAVMH GDE+TTIE Sbjct: 60 LDNRTSLLDALREHLHLTGTKKGCDHGQCGACTVMVDGRRINSCLTLAVMHDGDEVTTIE 119 Query: 121 GLGTPDGLHPLQAAFVEHDGYQCGYCTPGQICSAVAVLAEVKAGIPSHVTADLNAPLRLT 180 GLG P LHP+QAAF++HDG+QCGYCTPGQICS+VAVL E+K+ IPSH TAD++A + +T Sbjct: 120 GLGQPGNLHPMQAAFIKHDGFQCGYCTPGQICSSVAVLEEIKSNIPSHATADISAKVEVT 179 Query: 181 NAELRERMSGNICRCGAYSNIAEAISEVAGRSA 213 AE+RERMSGNICRCGAYSNI +AI+EV G A Sbjct: 180 AAEVRERMSGNICRCGAYSNILDAIAEVGGIEA 212 >ref|YP_003067060.1| oxidoreductase, 2Fe-2S subunit [Methylobacterium extorquens DM4] emb|CAX23075.1| oxidoreductase, 2Fe-2S subunit [Methylobacterium extorquens DM4] Length = 196 Score = 310 bits (794), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 148/184 (80%), Positives = 165/184 (89%), Gaps = 2/184 (1%) Query: 32 PAAAQAAPTG--APVMTRVSFDVNGETHQLELDTRTTLLDALREHLHLTGTKKGCDHGQC 89 P+AA A P G APV+ +VS VNG+ LELDTRT+LLDA REHLHLTG+KKGCDHGQC Sbjct: 13 PSAAGAKPGGTDAPVLAKVSLTVNGQRRDLELDTRTSLLDAAREHLHLTGSKKGCDHGQC 72 Query: 90 GACTVLVDGRRINSCLTLAVMHQGDEITTIEGLGTPDGLHPLQAAFVEHDGYQCGYCTPG 149 GACT++VDGRRINSCLTLAVMHQG EITTIEGLG PD LHP+QAAFV+HDGYQCGYCTPG Sbjct: 73 GACTMIVDGRRINSCLTLAVMHQGAEITTIEGLGQPDNLHPMQAAFVKHDGYQCGYCTPG 132 Query: 150 QICSAVAVLAEVKAGIPSHVTADLNAPLRLTNAELRERMSGNICRCGAYSNIAEAISEVA 209 QICSAVAVLAE+KAGIPSHVTADLNAP+++T AE+RERMSGNICRCGAYSNI A++EVA Sbjct: 133 QICSAVAVLAEIKAGIPSHVTADLNAPMQVTEAEIRERMSGNICRCGAYSNIVGAMTEVA 192 Query: 210 GRSA 213 GR A Sbjct: 193 GRPA 196 >ref|ZP_00209023.1| COG2080: Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Magnetospirillum magnetotacticum MS-1] Length = 197 Score = 309 bits (791), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 147/184 (79%), Positives = 164/184 (89%), Gaps = 2/184 (1%) Query: 32 PAAAQAAPTG--APVMTRVSFDVNGETHQLELDTRTTLLDALREHLHLTGTKKGCDHGQC 89 P+AA A P G APV+ +VS VNG+ LELDTRT+LLDA EHLHLTG+KKGCDHGQC Sbjct: 14 PSAAGAKPGGTDAPVLAKVSLTVNGQRRDLELDTRTSLLDAAHEHLHLTGSKKGCDHGQC 73 Query: 90 GACTVLVDGRRINSCLTLAVMHQGDEITTIEGLGTPDGLHPLQAAFVEHDGYQCGYCTPG 149 GACT++VDGRRINSCLTLAVMHQG EITTIEGLG PD LHP+QAAFV+HDGYQCGYCTPG Sbjct: 74 GACTMIVDGRRINSCLTLAVMHQGAEITTIEGLGQPDNLHPMQAAFVKHDGYQCGYCTPG 133 Query: 150 QICSAVAVLAEVKAGIPSHVTADLNAPLRLTNAELRERMSGNICRCGAYSNIAEAISEVA 209 QICSAVAVLAE+KAGIPSHVTADLNAP+++T AE+RERMSGNICRCGAYSNI EA++EV Sbjct: 134 QICSAVAVLAEIKAGIPSHVTADLNAPMQVTEAEIRERMSGNICRCGAYSNIVEAMTEVT 193 Query: 210 GRSA 213 GR A Sbjct: 194 GRPA 197