BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0024.p (200 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768857.1| oxidoreductase with iron-sulfur subunit [Bradyr... 285 3e-75 ref|YP_001925621.1| (2Fe-2S)-binding domain-containing protein [... 262 2e-68 ref|ZP_00050313.1| COG2080: Aerobic-type carbon monoxide dehydro... 261 4e-68 ref|YP_002964039.1| oxidoreductase, 2Fe-2S subunit [methylobacte... 256 1e-66 ref|YP_001640274.1| 2Fe-2S iron-sulfur cluster binding domain-co... 256 1e-66 >ref|NP_768857.1| oxidoreductase with iron-sulfur subunit [Bradyrhizobium japonicum USDA 110] dbj|BAC47482.1| oxidoreductase with iron-sulfur subunit [Bradyrhizobium japonicum USDA 110] Length = 165 Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 136/165 (82%), Positives = 150/165 (90%) Query: 36 MNLPLSLTINGVRREIVLDDPRVTLLDLLRERLDLTGTKKGCDRGQCGACTVLVDGRRIN 95 MN +SLT+NG RR+ VLDDPRVTLLDLLRERL LTGTKKGCDRGQCGACT+LVDG+RIN Sbjct: 1 MNHSISLTVNGARRDFVLDDPRVTLLDLLRERLHLTGTKKGCDRGQCGACTILVDGKRIN 60 Query: 96 SCLALAVSHDGAEITTIEGVARGDQLHPVQAAFIAHDGFQCGFCTPGQIMSGIGLIQEGQ 155 SCLALAVSHDGA+I TIEGVARGDQLHPVQAAFIAHDGFQCGFCTPGQIMS IG+++E Q Sbjct: 61 SCLALAVSHDGADILTIEGVARGDQLHPVQAAFIAHDGFQCGFCTPGQIMSAIGMMREAQ 120 Query: 156 AGDDPERVRECMSGNLCRCGAYQGITEAVLEAQAGINATKQRRSA 200 AGDDPER+RECMSGNLCRCGAY GI +AV EAQ ++ + QRRSA Sbjct: 121 AGDDPERIRECMSGNLCRCGAYAGIVDAVREAQERMDESNQRRSA 165 >ref|YP_001925621.1| (2Fe-2S)-binding domain-containing protein [Methylobacterium populi BJ001] gb|ACB81086.1| (2Fe-2S)-binding domain protein [Methylobacterium populi BJ001] Length = 164 Score = 262 bits (669), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 128/160 (80%), Positives = 143/160 (89%) Query: 36 MNLPLSLTINGVRREIVLDDPRVTLLDLLRERLDLTGTKKGCDRGQCGACTVLVDGRRIN 95 M L+LT+NG R I LDDPRVTLLDLLRERL LTG+KKGCDRGQCGACTVLV+GRR+N Sbjct: 1 MTFHLTLTVNGESRAIDLDDPRVTLLDLLRERLGLTGSKKGCDRGQCGACTVLVNGRRVN 60 Query: 96 SCLALAVSHDGAEITTIEGVARGDQLHPVQAAFIAHDGFQCGFCTPGQIMSGIGLIQEGQ 155 +CLALAVS DGAEI TIEG+ARG+QLHPVQAAFI HDGFQCGFCTPGQIMS +GLI+EG Sbjct: 61 ACLALAVSLDGAEILTIEGLARGEQLHPVQAAFIEHDGFQCGFCTPGQIMSAVGLIREGH 120 Query: 156 AGDDPERVRECMSGNLCRCGAYQGITEAVLEAQAGINATK 195 AGDDPER+RE MSGNLCRCGAY GIT+AVLEAQA ++A + Sbjct: 121 AGDDPERIREGMSGNLCRCGAYIGITQAVLEAQARLSAEQ 160 >ref|ZP_00050313.1| COG2080: Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Magnetospirillum magnetotacticum MS-1] Length = 164 Score = 261 bits (667), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 130/165 (78%), Positives = 147/165 (89%), Gaps = 1/165 (0%) Query: 36 MNLPLSLTINGVRREIVLDDPRVTLLDLLRERLDLTGTKKGCDRGQCGACTVLVDGRRIN 95 M+ L+LT+NG R I LDDPRVT+LDLLRERL LTG+KKGCDRGQCGACTVLV+GRR+N Sbjct: 1 MSFSLTLTVNGETRAIDLDDPRVTILDLLRERLHLTGSKKGCDRGQCGACTVLVNGRRVN 60 Query: 96 SCLALAVSHDGAEITTIEGVARGDQLHPVQAAFIAHDGFQCGFCTPGQIMSGIGLIQEGQ 155 SCLALAVS DGA++ TIEG+ARGD LHPVQAAFI HDGFQCGFCTPGQIMS +GLI+EGQ Sbjct: 61 SCLALAVSLDGADVLTIEGLARGDALHPVQAAFIDHDGFQCGFCTPGQIMSAVGLIREGQ 120 Query: 156 AGDDPERVRECMSGNLCRCGAYQGITEAVLEAQAGINATKQRRSA 200 AGDDPERVRE MSGNLCRCGAY GIT+AVLEAQA + A++Q +A Sbjct: 121 AGDDPERVREGMSGNLCRCGAYIGITQAVLEAQARL-ASEQGEAA 164 >ref|YP_002964039.1| oxidoreductase, 2Fe-2S subunit [methylobacterium extorquens AM1] gb|ACS40762.1| oxidoreductase, 2Fe-2S subunit [Methylobacterium extorquens AM1] Length = 165 Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 129/165 (78%), Positives = 140/165 (84%) Query: 36 MNLPLSLTINGVRREIVLDDPRVTLLDLLRERLDLTGTKKGCDRGQCGACTVLVDGRRIN 95 M L+LT+NG R I LDDPRVTLLDLLRERL LTG+KKGCDRGQCGACTVL++GRRIN Sbjct: 1 MTFRLTLTVNGEPRAIELDDPRVTLLDLLRERLGLTGSKKGCDRGQCGACTVLLNGRRIN 60 Query: 96 SCLALAVSHDGAEITTIEGVARGDQLHPVQAAFIAHDGFQCGFCTPGQIMSGIGLIQEGQ 155 SCLALAVS DGAE+ TIEG+A G+QLHPVQAAFI HDGFQCGFCTPGQIMS +GLI EG Sbjct: 61 SCLALAVSLDGAEVLTIEGLAVGEQLHPVQAAFIEHDGFQCGFCTPGQIMSAVGLIHEGH 120 Query: 156 AGDDPERVRECMSGNLCRCGAYQGITEAVLEAQAGINATKQRRSA 200 AGDDPERVRE MSGNLCRCGAY GITEAVL+AQA Q +A Sbjct: 121 AGDDPERVREGMSGNLCRCGAYIGITEAVLDAQARSAGVDQGEAA 165 >ref|YP_001640274.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein [Methylobacterium extorquens PA1] ref|YP_002421806.1| (2Fe-2S)-binding domain-containing protein [Methylobacterium chloromethanicum CM4] gb|ABY31203.1| (2Fe-2S)-binding domain protein [Methylobacterium extorquens PA1] gb|ACK83878.1| (2Fe-2S)-binding domain protein [Methylobacterium chloromethanicum CM4] Length = 165 Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 129/165 (78%), Positives = 141/165 (85%) Query: 36 MNLPLSLTINGVRREIVLDDPRVTLLDLLRERLDLTGTKKGCDRGQCGACTVLVDGRRIN 95 M L+LT+NG R I LDDPRVTLLDLLRERL LTG+KKGCDRGQCGACTVL++GRRIN Sbjct: 1 MTFRLTLTVNGEPRAIELDDPRVTLLDLLRERLGLTGSKKGCDRGQCGACTVLLNGRRIN 60 Query: 96 SCLALAVSHDGAEITTIEGVARGDQLHPVQAAFIAHDGFQCGFCTPGQIMSGIGLIQEGQ 155 SCLALAVS DGAE+ TIEG+A G+QLHPVQAAFI HDGFQCGFCTPGQIMS +GLI+EG Sbjct: 61 SCLALAVSLDGAEVLTIEGLAVGEQLHPVQAAFIEHDGFQCGFCTPGQIMSAVGLIREGH 120 Query: 156 AGDDPERVRECMSGNLCRCGAYQGITEAVLEAQAGINATKQRRSA 200 AGDDPERVRE MSGNLCRCGAY GITEAVL+AQA Q +A Sbjct: 121 AGDDPERVREGMSGNLCRCGAYIGITEAVLDAQARSAGVDQGEAA 165